CV712163

Overview
NameCV712163
Unique NameCV712163
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length472
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: Y1199_DICDI (Probable serine/threonine-protein kinase DDB_G0282895 OS=Dictyostelium discoideum GN=DDB_G0282895 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 5.566e-12
Identity = 41/103 (39.81%), Postives = 61/103 (59.22%), Query Frame = -2
Query:  157 VKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAGSG---YGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPF 456
            +K AL  A+ L YLH   S+  +H++IK+ANIL+D   N ++ D GL+  +   D   N  A +G   + +PE  M   Y   SDVYS+G+++ EL TG +PF
Sbjct: 1478 IKYALSVAQGLAYLH---SVDFIHRDIKAANILVDKNNNAKVGDFGLSRVI---DNNFNMTAVAGTPKWESPECLMGEAYTSASDVYSYGMMLFELATGDEPF 1574          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: RPKL_ARATH (Receptor protein kinase-like protein At4g34220 OS=Arabidopsis thaliana GN=At4g34220 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 7.269e-12
Identity = 46/103 (44.66%), Postives = 61/103 (59.22%), Query Frame = -2
Query:  166 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNND--AGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGR 468
            + +R+KIA G AR L Y++E      VH NIK  NILL+ E  P ++D GL   M  A E+      + S Y  PE + S + N K DVYSFGV++LELLT +
Sbjct:  579 FEARLKIARGMARGLSYINEK---KQVHGNIKPNNILLNAENEPIITDLGLDRLMTPARESHTTGPTSSSPYQPPEWSTSLKPNPKWDVYSFGVILLELLTSK 678          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: Y9865_DICDI (Probable serine/threonine-protein kinase DDB_G0280461 OS=Dictyostelium discoideum GN=DDB_G0280461 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.240e-11
Identity = 40/111 (36.04%), Postives = 63/111 (56.76%), Query Frame = -2
Query:  139 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAGSG-YGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPR 468
            W+ RVKIA   A  +EYLH   S  ++H+++KS N+LL      ++ D G A  +   +       G+  + +PEV +  QY+  +D+YSFG+V+LEL+T R   D   P+
Sbjct:  113 WSLRVKIAKDIAEGMEYLH---SKQIMHRDLKSNNLLLGRNWTIKICDFGFAKEITIQNPLSMTICGTDEFMSPEVILGIQYSYSADIYSFGMVLLELIT-RSKLDERLPQ 219          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: Y9955_DICDI (Probable serine/threonine-protein kinase DDB_G0267514 OS=Dictyostelium discoideum GN=DDB_G0267514 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.619e-11
Identity = 35/99 (35.35%), Postives = 57/99 (57.58%), Query Frame = -2
Query:  157 KIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPF 453
            K+A+  A+ + YLH      V+H++IKS N+LLD  +N ++ D GL+     + E   +     + +PE+ M   Y  K DVY+FG+++ EL TG  P+
Sbjct:  763 KLAIQIAQGMNYLH---LSGVIHRDIKSLNLLLDEHMNVKICDFGLSKLKSKSTEMTKSIGSPIWMSPELLMGEDYTEKVDVYAFGIILWELGTGELPY 858          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: SHK2_SCHPO (Serine/threonine-protein kinase shk2 OS=Schizosaccharomyces pombe GN=shk2 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.619e-11
Identity = 39/145 (26.90%), Postives = 76/145 (52.41%), Query Frame = -2
Query:   25 KIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAGSGYG-APEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRP-RLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSR 453
            +I L T + +++LH   + +++H++IKS N+LLDN  N +++D G  + + N         G+ Y  APEV    +Y  K D++S G++++E++    P+    P R    + +  TP L   + ++K +   L     + ++ R
Sbjct:  413 RICLETCKGIQHLH---ARNIIHRDIKSDNVLLDNSGNIKITDFGFCARLSNRTNKRVTMVGTPYWMAPEVVKQNEYGTKVDIWSLGIMIIEMIENEPPYLREDPIRALYLIAKNGTPTLKKPNLVSKNLKSFLNSCLTIDTIFR 554          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: RCKA_DICDI (RGS domain-containing serine/threonine-protein kinase A OS=Dictyostelium discoideum GN=rckA PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.115e-11
Identity = 36/107 (33.64%), Postives = 59/107 (55.14%), Query Frame = -2
Query:  148 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSS 468
            +  R+  ALG AR + YLH   S+S++H+++KS NILL   L  ++ D G  S + N      +     + APE+  S  Y  K DVYS+ +++ E+ T +  +D +
Sbjct:  937 FGQRLHFALGIARGMRYLH---SMSIIHRDLKSMNILLTKRLKIKIVDFG-TSRVANKYNMTTHVGTQAWMAPEIFTSRTYTNKVDVYSYAIILFEIFTRKSAYDEN 1039          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: MP2K4_MOUSE (Dual specificity mitogen-activated protein kinase kinase 4 OS=Mus musculus GN=Map2k4 PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 2.115e-11
Identity = 47/125 (37.60%), Postives = 71/125 (56.80%), Query Frame = -2
Query:  100 KIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAG-SGYGAPE----VAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQ--SLVRWATPQL 453
            KI L T +AL +L E  +L ++H++IK +NILLD   N +L D G++  + ++  A   DAG   Y APE     A    Y+++SDV+S G+ + EL TGR P+       +Q   +V+   PQL
Sbjct:  205 KITLATVKALNHLKE--NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDS-IAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQL 326          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: MP2K4_HUMAN (Dual specificity mitogen-activated protein kinase kinase 4 OS=Homo sapiens GN=MAP2K4 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.115e-11
Identity = 47/125 (37.60%), Postives = 71/125 (56.80%), Query Frame = -2
Query:  100 KIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAG-SGYGAPE----VAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQ--SLVRWATPQL 453
            KI L T +AL +L E  +L ++H++IK +NILLD   N +L D G++  + ++  A   DAG   Y APE     A    Y+++SDV+S G+ + EL TGR P+       +Q   +V+   PQL
Sbjct:  207 KITLATVKALNHLKE--NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDS-IAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQL 328          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: MP2K2_XENLA (Dual specificity mitogen-activated protein kinase kinase 2 (Fragment) OS=Xenopus laevis GN=map2k2 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.115e-11
Identity = 47/125 (37.60%), Postives = 71/125 (56.80%), Query Frame = -2
Query:  100 KIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAG-SGYGAPE----VAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQ--SLVRWATPQL 453
            KI L T +AL +L E  +L ++H++IK +NILLD   N +L D G++  + ++  A   DAG   Y APE     A    Y+++SDV+S G+ + EL TGR P+       +Q   +V+   PQL
Sbjct:  254 KITLATVKALNHLKE--NLKIIHRDIKPSNILLDTNGNIKLCDFGISGQLVDS-IAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQL 375          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: Y5332_ARATH (Probable inactive receptor kinase At5g53320 OS=Arabidopsis thaliana GN=At5g53320 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 3.608e-11
Identity = 40/118 (33.90%), Postives = 63/118 (53.39%), Query Frame = -2
Query:  115 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRW 468
            W +R+ +  GTAR + ++H      +VH NIKS+NI L+ +    +S  G+A+ M +           GY APE+  + +    SDVYSFG+++ E+LTG+            +LVRW
Sbjct:  406 WETRLNMVYGTARGVAHIHSQSGGKLVHGNIKSSNIFLNGKGYGCISGTGMATLMHSLPR-----HAVGYRAPEITDTRKGTQPSDVYSFGILIFEVLTGKSEV--------ANLVRW 510          
The following BLAST results are available for this feature:
BLAST of CV712163 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 271
Match NameE-valueIdentityDescription
Y1199_DICDI5.566e-1239.81Probable serine/threonine-protein kinase DDB_G0282... [more]
RPKL_ARATH7.269e-1244.66Receptor protein kinase-like protein At4g34220 OS=... [more]
Y9865_DICDI1.240e-1136.04Probable serine/threonine-protein kinase DDB_G0280... [more]
Y9955_DICDI1.619e-1135.35Probable serine/threonine-protein kinase DDB_G0267... [more]
SHK2_SCHPO1.619e-1126.90Serine/threonine-protein kinase shk2 OS=Schizosacc... [more]
RCKA_DICDI2.115e-1133.64RGS domain-containing serine/threonine-protein kin... [more]
MP2K4_MOUSE2.115e-1137.60Dual specificity mitogen-activated protein kinase ... [more]
MP2K4_HUMAN2.115e-1137.60Dual specificity mitogen-activated protein kinase ... [more]
MP2K2_XENLA2.115e-1137.60Dual specificity mitogen-activated protein kinase ... [more]
Y5332_ARATH3.608e-1133.90Probable inactive receptor kinase At5g53320 OS=Ara... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS08_0001A05_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712163 ID=CV712163; Name=CV712163; organism=Citrus sinensis; type=EST; length=472bp
ACAAAGAGCAATGACATCTGCAAAACGGGAGAGAGATTTGACTGGGTAGA
GCCCTTTGAGTGCGGGATCAACCATTTTAGCAAGGGCATCAATGTCATGG
AGCTGAGGAGTTGCCCATCGAACCAAAGATTGCTCCAATCTTGGCCTCGA
GCTATCAAATGGTTTACGTCCAGTAAGAAGCTCCAGCATAACAACCCCAA
AACTGTAGACATCACTTTTTATATTATATTGACCAGACATGGCAACCTCA
GGTGCACCATATCCAGAACCAGCATCATTGTTCAATGCCTCATCTGCATT
TGGCATATTGCTTGCCAGGCCACAGTCAGAAAGTTGAGGATTGAGCTCGT
TGTCCAGTAATATGTTGGCCGACTTAATATTTTTGTGAACAACTGACAGT
GAGCAGACTTCATGCAGGTACTCCAGTGCTCGTGCAGTCCCCAAAGCAAT
CTTGACACGGGAGTTCCATATC
back to top