CV712164

Overview
NameCV712164
Unique NameCV712164
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length676
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11376 contig Csv1_Contig11376:896..1571. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: WAKLQ_ARATH (Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana GN=WAKL20 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.643e-26
Identity = 61/160 (38.12%), Postives = 98/160 (61.25%), Query Frame = 1
Query:  193 DLQMATGSFNVENLLGGGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLH-LSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA 669
            ++  AT +F+ +NL+G G FG V++A   DG + A+K+   +   ++  D  +  V  + Q++H +++ L+G C +    LL+YEF  NG+L + LH  SD   KPL W  R++IA  TA  L YLH      + H+++KS+NILLD +LN ++SD GL+
Sbjct:  355 EITKATNNFSKDNLIGTGGFGEVFKAVLEDGTITAIKRAKLNN--TKGTDQILNEVRILCQVNHRSLVRLLGCCVDLELPLLIYEFIPNGTLFEHLHGSSDRTWKPLTWRRRLQIAYQTAEGLAYLHSAAQPPIYHRDVKSSNILLDEKLNAKVSDFGLS 512          
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: WAKLM_ARATH (Wall-associated receptor kinase-like 17 OS=Arabidopsis thaliana GN=WAKL17 PE=2 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 6.643e-26
Identity = 60/161 (37.27%), Postives = 97/161 (60.25%), Query Frame = 1
Query:  181 YSIADLQMATGSFNVENLLGGGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCG 663
            ++  +L+ AT +F+   +LG G  G VY+    DG+ +AVKK  S  +  +   +FI  V  +SQ++H ++++L+G C E    +LVYEF  NG+L   +H  + D+  +IW  R++IA+  A AL YLH   S  + H++IKS NILLD +   +++D G
Sbjct:  432 FTSKELEKATENFSENRVLGHGGQGTVYKGMLVDGRTVAVKK--SKVIDEDKLQEFINEVVILSQINHRHVVKLLGCCLETEVPILVYEFIINGNLFKHIHEEEADDYTMIWGMRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNILLDEKYRAKVADFG 590          
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.643e-26
Identity = 69/177 (38.98%), Postives = 104/177 (58.76%), Query Frame = 1
Query:  169 NVTSYSIADLQMATGSFNVENLLGGGTFGRVYRAQF----------ADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA 669
            N+ +++  +L+ AT +F  +NLLG G FG V++               G V+AVK++           +++  V+ + QL HPN++ LVGYC+E    LLVYEF   GSL +  HL     +PL W  R+K+A+G A+ L +LHE  S  V++++ K+ANILLD + N +LSD GLA
Sbjct:   70 NLKAFTFNELKNATKNFRQDNLLGEGGFGCVFKGWIDQTSLTASRPGSGIVVAVKQLKPEGFQGHK--EWLTEVNYLGQLSHPNLVLLVGYCAEGENRLLVYEFMPKGSLEN--HLFRRGAQPLTWAIRMKVAVGAAKGLTFLHEAKS-QVIYRDFKAANILLDADFNAKLSDFGLA 241          
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 8.676e-26
Identity = 67/193 (34.72%), Postives = 103/193 (53.37%), Query Frame = 1
Query:   91 DRHKSFDEEDFSXXXXXXXXXXXXXTNVTSYSIADLQMATGSFNVENLLGGGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA 669
            DRHK +  + F                +  ++  +LQ+AT +F+ +N+LG G FG+VY+    D   +AVK++     P      F   V  IS   H N++ L+G+C+   + LLVY F +N SL   L      +  L W +R +IALG AR  EYLHE C+  ++H+++K+AN+LLD +    + D GLA
Sbjct:  249 DRHKGYRRDVFVDVAGEVDRRIAFG-QLKRFAWRELQLATDNFSEKNVLGQGGFGKVYKGVLPDNTKVAVKRLTDFESPGGDAA-FQREVEMISVAVHRNLLRLIGFCTTQTERLLVYPFMQNLSLAHRLREIKAGDPVLDWETRKRIALGAARGFEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA 439          
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: Y2214_ARATH (Probable receptor-like protein kinase At2g21480 OS=Arabidopsis thaliana GN=At2g21480 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 8.676e-26
Identity = 57/165 (34.55%), Postives = 98/165 (59.39%), Query Frame = 1
Query:  181 YSIADLQMATGSFNVENLLGGGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASN 675
            +S+++LQ  T +F+   ++G G FG VY     DG  +A+K+ +  +   +   +F   +  +S+L H +++ L+GYC E  + +LVYE+  NG   D  HL  ++  PL W  R++I +G AR L YLH   +  ++H+++KS NILLD  L  +++D GL+ +
Sbjct:  513 FSLSELQEVTKNFDASEIIGVGGFGNVYIGTIDDGTQVAIKRGNPQS--EQGITEFHTEIQMLSKLRHRHLVSLIGYCDENAEMILVYEYMSNGPFRD--HLYGKNLSPLTWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKSTNILLDEALVAKVADFGLSKD 673          
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: IRAK1_BOVIN (Interleukin-1 receptor-associated kinase 1 OS=Bos taurus GN=IRAK1 PE=2 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 1.133e-25
Identity = 67/165 (40.61%), Postives = 99/165 (60.00%), Query Frame = 1
Query:  181 YSIADLQMATGSFNVENLLGGGTFGRVYRAQFADGKVLAVKKIDSSALP--SEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA 669
            + + ++   T  F+ E  +G G FG VYRA   +  V AVK++   A    + +   F   V  +S+  HPNI++  GYC++ G + LVY F  NGSL D LH+  +   PL W  R+ I LGTARA+++LH+  S S++H ++KS+N+LLD  L P+L D GLA
Sbjct:  200 WPLHEICQGTHDFSEELKIGEGGFGCVYRAVMRN-TVYAVKRLKEEADLEWTTVKQSFQTEVQQLSRFRHPNIVDFAGYCAQSGFYCLVYGFLPNGSLEDRLHVQTQAWPPLSWPQRLDILLGTARAIQFLHQ-DSPSLIHGDVKSSNVLLDERLMPKLGDFGLA 362          
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: Y5241_ARATH (Probable receptor-like protein kinase At5g24010 OS=Arabidopsis thaliana GN=At5g24010 PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.480e-25
Identity = 60/162 (37.04%), Postives = 94/162 (58.02%), Query Frame = 1
Query:  184 SIADLQMATGSFNVENLLGGGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA 669
            S A+LQ  T +F+   ++G G FG V+R    D   +AVK+   S    +   +F+  ++ +S++ H +++ LVGYC E  + +LVYE+   G L    HL    N PL W  R+++ +G AR L YLH   S  ++H++IKS NILLDN    +++D GL+
Sbjct:  478 SFAELQSGTNNFDRSLVIGVGGFGMVFRGSLKDNTKVAVKR--GSPGSRQGLPEFLSEITILSKIRHRHLVSLVGYCEEQSEMILVYEYMDKGPLKS--HLYGSTNPPLSWKQRLEVCIGAARGLHYLHTGSSQGIIHRDIKSTNILLDNNYVAKVADFGLS 635          
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: WAKLN_ARATH (Wall-associated receptor kinase-like 18 OS=Arabidopsis thaliana GN=WAKL18 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.480e-25
Identity = 59/161 (36.65%), Postives = 97/161 (60.25%), Query Frame = 1
Query:  181 YSIADLQMATGSFNVENLLGGGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCG 663
            ++  +L+ AT +F+   +LG G  G VY+    DG+ +AVKK  S  +  +   +FI  V  +SQ++H ++++L+G C E    +LVYEF  NG+L   +H  + D+  ++W  R++IA+  A AL YLH   S  + H++IKS NILLD +   +++D G
Sbjct:  441 FNSRELEKATENFSENRVLGHGGQGTVYKGMLVDGRTVAVKK--SKVIDEDKLQEFINEVVILSQINHRHVVKLLGCCLETEVPMLVYEFIINGNLFKHIHEEESDDYTMLWGMRLRIAVDIAGALSYLHSSASSPIYHRDIKSTNILLDEKYRAKVADFG 599          
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: WAKLA_ARATH (Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana GN=WAKL1 PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.480e-25
Identity = 59/161 (36.65%), Postives = 98/161 (60.87%), Query Frame = 1
Query:  181 YSIADLQMATGSFNVENLLGGGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCG 663
            +S  +L+ AT +F+++ +LG G  G VY+    DG ++AVK+  S  +  +  ++FI  +  +SQ++H NI++L+G C E    +LVYE+  NG L   LH  + D+  + W  R++IA+  A AL Y+H   S  + H++IK+ NILLD +   ++SD G
Sbjct:  417 FSSKELRKATDNFSIDRVLGQGGQGTVYKGMLVDGSIVAVKR--SKVVDEDKMEEFINEIVLLSQINHRNIVKLLGCCLETEVPILVYEYIPNGDLFKRLH-DESDDYTMTWEVRLRIAIEIAGALTYMHSAASFPIFHRDIKTTNILLDEKYRAKVSDFG 574          
BLAST of CV712164 vs. ExPASy Swiss-Prot
Match: WAKLB_ARATH (Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana GN=WAKL2 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.933e-25
Identity = 63/161 (39.13%), Postives = 96/161 (59.63%), Query Frame = 1
Query:  181 YSIADLQMATGSFNVENLLGGGTFGRVYRAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLSDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCG 663
            +S  +L+ AT +FN   +LG G  G VY+    DG+++AVK+  S A+  +  ++FI  V  ++Q++H NI++L+G C E    +LVYEF  NG L   LH  + D+  + W  R+ IA+  A AL YLH   S  + H++IK+ NILLD     ++SD G
Sbjct:  404 FSSHELEKATDNFNKNRVLGQGGQGTVYKGMLVDGRIVAVKR--SKAVDEDRVEEFINEVVVLAQINHRNIVKLLGCCLETEVPVLVYEFVPNGDLCKRLH-DESDDYTMTWEVRLHIAIEIAGALSYLHSAASFPIYHRDIKTTNILLDERNRAKVSDFG 561          
The following BLAST results are available for this feature:
BLAST of CV712164 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 328
Match NameE-valueIdentityDescription
WAKLQ_ARATH6.643e-2638.13Wall-associated receptor kinase-like 20 OS=Arabido... [more]
WAKLM_ARATH6.643e-2637.27Wall-associated receptor kinase-like 17 OS=Arabido... [more]
APK2A_ARATH6.643e-2638.98Protein kinase 2A, chloroplastic OS=Arabidopsis th... [more]
Y5129_ARATH8.676e-2634.72Probable LRR receptor-like serine/threonine-protei... [more]
Y2214_ARATH8.676e-2634.55Probable receptor-like protein kinase At2g21480 OS... [more]
IRAK1_BOVIN1.133e-2540.61Interleukin-1 receptor-associated kinase 1 OS=Bos ... [more]
Y5241_ARATH1.480e-2537.04Probable receptor-like protein kinase At5g24010 OS... [more]
WAKLN_ARATH1.480e-2536.65Wall-associated receptor kinase-like 18 OS=Arabido... [more]
WAKLA_ARATH1.480e-2536.65Wall-associated receptor kinase-like 1 OS=Arabidop... [more]
WAKLB_ARATH1.933e-2539.13Wall-associated receptor kinase-like 2 OS=Arabidop... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS08_0001A05_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712164 ID=CV712164; Name=CV712164; organism=Citrus sinensis; type=EST; length=676bp
CAAGAATTGAAGTCGGTACAGAGTTCCTCTTCCATCGACACAAAGACATT
TGACACTGCTGTCTCTATAAATCTACGACCCCCACCAATTGATCGTCACA
AATCATTTGATGAAGAAGACTTTTCAAAGAAGCCCATTGTCGTCAAGAAA
GCTGTTAAAGCTCCCACAAATGTAACATCATATTCTATAGCCGACCTGCA
GATGGCTACTGGCAGCTTCAATGTTGAAAACCTCCTAGGTGGGGGAACTT
TTGGACGTGTTTATCGAGCACAATTTGCCGATGGAAAGGTTCTTGCAGTG
AAGAAAATAGATTCATCTGCCCTTCCCAGTGAAATGTGTGATGATTTTAT
CGAGATGGTTTCAAACATATCCCAGCTGCATCACCCGAACATAATGGAGC
TAGTGGGTTATTGTTCGGAGTATGGACAGCACCTGCTAGTGTATGAGTTC
CGTAAAAATGGTTCACTGCACGACTTCTTGCATCTGTCGGATGAAGACAA
CAAGCCTTTGATATGGAACTCCCGTGTCAAGATTGCTTTGGGGACTGCAC
GAGCACTGGAGTACCTGCATGAAGTCTGCTCACTGTCAGTTGTTCACAAA
AATATTAAGTCGGCCAACATATTACTGGACAACGAGCTCAATCCTCAACT
TTCTGACTGTGGCCTGGCAAGCAATA
back to top