CV712163

Overview
NameCV712163
Unique NameCV712163
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length472
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: CRK35_ARATH (Putative cysteine-rich receptor-like protein kinase 35 OS=Arabidopsis thaliana GN=CRK35 PE=3 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 9.472e-20
Identity = 58/162 (35.80%), Postives = 98/162 (60.49%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNND---AGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATP--QLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            W  R  I  G AR + YLH+   L+++H+++K++NILLD ++NP+++D G+A  +   D++  N    AG+ GY +PE AM G +++KSDVYSFGV++LE+++G+K  +SS   ++ S     T   +L    +  ++VDP +   Y     +R   +  LC
Sbjct:  441 WTRRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMA-RIFGVDQSQANTRRIAGTFGYMSPEYAMRGHFSMKSDVYSFGVLVLEIISGKK--NSSFYNIDDSGSNLVTHAWRLWRNGSPLELVDPTIGESYQSSEATRCIHIALLC 599          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: Y2317_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.237e-19
Identity = 59/142 (41.55%), Postives = 81/142 (57.04%), Query Frame = -2
Query:   58 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLAS--NMPNADEALNNDAGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQ--SLVRWATPQLHDIDALAKMVDPAL 468
            W +R  IALG A  L YLH  C   ++H++IKS NIL+D      + D GLA   +MP   ++++  AGS GY APE A + +   K D+YSFGVV+LELLTG+ P       LEQ   L  W    + D    ++++DP L
Sbjct:  923 WPTRFAIALGAAEGLAYLHHDCKPRIIHRDIKSNNILIDENFEAHVGDFGLAKVIDMP-LSKSVSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELLTGKAPVQP----LEQGGDLATWTRNHIRDHSLTSEILDPYL 1059          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: Y1756_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07560 OS=Arabidopsis thaliana GN=At1g07560 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.237e-19
Identity = 58/159 (36.48%), Postives = 92/159 (57.86%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNND--AGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            W  R+ IA+  A  LEYLH  C   +VH+++KS+NILLD++L  +L+D GL+ + P  DE+  +   AG+ GY   E   + + + KSDVYSFGVV+LE++T +   D +R      +  W    L   D ++ ++DP L+G+Y   S  +  ++   C
Sbjct:  663 WVDRLNIAVDAASGLEYLHIGCKPLIVHRDVKSSNILLDDQLQAKLADFGLSRSFPIGDESHVSTLVAGTFGYLDHEYYQTNRLSEKSDVYSFGVVLLEIITNKPVIDHNRDM--PHIAEWVKLMLTRGD-ISNIMDPKLQGVYDSGSAWKALELAMTC 818          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: THE1_ARATH (Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.237e-19
Identity = 58/159 (36.48%), Postives = 86/159 (54.09%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDA--GS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            W  R++I +G AR L YLH   S S++H+++K+ NILLD  L  +++D GL+   P+ D+   + A  GS GY  PE     Q   KSDVYSFGVV++E+L  R   +   PR + ++  WA         L +++D  L G     SL +F +    C
Sbjct:  605 WKQRLEICIGAARGLHYLHTGASQSIIHRDVKTTNILLDENLVAKVADFGLSKTGPSLDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCCRPALNPVLPREQVNIAEWAM-AWQKKGLLDQIMDSNLTGKVNPASLKKFGETAEKC 762          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: CRK36_ARATH (Cysteine-rich receptor-like protein kinase 36 OS=Arabidopsis thaliana GN=CRK36 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.237e-19
Identity = 48/105 (45.71%), Postives = 71/105 (67.62%), Query Frame = -2
Query:  163 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLAS--NMPNADEALNNDAGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRK 468
            W+ R +I  G AR L YLHE   L ++H+++K++NILLD E+NP+++D G+A   NM       +   G+ GY APE    GQ++ KSDVYSFGV++LE+++G K
Sbjct:  436 WDVRYRIIEGVARGLLYLHEDSQLRIIHRDLKASNILLDAEMNPKVADFGMARLFNMDETRGETSRVVGTYGYMAPEYVRHGQFSAKSDVYSFGVMLLEMISGEK 540          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: CRK28_ARATH (Cysteine-rich receptor-like protein kinase 28 OS=Arabidopsis thaliana GN=CRK28 PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 1.237e-19
Identity = 52/144 (36.11%), Postives = 91/144 (63.19%), Query Frame = -2
Query:   58 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA----SNMPNADEALNNDAGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFD--SSRPRLEQSLVRWATPQLHDIDALAKMVDPAL 468
            W  R K+  G AR L YLHE     ++H+++K++NILLD E+NP+++D GLA    ++  +     +  AG+ GY APE A+ GQ+++K+DV+SFGV+++E++TG+   +  S+     ++L+ W      + D +  ++DP+L
Sbjct:  457 WGVRYKMIGGVARGLLYLHEDSRYRIIHRDLKASNILLDQEMNPKIADFGLAKLYDTDQTSTHRFTSKIAGTYGYMAPEYAIYGQFSVKTDVFSFGVLVIEIITGKGNNNGRSNDDEEAENLLSWVWRCWRE-DIILSVIDPSL 599          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: CRK27_ARATH (Cysteine-rich receptor-like protein kinase 27 OS=Arabidopsis thaliana GN=CRK27 PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 1.237e-19
Identity = 44/105 (41.90%), Postives = 71/105 (67.62%), Query Frame = -2
Query:  163 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLAS--NMPNADEALNNDAGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRK 468
            W  R  I +G +R L YLHE     ++H+++KS+N+LLD ++ P++SD G+A   +  N         G+ GY APE AM G++++K+DVYSFGV++LE++TG++
Sbjct:  429 WEKRYNIIVGVSRGLLYLHEGSEFPIIHRDLKSSNVLLDEQMLPKISDFGMARQFDFDNTQAVTRRVVGTYGYMAPEYAMHGRFSVKTDVYSFGVLVLEIITGKR 533          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: Y5596_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g59680 OS=Arabidopsis thaliana GN=At5g59680 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.616e-19
Identity = 58/159 (36.48%), Postives = 93/159 (58.49%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNND--AGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            W +R++IA   A  LEYLH  C+  +VH+++K+ NILLD     +L+D GL+ + P   E+  +   AG+ GY  PE   + + + KSDVYSFG+V+LE++T +   D  R R +  + +W   +L+  D +AK++D  L G Y  +S  R  ++   C
Sbjct:  676 WGTRLRIAAEAALGLEYLHIGCTPPMVHRDVKTTNILLDEHYKAKLADFGLSRSFPVGGESHVSTVIAGTPGYLDPEYYHTSRLSEKSDVYSFGIVLLEMITNQAVID--RNRRKSHITQWVGSELNGGD-IAKIMDLKLNGDYDSRSAWRALELAMSC 831          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: Y5241_ARATH (Probable receptor-like protein kinase At5g24010 OS=Arabidopsis thaliana GN=At5g24010 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.616e-19
Identity = 58/159 (36.48%), Postives = 82/159 (51.57%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADE---ALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            W  R+++ +G AR L YLH   S  ++H++IKS NILLDN    +++D GL+ + P  DE   +       GY  PE     Q   KSDVYSFGVV+ E+L  R   D    R + +L  WA  +      L ++VDP +       SL +FA+    C
Sbjct:  584 WKQRLEVCIGAARGLHYLHTGSSQGIIHRDIKSTNILLDNNYVAKVADFGLSRSGPCIDETHVSTGVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPAVDPLLVREQVNLAEWAI-EWQRKGMLDQIVDPNIADEIKPCSLKKFAETAEKC 741          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: LRKA2_ARATH (Lectin-domain containing receptor kinase A4.2 OS=Arabidopsis thaliana GN=LECRKA4.2 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.616e-19
Identity = 54/139 (38.85%), Postives = 82/139 (58.99%), Query Frame = -2
Query:   58 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAGS--GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPAL 468
            WN+R KIA G A  L YLHE     V+H++IK +N+L+++++NP+L D GLA       ++         GY APE+A +G+ +  SDV++FGV++LE+++GR+P DS        L  W   +LH    +   VDP L
Sbjct:  461 WNARFKIAKGIASGLLYLHEEWEKVVIHRDIKPSNVLIEDDMNPRLGDFGLARLYERGSQSNTTVVVGTIGYMAPELARNGKSSSASDVFAFGVLLLEIVSGRRPTDSG----TFFLADWVM-ELHARGEILHAVDPRL 594          
The following BLAST results are available for this feature:
BLAST of CV712163 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 271
Match NameE-valueIdentityDescription
CRK35_ARATH9.472e-2035.80Putative cysteine-rich receptor-like protein kinas... [more]
Y2317_ARATH1.237e-1941.55Probable leucine-rich repeat receptor-like protein... [more]
Y1756_ARATH1.237e-1936.48Probable LRR receptor-like serine/threonine-protei... [more]
THE1_ARATH1.237e-1936.48Receptor-like protein kinase THESEUS 1 OS=Arabidop... [more]
CRK36_ARATH1.237e-1945.71Cysteine-rich receptor-like protein kinase 36 OS=A... [more]
CRK28_ARATH1.237e-1936.11Cysteine-rich receptor-like protein kinase 28 OS=A... [more]
CRK27_ARATH1.237e-1941.90Cysteine-rich receptor-like protein kinase 27 OS=A... [more]
Y5596_ARATH1.616e-1936.48Probable LRR receptor-like serine/threonine-protei... [more]
Y5241_ARATH1.616e-1936.48Probable receptor-like protein kinase At5g24010 OS... [more]
LRKA2_ARATH1.616e-1938.85Lectin-domain containing receptor kinase A4.2 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001A05_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712163 ID=CV712163; Name=CV712163; organism=Citrus sinensis; type=EST; length=472bp
ACAAAGAGCAATGACATCTGCAAAACGGGAGAGAGATTTGACTGGGTAGA
GCCCTTTGAGTGCGGGATCAACCATTTTAGCAAGGGCATCAATGTCATGG
AGCTGAGGAGTTGCCCATCGAACCAAAGATTGCTCCAATCTTGGCCTCGA
GCTATCAAATGGTTTACGTCCAGTAAGAAGCTCCAGCATAACAACCCCAA
AACTGTAGACATCACTTTTTATATTATATTGACCAGACATGGCAACCTCA
GGTGCACCATATCCAGAACCAGCATCATTGTTCAATGCCTCATCTGCATT
TGGCATATTGCTTGCCAGGCCACAGTCAGAAAGTTGAGGATTGAGCTCGT
TGTCCAGTAATATGTTGGCCGACTTAATATTTTTGTGAACAACTGACAGT
GAGCAGACTTCATGCAGGTACTCCAGTGCTCGTGCAGTCCCCAAAGCAAT
CTTGACACGGGAGTTCCATATC
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