CV712163

Overview
NameCV712163
Unique NameCV712163
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length472
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2407 contig Csv1_Contig2407:66..537. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: CRK30_ARATH (Putative cysteine-rich receptor-like protein kinase 30 OS=Arabidopsis thaliana GN=CRK30 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 4.109e-23
Identity = 60/161 (37.27%), Postives = 100/161 (62.11%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPN--ADEALNNDAGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATP--QLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            W  R  I  G  R L YLH+   L+++H++IK++NILLD ++NP+++D G+A N  +   +++     G+ GY  PE    GQ++ KSDVYSFGV++LE+++GRK  +SS  +++ S+    T   +L + D+  ++VDPA+ G Y    ++R   +  LC
Sbjct:  445 WTRRYNIIGGITRGLLYLHQDSRLTIIHRDIKASNILLDADMNPKIADFGMARNFRDHQTEDSTGRVVGTFGYMPPEYVAHGQFSTKSDVYSFGVLILEIVSGRK--NSSFYQMDGSVCNLVTYVWRLWNTDSSLELVDPAISGSYEKDEVTRCIHIGLLC 603          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 7.008e-23
Identity = 58/158 (36.71%), Postives = 86/158 (54.43%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAGS--GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            WN R+ IALG AR L YLHE C+  ++H+++K+ANILLD      + D GLA  +   D  +        G+ APE   +GQ + K+DV+ FGV++LEL+TG K  D    ++ + ++      L      A+MVD  LKG +    L    ++  LC
Sbjct:  397 WNRRISIALGAARGLVYLHEQCNPKIIHRDVKAANILLDESFEAIVGDFGLAKLLDQRDSHVTTAVRGTIGHIAPEYLSTGQSSEKTDVFGFGVLILELITGHKMIDQGNGQVRKGMILSWVRTLKAEKRFAEMVDRDLKGEFDDLVLEEVVELALLC 554          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: GSO1_ARATH (LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.561e-22
Identity = 63/150 (42.00%), Postives = 89/150 (59.33%), Query Frame = -2
Query:   43 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNM-PNADEALNNDAGS------GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDI-DALAKMVDPALKGLYP 468
            W +R++IA+G A+ +EYLH  C   +VH++IKS+N+LLD+ +   L D GLA  +  N D   N D+ +      GY APE A S +   KSDVYS G+V++E++TG+ P DS     E  +VRW    L     A  K++DP LK L P
Sbjct: 1055 WEARLRIAVGLAQGVEYLHHDCVPPIVHRDIKSSNVLLDSNMEAHLGDFGLAKVLTENCD--TNTDSNTWFACSYGYIAPEYAYSLKATEKSDVYSMGIVLMEIVTGKMPTDSVF-GAEMDMVRWVETHLEVAGSARDKLIDPKLKPLLP 1201          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: CRK19_ARATH (Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana GN=CRK19 PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 1.561e-22
Identity = 58/161 (36.02%), Postives = 100/161 (62.11%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLAS--NMPNADEALNNDAGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATP--QLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            W  R KI  G AR + YLH+   L+++H+++K+ NILLD+++NP+++D G+A    M   +       G+ GY +PE AM GQ+++KSDVYSFGV++LE+++G K  +SS  ++++S+    T   +L    + +++VDP+    Y    ++R   +  LC
Sbjct:  422 WTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDDDMNPKIADFGMARIFGMDQTEAMTRRVVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGMK--NSSLYQMDESVGNLVTYTWRLWSNGSPSELVDPSFGDNYQTSEITRCIHIALLC 580          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: Y5487_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g48740 OS=Arabidopsis thaliana GN=At5g48740 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 2.039e-22
Identity = 60/159 (37.74%), Postives = 89/159 (55.97%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNN---DAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            W SR+K+A+  A+ L+YLH      ++H+++KS+NILLD ++N ++SD GL+     AD +         +GY  PE   + Q   KSDVYSFGVV+LEL+ GR+P   S      +LV WA P L       ++VD  LK  +   S+ + A +   C
Sbjct:  703 WVSRLKVAVDAAKGLDYLHNGSEPRIIHRDVKSSNILLDKDMNAKVSDFGLSKQFTKADASHITTVVKGTAGYLDPEYYSTLQLTEKSDVYSFGVVLLELICGREPLSHSGSPDSFNLVLWARPNLQ--AGAFEIVDDILKETFDPASMKKAASIAIRC 859          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: FEI1_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 2.663e-22
Identity = 59/158 (37.34%), Postives = 92/158 (58.23%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAGS--GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            W+SRV I +G A+ L YLH  CS  ++H++IKS+NILLD  L  ++SD GLA  + + +  +        GY APE   SG+   K+DVYSFGV++LE+L+G++P D+S      ++V W    + +      +VDP  +G+  ++SL     +   C
Sbjct:  400 WDSRVNIIIGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNVVGWLKFLISE-KRPRDIVDPNCEGM-QMESLDALLSIATQC 555          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 3.478e-22
Identity = 67/159 (42.14%), Postives = 93/159 (58.49%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLAS-NMPNADEALNNDAGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLE-QSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            W++R KI +G A+ L YLHE   L +VH++IK+ N+LLD  LN ++SD GLA  N           AG+ GY APE AM G    K+DVYSFGVV LE+++G K   + RP+ E   L+ WA   L +  +L ++VDP L   +  K   R  ++  LC
Sbjct:  766 WSTRNKICIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLNDDENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSG-KSNTNYRPKEEFVYLLDWAY-VLQEQGSLLELVDPDLGTSFSKKEAMRMLNIALLC 922          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: HSL2_ARATH (LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana GN=HSL2 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 3.478e-22
Identity = 68/182 (37.36%), Postives = 102/182 (56.04%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPN------ADEALNNDAGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWA--------TPQLHD----------IDALAKMVDPALK-GLYPVKSLSRFADVIALC 468
            W +R  IA+G A+ L YLH      +VH+++KS NILLD+E+ P+++D GLA  +        +D +++  AGS GY APE   + + N KSDVYSFGVV+LEL+TG++P DSS     + +V++A        +P   D             L+K+VDP +K      + + +  DV  LC
Sbjct:  788 WTTRFSIAVGAAQGLSYLHHDSVPPIVHRDVKSNNILLDHEMKPRVADFGLAKPLKREDNDGVSDVSMSCVAGSYGYIAPEYGYTSKVNEKSDVYSFGVVLLELITGKRPNDSSFGE-NKDIVKFAMEAALCYPSPSAEDGAMNQDSLGNYRDLSKLVDPKMKLSTREYEEIEKVLDVALLC 968          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: GSO2_ARATH (LRR receptor-like serine/threonine-protein kinase GSO2 OS=Arabidopsis thaliana GN=GSO2 PE=2 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 3.478e-22
Identity = 63/150 (42.00%), Postives = 88/150 (58.67%), Query Frame = -2
Query:   43 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA----SNMPNADEALNNDAGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLH---DIDALAKMVDPALKGLYP 468
            W +R+KIALG A+ +EYLH  C   +VH++IKS+N+LLD+ +   L D GLA     N     E+    AGS GY APE A S +   KSDVYS G+V++E++TG+ P ++     E  +VRW    L      +A  K++D  LK L P
Sbjct: 1050 WETRLKIALGLAQGVEYLHYDCVPPIVHRDIKSSNVLLDSNIEAHLGDFGLAKILTGNYDTNTESNTMFAGSYGYIAPEYAYSLKATEKSDVYSMGIVLMEIVTGKMPTEAMFDE-ETDMVRWVETVLDTPPGSEAREKLIDSELKSLLP 1198          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 5.933e-22
Identity = 61/158 (38.61%), Postives = 87/158 (55.06%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLAS-NMPNADEALNNDAGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            W +R KI +G AR L YLHE   L +VH++IK+ N+LLD +LNP++SD GLA  +  ++       AG+ GY APE AM G    K+DVYSFG+V LE++ GR             L+ W    L + + L ++VDP L   Y  +       +  +C
Sbjct:  721 WPTRRKICIGVARGLAYLHEESRLKIVHRDIKATNVLLDKQLNPKISDFGLAKLDEEDSTHISTRIAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVHGRSNKIERSKNNTFYLIDW-VEVLREKNNLLELVDPRLGSEYNREEAMTMIQIAIMC 877          
The following BLAST results are available for this feature:
BLAST of CV712163 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 271
Match NameE-valueIdentityDescription
CRK30_ARATH4.109e-2337.27Putative cysteine-rich receptor-like protein kinas... [more]
Y5457_ARATH7.008e-2336.71Probable LRR receptor-like serine/threonine-protei... [more]
GSO1_ARATH1.561e-2242.00LRR receptor-like serine/threonine-protein kinase ... [more]
CRK19_ARATH1.561e-2236.02Cysteine-rich receptor-like protein kinase 19 OS=A... [more]
Y5487_ARATH2.039e-2237.74Probable LRR receptor-like serine/threonine-protei... [more]
FEI1_ARATH2.663e-2237.34LRR receptor-like serine/threonine-protein kinase ... [more]
Y5343_ARATH3.478e-2242.14Probable LRR receptor-like serine/threonine-protei... [more]
HSL2_ARATH3.478e-2237.36LRR receptor-like serine/threonine-protein kinase ... [more]
GSO2_ARATH3.478e-2242.00LRR receptor-like serine/threonine-protein kinase ... [more]
Y1534_ARATH5.933e-2238.61Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001A05_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712163 ID=CV712163; Name=CV712163; organism=Citrus sinensis; type=EST; length=472bp
ACAAAGAGCAATGACATCTGCAAAACGGGAGAGAGATTTGACTGGGTAGA
GCCCTTTGAGTGCGGGATCAACCATTTTAGCAAGGGCATCAATGTCATGG
AGCTGAGGAGTTGCCCATCGAACCAAAGATTGCTCCAATCTTGGCCTCGA
GCTATCAAATGGTTTACGTCCAGTAAGAAGCTCCAGCATAACAACCCCAA
AACTGTAGACATCACTTTTTATATTATATTGACCAGACATGGCAACCTCA
GGTGCACCATATCCAGAACCAGCATCATTGTTCAATGCCTCATCTGCATT
TGGCATATTGCTTGCCAGGCCACAGTCAGAAAGTTGAGGATTGAGCTCGT
TGTCCAGTAATATGTTGGCCGACTTAATATTTTTGTGAACAACTGACAGT
GAGCAGACTTCATGCAGGTACTCCAGTGCTCGTGCAGTCCCCAAAGCAAT
CTTGACACGGGAGTTCCATATC
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