CV712163

Overview
NameCV712163
Unique NameCV712163
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length472
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 7.749e-22
Identity = 60/158 (37.97%), Postives = 92/158 (58.23%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAGS--GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            W++R +I LG AR L YLHE   L +VH+++K++NILLD++L P++SD GLA    +    ++       GY APE AM G    K+DVY+FGVV LEL++GR   D +    ++ L+ WA   LH+     +++D  L   + ++   R   +  LC
Sbjct:  788 WSTRYEICLGVARGLVYLHEEARLRIVHRDVKASNILLDSKLVPKVSDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVSGRPNSDENLEDEKRYLLEWAW-NLHEKGREVELIDHQLTE-FNMEEGKRMIGIALLC 943          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 7.749e-22
Identity = 66/163 (40.49%), Postives = 93/163 (57.06%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAGS------GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLE-QSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            W++R K+ +G A+ L YLHE   L +VH++IK+ N+LLD  LN ++SD GLA      DE  N    +      GY APE AM G    K+DVYSFGVV LE+++G K   + RP+ E   L+ WA   L +  +L ++VDP L   +  K   R  ++  LC
Sbjct:  764 WSTRNKVCIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLA----KLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSG-KSNTNYRPKEEFIYLLDWAY-VLQEQGSLLELVDPDLGTSFSKKEAMRMLNIALLC 920          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 7.749e-22
Identity = 58/160 (36.25%), Postives = 91/160 (56.88%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAGS--GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQS--LVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            W +R +IALG+AR L YLH+ C   ++H+++K+ANILLD E    + D GLA  M   D  +        G+ APE   +G+ + K+DV+ +G+++LEL+TG++ FD +R   +    L+ W    L +   L  +VDP L+  Y  + L +   V  LC
Sbjct:  400 WPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE-KKLEMLVDPDLQTNYEERELEQVIQVALLC 558          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: CRK20_ARATH (Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana GN=CRK20 PE=2 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 7.749e-22
Identity = 58/161 (36.02%), Postives = 99/161 (61.49%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLAS--NMPNADEALNNDAGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATP--QLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            W+ R KI  G AR + YLH+   L+++H+++K+ NILLD ++NP+++D G+A    M   +       G+ GY APE AM G++++KSDVYSFGV++LE+++G K  +SS  +++ S+    T   +L    + +++VDP+    Y    ++R   +  LC
Sbjct:  440 WSRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMARIFGMDQTEANTRRVVGTYGYMAPEYAMYGKFSMKSDVYSFGVLVLEIVSGMK--NSSLDQMDGSISNLVTYTWRLWSNGSPSELVDPSFGDNYQTSEITRCIHIALLC 598          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: CLV1_ARATH (Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana GN=CLV1 PE=1 SV=3)

HSP 1 Score: 102.834 bits (255), Expect = 7.749e-22
Identity = 63/165 (38.18%), Postives = 97/165 (58.79%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPN--ADEALNNDAGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWA------TPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            W +R ++A+  A+ L YLH  CS  ++H+++KS NILLD++    ++D GLA  + +  A E +++ AGS GY APE A + + + KSDVYSFGVV+LEL+ G+KP       ++  +VRW         Q  D   +  +VDP L G YP+ S+     +  +C
Sbjct:  788 WETRHRVAVEAAKGLCYLHHDCSPLILHRDVKSNNILLDSDFEAHVADFGLAKFLVDGAASECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGEGVD--IVRWVRNTEEEITQPSDAAIVVAIVDPRLTG-YPLTSVIHVFKIAMMC 949          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.322e-21
Identity = 59/158 (37.34%), Postives = 92/158 (58.23%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAGS--GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            W +R++IA   A+ LEYLH  C+ S++H+++KS+NILLD  +  ++SD GL+         +++ A    GY  PE   S Q   KSDVYSFGVV+ ELL+G+KP  +     E ++V WA   +   D +  ++DP +     ++S+ R A+V   C
Sbjct:  702 WLTRLQIAQDAAKGLEYLHTGCNPSIIHRDVKSSNILLDINMRAKVSDFGLSRQTEEDLTHVSSVAKGTVGYLDPEYYASQQLTEKSDVYSFGVVLFELLSGKKPVSAEDFGPELNIVHWARSLIRKGD-VCGIIDPCIASNVKIESVWRVAEVANQC 858          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: PAM74_ARATH (Probable LRR receptor-like serine/threonine-protein kinase PAM74 OS=Arabidopsis thaliana GN=PAM74 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.322e-21
Identity = 61/159 (38.36%), Postives = 94/159 (59.12%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNND--AGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            W +R++IAL  A  LEYLH  C+  +VH++IK+ NILLD +L  +L+D GL+ + P   E   +   AG+ GY  PE   + +   KSDVYSFG+V+LE++T +   D SR +    + +W   +L   D + K++DP L G Y  +S+ R  ++   C
Sbjct:  675 WGNRLRIALEAALGLEYLHSGCTPPIVHRDIKTTNILLDEQLKAKLADFGLSRSFPIGGETHISTVVAGTPGYLDPEYYQTTRLGEKSDVYSFGIVLLEIITNQPVIDQSRSK--SHISQWVGFELTRGD-ITKIMDPNLNGDYESRSVWRVLELAMSC 830          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: CRK11_ARATH (Cysteine-rich receptor-like protein kinase 11 OS=Arabidopsis thaliana GN=CRK11 PE=2 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 1.322e-21
Identity = 58/162 (35.80%), Postives = 95/162 (58.64%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLAS--NMPNADEALNNDAGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRK---PFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            W  R KI  G AR + YLH+   L ++H+++K++NILLD ++NP+++D GLA+   +       N  AG+  Y +PE AM GQY++KSD+YSFGV++LE+++G+K    +         +LV +A+    +   L ++VDP     Y    ++R   +  LC
Sbjct:  446 WTRRYKIIGGIARGILYLHQDSRLKIIHRDLKASNILLDADMNPKIADFGLATIFGVEQTQGNTNRIAGTYAYMSPEYAMHGQYSMKSDIYSFGVLVLEIISGKKNSGVYQMDETSTAGNLVTYASRLWRNKSPL-ELVDPTFGRNYQSNEVTRCIHIALLC 606          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: RLK5_ARATH (Receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=RLK5 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 2.254e-21
Identity = 58/142 (40.85%), Postives = 87/142 (61.27%), Query Frame = -2
Query:   58 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLAS----NMPNADEALNNDAGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPAL 468
            W  R++IAL  A  L YLH  C   +VH+++KS+NILLD++   +++D G+A     +     EA++  AGS GY APE   + + N KSD+YSFGVV+LEL+TG++P DS     ++ + +W    L D   L  ++DP L
Sbjct:  790 WPERLRIALDAAEGLSYLHHDCVPPIVHRDVKSSNILLDSDYGAKVADFGIAKVGQMSGSKTPEAMSGIAGSCGYIAPEYVYTLRVNEKSDIYSFGVVLLELVTGKQPTDSELG--DKDMAKWVCTAL-DKCGLEPVIDPKL 928          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: Y4291_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g29180 OS=Arabidopsis thaliana GN=At4g29180 PE=2 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 2.944e-21
Identity = 59/161 (36.65%), Postives = 94/161 (58.39%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNAD--EALNNDAGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATP--QLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            W  R+ IA+ +A+ LEYLH  C   +VH+++K+ANILL++ L  +++D GL+   P  D    +    G+ GY  PE   + + N KSDVYSFG+V+LEL+TG++    +    + ++V +  P  ++ DID    +VDP L G +   S  +F +V   C
Sbjct:  675 WEKRLHIAIDSAQGLEYLHHGCRPPIVHRDVKTANILLNDNLEAKIADFGLSKVFPEDDLSHVVTAVMGTPGYVDPEYYNTFKLNEKSDVYSFGIVLLELITGKRSIMKTDDGEKMNVVHYVEPFLKMGDIDG---VVDPRLHGDFSSNSAWKFVEVAMSC 832          
The following BLAST results are available for this feature:
BLAST of CV712163 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 271
Match NameE-valueIdentityDescription
Y5614_ARATH7.749e-2237.97Probable LRR receptor-like serine/threonine-protei... [more]
Y5344_ARATH7.749e-2240.49Probable LRR receptor-like serine/threonine-protei... [more]
SERK1_ARATH7.749e-2236.25Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
CRK20_ARATH7.749e-2236.02Putative cysteine-rich receptor-like protein kinas... [more]
CLV1_ARATH7.749e-2238.18Receptor protein kinase CLAVATA1 OS=Arabidopsis th... [more]
Y1677_ARATH1.322e-2137.34Probable LRR receptor-like serine/threonine-protei... [more]
PAM74_ARATH1.322e-2138.36Probable LRR receptor-like serine/threonine-protei... [more]
CRK11_ARATH1.322e-2135.80Cysteine-rich receptor-like protein kinase 11 OS=A... [more]
RLK5_ARATH2.254e-2140.85Receptor-like protein kinase 5 OS=Arabidopsis thal... [more]
Y4291_ARATH2.944e-2136.65Probable LRR receptor-like serine/threonine-protei... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS08_0001A05_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712163 ID=CV712163; Name=CV712163; organism=Citrus sinensis; type=EST; length=472bp
ACAAAGAGCAATGACATCTGCAAAACGGGAGAGAGATTTGACTGGGTAGA
GCCCTTTGAGTGCGGGATCAACCATTTTAGCAAGGGCATCAATGTCATGG
AGCTGAGGAGTTGCCCATCGAACCAAAGATTGCTCCAATCTTGGCCTCGA
GCTATCAAATGGTTTACGTCCAGTAAGAAGCTCCAGCATAACAACCCCAA
AACTGTAGACATCACTTTTTATATTATATTGACCAGACATGGCAACCTCA
GGTGCACCATATCCAGAACCAGCATCATTGTTCAATGCCTCATCTGCATT
TGGCATATTGCTTGCCAGGCCACAGTCAGAAAGTTGAGGATTGAGCTCGT
TGTCCAGTAATATGTTGGCCGACTTAATATTTTTGTGAACAACTGACAGT
GAGCAGACTTCATGCAGGTACTCCAGTGCTCGTGCAGTCCCCAAAGCAAT
CTTGACACGGGAGTTCCATATC
back to top