CV712163

Overview
NameCV712163
Unique NameCV712163
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length472
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: CRK12_ARATH (Putative cysteine-rich receptor-like protein kinase 12 OS=Arabidopsis thaliana GN=CRK12 PE=2 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 4.400e-17
Identity = 43/106 (40.57%), Postives = 73/106 (68.87%), Query Frame = -2
Query:  163 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNND---AGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRK 468
            W  R  I  G  R + YLH+   L+++H+++K++NILLD ++ P+++D G+A  +   D+++ N    AG+ GY  PE  + GQ+++KSDVYSFGV++LE++ G+K
Sbjct:  463 WTKRYNIIGGITRGILYLHQDSRLTIIHRDLKASNILLDADMIPKIADFGMA-RISGIDQSVANTKRIAGTFGYMPPEYVIHGQFSMKSDVYSFGVLILEIICGKK 567          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 5.746e-17
Identity = 52/160 (32.50%), Postives = 88/160 (55.00%), Query Frame = -2
Query:    1 RVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNND-------AGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 459
            R++IALG+AR + YLH      ++H++IK +NILLD+++NP+++D G++  +      +  D          GY  PE  +S +   KSDVYS G+V LE+LTG +P    R     ++VR    +  D   +  ++D ++ G Y  + + RF ++   C
Sbjct:  729 RLRIALGSARGILYLHTEADPPIIHRDIKPSNILLDSKMNPKVADFGISKLIALDGGGVQRDHVTTIVKGTPGYVDPEYYLSHRLTEKSDVYSLGIVFLEILTGMRPISHGR-----NIVR-EVNEACDAGMMMSVIDRSM-GQYSEECVKRFMELAIRC 881          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: Y1571_ARATH (Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Arabidopsis thaliana GN=At1g35710 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 5.746e-17
Identity = 57/148 (38.51%), Postives = 79/148 (53.38%), Query Frame = -2
Query:   58 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFD-----SSRPRLEQSL-----VRWATPQLHDIDALAKMVDPAL 468
            W  R+ +  G A AL Y+H      +VH++I S NILLDN+   ++SD G A  +       +  AG+ GY APE A + +   K DVYSFGV++LEL+ G+ P D     SS P    SL      R   P+  + + L KMV+ AL
Sbjct:  952 WTKRINVVKGVAHALSYMHHDRITPIVHRDISSGNILLDNDYTAKISDFGTAKLLKTDSSNWSAVAGTYGYVAPEFAYTMKVTEKCDVYSFGVLILELIIGKHPGDLVSSLSSSPGEALSLRSISDERVLEPRGQNREKLLKMVEMAL 1099          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: SRK6_BRAOE (Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 5.746e-17
Identity = 50/140 (35.71%), Postives = 79/140 (56.43%), Query Frame = -2
Query:   58 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNN---DAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPAL 468
            WN R  I  G AR L YLH+     ++H+++K +NILLD  + P++SD G+A      +   N        GY +PE AM G ++ KSDV+SFGV++LE+++G+K         E  L+ +   +  +  AL ++VDP +
Sbjct:  624 WNERFDITNGVARGLLYLHQDSRFRIIHRDLKVSNILLDKNMIPKISDFGMARIFERDETEANTMKVVGTYGYMSPEYAMYGIFSEKSDVFSFGVIVLEIVSGKKNRGFYNLDYENDLLSYVWSRWKEGRAL-EIVDPVI 762          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 5.746e-17
Identity = 45/102 (44.12%), Postives = 62/102 (60.78%), Query Frame = -2
Query:  169 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAGS--GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTG 468
            W +R KI  G A+ L +LHE   L  VH++IK+ NILLD +L P++SD GLA         ++       GY APE A+ G    K+DVYSFGV++LE++ G
Sbjct:  778 WPTRFKICCGIAKGLAFLHEESPLKFVHRDIKATNILLDKDLTPKISDFGLARLDEEEKTHISTKVAGTIGYMAPEYALWGYLTFKADVYSFGVLVLEIVAG 879          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: BRL2_ARATH (Serine/threonine-protein kinase BRI1-like 2 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 5.746e-17
Identity = 49/122 (40.16%), Postives = 74/122 (60.66%), Query Frame = -2
Query:  112 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNND--AGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWA 468
            W  R KIA G A+ L +LH  C   ++H+++KS+N+LLD ++  ++SD G+A  +   D  L+    AG+ GY  PE   S +   K DVYS GVVMLE+L+G++P D      + +LV W+
Sbjct:  937 WEERKKIAKGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDQDMEARVSDFGMARLISALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSIGVVMLEILSGKRPTDKEEFG-DTNLVGWS 1057          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: Y1105_ARATH (Probable receptor-like protein kinase At1g11050 OS=Arabidopsis thaliana GN=At1g11050 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 7.505e-17
Identity = 47/109 (43.12%), Postives = 62/109 (56.88%), Query Frame = -2
Query:  148 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAGS--GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSS 468
            W  R  I L  A+ L YLH     ++ H++IK  NILLD ++  +++D GLA      +  L        GY APE A+ GQ   KSDVYSFGVV+LE++ GRK  D S
Sbjct:  397 WPQRKSIILDVAKGLAYLHYGVKPAIYHRDIKGTNILLDVDMRARVADFGLAKQSREGESHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLS 505          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: CRK43_ARATH (Putative cysteine-rich receptor-like protein kinase 43 OS=Arabidopsis thaliana GN=CRK43 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 7.505e-17
Identity = 51/123 (41.46%), Postives = 77/123 (62.60%), Query Frame = -2
Query:  124 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA-------SNMPNADEALNNDAGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSL 468
            W  R  I LGTA  LEYLHE C   ++H++IK++NILLD +  P++SD GLA        ++P +  + ++ AG+ GY APE    G+ + K D YSFGV++LE+ +G   F +++ R + SL
Sbjct:  427 WKKRRTIILGTAEGLEYLHETCK--IIHRDIKASNILLDLKYKPKISDFGLAKFYPEGGKDIPASSLSPSSIAGTLGYMAPEYISKGRLSNKIDAYSFGVLVLEITSG---FRNNKFRSDNSL 544          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: Y5189_ARATH (Probable LRR receptor-like protein kinase At1g51890 OS=Arabidopsis thaliana GN=At1g51890 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 9.802e-17
Identity = 54/159 (33.96%), Postives = 87/159 (54.72%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEA--LNNDAGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            W +R++IA+  A+ LEYLH  C   +VH+++K  NILL+     +L+D GL+ + P   E+  +   AG+ GY  PE   +   + KSDVYSFGVV+LE++T +   + +R R    +  W    L + D +  +VDP L   Y    + +  ++   C
Sbjct:  665 WETRMQIAVEAAQGLEYLHNGCRPPMVHRDVKPTNILLNERSQAKLADFGLSRSFPVDGESHVMTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVMNKNRER--PHINEWVMFMLTNGD-IKSIVDPKLNEDYDTNGVWKVVELALAC 820          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: WAKLG_ARATH (Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 9.802e-17
Identity = 51/140 (36.43%), Postives = 77/140 (55.00%), Query Frame = -2
Query:   55 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNN--DAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALK 468
            W  R+ IA   A AL YLH   S+ + H+++KS NILLD +   ++SD G++ ++   D  L        GY  PE   S  +  KSDVYSFGV+++ELLTG KP    R +  + L  +    + + D L +++D  +K
Sbjct:  486 WEVRLCIACEVADALSYLHSAVSIPIYHRDVKSTNILLDEKHRAKVSDFGISRSVAIDDTHLTTIVQGTIGYVDPEYLQSNHFTGKSDVYSFGVLLIELLTGEKPVSLLRRQEVRMLGAYFLEAMRN-DRLHEILDARIK 624          
The following BLAST results are available for this feature:
BLAST of CV712163 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 271
Match NameE-valueIdentityDescription
CRK12_ARATH4.400e-1740.57Putative cysteine-rich receptor-like protein kinas... [more]
Y5374_ARATH5.746e-1732.50Probable LRR receptor-like serine/threonine-protei... [more]
Y1571_ARATH5.746e-1738.51Probable leucine-rich repeat receptor-like protein... [more]
SRK6_BRAOE5.746e-1735.71Putative serine/threonine-protein kinase receptor ... [more]
RKF1_ARATH5.746e-1744.12Probable LRR receptor-like serine/threonine-protei... [more]
BRL2_ARATH5.746e-1740.16Serine/threonine-protein kinase BRI1-like 2 OS=Ara... [more]
Y1105_ARATH7.505e-1743.12Probable receptor-like protein kinase At1g11050 OS... [more]
CRK43_ARATH7.505e-1741.46Putative cysteine-rich receptor-like protein kinas... [more]
Y5189_ARATH9.802e-1733.96Probable LRR receptor-like protein kinase At1g5189... [more]
WAKLG_ARATH9.802e-1736.43Wall-associated receptor kinase-like 8 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001A05_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712163 ID=CV712163; Name=CV712163; organism=Citrus sinensis; type=EST; length=472bp
ACAAAGAGCAATGACATCTGCAAAACGGGAGAGAGATTTGACTGGGTAGA
GCCCTTTGAGTGCGGGATCAACCATTTTAGCAAGGGCATCAATGTCATGG
AGCTGAGGAGTTGCCCATCGAACCAAAGATTGCTCCAATCTTGGCCTCGA
GCTATCAAATGGTTTACGTCCAGTAAGAAGCTCCAGCATAACAACCCCAA
AACTGTAGACATCACTTTTTATATTATATTGACCAGACATGGCAACCTCA
GGTGCACCATATCCAGAACCAGCATCATTGTTCAATGCCTCATCTGCATT
TGGCATATTGCTTGCCAGGCCACAGTCAGAAAGTTGAGGATTGAGCTCGT
TGTCCAGTAATATGTTGGCCGACTTAATATTTTTGTGAACAACTGACAGT
GAGCAGACTTCATGCAGGTACTCCAGTGCTCGTGCAGTCCCCAAAGCAAT
CTTGACACGGGAGTTCCATATC
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