CV712163

Overview
NameCV712163
Unique NameCV712163
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length472
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2407 contig Csv1_Contig2407:66..537. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: Y5707_ARATH (Probable receptor-like protein kinase At5g47070 OS=Arabidopsis thaliana GN=At5g47070 PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 1.365e-26
Identity = 63/158 (39.87%), Postives = 94/158 (59.49%), Query Frame = -2
Query:   13 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAG---SGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYP---VKSLSRFADV 468
            W  R++I LG A  L YLH+   L V++++ KS+N+LLD++  P+LSD GLA   P+ D      A     GY APE   +G   +KSDVYSFGVV+ E++TGR+  + ++P  E+ L+ W      D    + +VDP L+  YP    +SL++ AD+
Sbjct:  192 WKKRLEIMLGAAEGLTYLHD---LKVIYRDFKSSNVLLDDQFCPKLSDFGLAREGPDGDNTHVTTARVGTHGYAAPEYVQTGHLRLKSDVYSFGVVLYEIITGRRTIERNKPVAERRLLDWVKEYPADSQRFSMIVDPRLRNNYPAAGARSLAKLADL 346          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: Y3545_ARATH (Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 1.365e-26
Identity = 65/159 (40.88%), Postives = 94/159 (59.12%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNND---AGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            W  R+K+AL  A+ L +LH    + V++++IK++NILLD++ N +LSD GLA + P  +++  +       GY APE   +G  N +SDVYSFGVV+LELL GR+  D +RP  EQ+LV WA P L     +  +VD  L   Y  +   R A +   C
Sbjct:  169 WILRIKVALDAAKGLAFLHSD-PVKVIYRDIKASNILLDSDFNAKLSDFGLARDGPMGEQSYVSTRVMGTFGYAAPEYVSTGHLNARSDVYSFGVVLLELLCGRQALDHNRPAKEQNLVDWARPYLTSRRKVLLIVDTRLNSQYKPEGAVRLASIAVQC 326          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 1.365e-26
Identity = 64/159 (40.25%), Postives = 97/159 (61.01%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNND---AGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            W  R+K+ALG A+ L +LH      V++++ K++NILLD+E N +LSD GLA + P  D++  +       GY APE   +G    KSDVYSFGVV+LELL+GR+  D +RP  E++LV WA P L +   + +++D  L+  Y ++   + A +   C
Sbjct:  175 WKLRLKVALGAAKGLAFLHS-SETRVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPIGDKSHVSTRVMGTHGYAAPEYLATGHLTTKSDVYSFGVVLLELLSGRRAVDKNRPSGERNLVEWAKPYLVNKRKIFRVIDNRLQDQYSMEEACKVATLSLRC 332          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.782e-26
Identity = 69/157 (43.95%), Postives = 97/157 (61.78%), Query Frame = -2
Query:    4 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAGS--GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIAL 468
            W +R+KI  GTA+AL YLHE     VVH++IK++NIL+D+E N +LSD GLA  + + +  +        GY APE A +G  N KSD+YSFGV++LE +TGR P D  RP  E +LV W    +    A  ++VDP L+   P KS  + A +++L
Sbjct:  280 WEARMKIITGTAQALAYLHEAIEPKVVHRDIKASNILIDDEFNAKLSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDPVDYGRPANEVNLVEWLKMMVGTRRA-EEVVDPRLEP-RPSKSALKRALLVSL 434          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 9.779e-25
Identity = 62/160 (38.75%), Postives = 97/160 (60.62%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADE---ALNNDAGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            W+ R+KI +G AR L +LH +    V++++ K++NILLD+  + +LSD GLA   P ADE         G+ GY APE   +G   +KSDV++FGVV+LE++TG    ++ RPR ++SLV W  P+L +   + +++D  +KG Y  K  +  A +   C
Sbjct:  190 WDLRIKIVIGAARGLAFLHSL-QREVIYRDFKASNILLDSNYDAKLSDFGLAKLGP-ADEKSHVTTRIMGTYGYAAPEYMATGHLYVKSDVFAFGVVLLEIMTGLTAHNTKRPRGQESLVDWLRPELSNKHRVKQIMDKGIKGQYTTKVATEMARITLSC 347          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 1.277e-24
Identity = 64/158 (40.51%), Postives = 93/158 (58.86%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAGS--GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            W+ R+ I LG A+ L YLHE     VVH++IKS+NILLD + N ++SD GLA  + +    +        GY APE A +G  N KSD+YSFG++++E++TGR P D SRP+ E +LV W    + +  +  ++VDP +      K+L R   V   C
Sbjct:  251 WDIRMNIILGMAKGLAYLHEGLEPKVVHRDIKSSNILLDRQWNAKVSDFGLAKLLGSESSYVTTRVMGTFGYVAPEYACTGMLNEKSDIYSFGILIMEIITGRNPVDYSRPQGETNLVDWLKSMVGNRRS-EEVVDPKIPEPPSSKALKRVLLVALRC 407          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 110.923 bits (276), Expect = 2.845e-24
Identity = 60/158 (37.97%), Postives = 89/158 (56.33%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNND--AGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            W +R++IA G A+ L YLHE C   ++H++IKS+NILLD   N  L+D GLA  M   +  ++ D     GY  PE   +     K DVYSFGVV+LELLT ++P D  +P+  + L+ W     H+  A +++ DP +      K + R  ++  LC
Sbjct:  831 WKTRLRIAQGAAKGLLYLHEGCDPHILHRDIKSSNILLDENFNSHLADFGLARLMSPYETHVSTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTDKRPVDMCKPKGCRDLISWVVKMKHESRA-SEVFDPLIYSKENDKEMFRVLEIACLC 987          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.845e-24
Identity = 64/159 (40.25%), Postives = 92/159 (57.86%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNND---AGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            W  RV +AL  A+ L +LH    + V++++IK++NILLD + N +LSD GLA + P  D +  +       GY APE   SG  N +SDVYSFGV++LE+L+G++  D +RP  E++LV WA P L     +  +VD  L   Y  +   R A V   C
Sbjct:  174 WFLRVNVALDAAKGLAFLHSD-PVKVIYRDIKASNILLDADYNAKLSDFGLARDGPMGDLSYVSTRVMGTYGYAAPEYMSSGHLNARSDVYSFGVLLLEILSGKRALDHNRPAKEENLVDWARPYLTSKRKVLLIVDNRLDTQYLPEEAVRMASVAVQC 331          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: Y2393_ARATH (Probable receptor-like protein kinase At2g39360 OS=Arabidopsis thaliana GN=At2g39360 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 8.279e-24
Identity = 62/159 (38.99%), Postives = 94/159 (59.12%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDA--GS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            W  R++I +G AR L YLH   + +++H+++KSANILLD+    +++D GL+   P+ D+   + A  GS GY  PE     Q   KSDVYSFGVVMLE++ GR   D S PR + +L+ WA  +L     L  ++DP L G   ++ + ++ +V   C
Sbjct:  583 WRQRLEICVGAARGLHYLHTGSTRAIIHRDVKSANILLDDNFMAKVADFGLSKTGPDLDQTHVSTAVKGSFGYLDPEYLTRQQLTEKSDVYSFGVVMLEVVCGRPVIDPSLPREKVNLIEWAM-KLVKKGKLEDIIDPFLVGKVKLEEVKKYCEVTEKC 740          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 3.146e-23
Identity = 61/158 (38.61%), Postives = 92/158 (58.23%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAGS--GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            W++R +I LG AR L YLHE  S+ +VH+++K++NILLD+ L PQ+SD GLA    +    ++       GY APE AM G    K+DVY+FGVV LEL++GR   D +    ++ L+ WA   LH+     +++D  L   + ++   R   +  LC
Sbjct:  789 WSTRYEICLGVARGLVYLHEEASVRIVHRDVKASNILLDSRLVPQISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVSGRPNSDENLEEEKKYLLEWAW-NLHEKSRDIELIDDKLTD-FNMEEAKRMIGIALLC 944          
The following BLAST results are available for this feature:
BLAST of CV712163 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 271
Match NameE-valueIdentityDescription
Y5707_ARATH1.365e-2639.87Probable receptor-like protein kinase At5g47070 OS... [more]
Y3545_ARATH1.365e-2640.88Probable receptor-like protein kinase At3g55450 OS... [more]
APK1A_ARATH1.365e-2640.25Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
Y2296_ARATH1.782e-2643.95Probable receptor-like protein kinase At2g42960 OS... [more]
CX32_ARATH9.779e-2538.75Probable serine/threonine-protein kinase Cx32, chl... [more]
Y1154_ARATH1.277e-2440.51Probable serine/threonine-protein kinase At1g01540... [more]
PSKR1_ARATH2.845e-2437.97Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]
BIK1_ARATH2.845e-2440.25Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]
Y2393_ARATH8.279e-2438.99Probable receptor-like protein kinase At2g39360 OS... [more]
Y1561_ARATH3.146e-2338.61Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001A05_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712163 ID=CV712163; Name=CV712163; organism=Citrus sinensis; type=EST; length=472bp
ACAAAGAGCAATGACATCTGCAAAACGGGAGAGAGATTTGACTGGGTAGA
GCCCTTTGAGTGCGGGATCAACCATTTTAGCAAGGGCATCAATGTCATGG
AGCTGAGGAGTTGCCCATCGAACCAAAGATTGCTCCAATCTTGGCCTCGA
GCTATCAAATGGTTTACGTCCAGTAAGAAGCTCCAGCATAACAACCCCAA
AACTGTAGACATCACTTTTTATATTATATTGACCAGACATGGCAACCTCA
GGTGCACCATATCCAGAACCAGCATCATTGTTCAATGCCTCATCTGCATT
TGGCATATTGCTTGCCAGGCCACAGTCAGAAAGTTGAGGATTGAGCTCGT
TGTCCAGTAATATGTTGGCCGACTTAATATTTTTGTGAACAACTGACAGT
GAGCAGACTTCATGCAGGTACTCCAGTGCTCGTGCAGTCCCCAAAGCAAT
CTTGACACGGGAGTTCCATATC
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