CV712162
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712162 vs. ExPASy Swiss-Prot
Match: IF4A_ASHGO (ATP-dependent RNA helicase eIF4A OS=Ashbya gossypii GN=TIF1 PE=3 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 1.163e-64 Identity = 120/185 (64.86%), Postives = 152/185 (82.16%), Query Frame = -2 Query: 199 LEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADL 753 L++T KFMNKPVRILVK+D LTLEGI+Q+Y+NVE EE+K + L DLY+++++TQ+VIF NTRRKV+ LT ++ TVSA + D+ Q RD IM+EFR+GSSR+LI+TDLLARGIDVQQVSLVINYDLP ENY+HRIGR GRFGRKGVAIN VT D + ++++FY+ IEELP+N+ADL Sbjct: 210 LDVTDKFMNKPVRILVKKDALTLEGIQQYYINVESEEYKYDCLSDLYDSISVTQAVIFCNTRRKVEELTKRLTDDSFTVSAIYSDLPQAQRDTIMKEFRTGSSRILISTDLLARGIDVQQVSLVINYDLPNNKENYIHRIGRGGRFGRKGVAINLVTDRDVGDMRELERFYSTQIEELPANIADL 394
BLAST of CV712162 vs. ExPASy Swiss-Prot
Match: FAL1_VANPO (ATP-dependent RNA helicase FAL1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=FAL1 PE=3 SV=1) HSP 1 Score: 245.743 bits (626), Expect = 1.984e-64 Identity = 115/185 (62.16%), Postives = 151/185 (81.62%), Query Frame = -2 Query: 199 LEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADL 753 LE+T+KFM+ PV+ILVKRDE++LEGIKQ+YVNVEKE+WK +TLCDLY++L ITQ VIF NT++KVDWL+ K+ + V + HGDM Q R+ +M +FRSG SRVLI+TD+ ARGIDVQQVSLVINYD+P ENY+HRIGRSGRFGRKGVAINF+T D + +I+K+Y + I +P++++ + Sbjct: 214 LEVTKKFMSDPVKILVKRDEISLEGIKQYYVNVEKEDWKFDTLCDLYDSLTITQCVIFCNTKKKVDWLSAKLTQSNFAVVSMHGDMKQEDRNKVMSDFRSGHSRVLISTDVWARGIDVQQVSLVINYDIPEIMENYIHRIGRSGRFGRKGVAINFITSSDLSKMKEIEKYYRIKISPVPADLSTI 398
BLAST of CV712162 vs. ExPASy Swiss-Prot
Match: FAL1_PICGU (ATP-dependent RNA helicase FAL1 OS=Pichia guilliermondii GN=FAL1 PE=3 SV=2) HSP 1 Score: 243.432 bits (620), Expect = 9.848e-64 Identity = 115/186 (61.83%), Postives = 149/186 (80.11%), Query Frame = -2 Query: 196 LEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 753 LE+T KF + PV+ILVKRD++TL+GIKQ+Y+ EKE+WK +TLCDLY+ L ITQ+VIF NT+ KV+WL +MR + TV+A HGDM Q RD IM+EFRSGS+RVLI+TD+ ARGIDVQQVSLVINYDLP ENY+HRIGRSGRFGRKG AIN +T D+ L +Q +Y+ I E+P++++ ++ Sbjct: 212 LEMTNKFTSDPVKILVKRDDVTLKGIKQYYIQCEKEDWKFDTLCDLYDNLTITQAVIFCNTKAKVNWLAGQMRKSNFTVAAMHGDMKQEDRDSIMKEFRSGSTRVLISTDVWARGIDVQQVSLVINYDLPLDKENYVHRIGRSGRFGRKGTAINLLTSQDKDELKSLQHYYSTKIREVPADLSKIM 397
BLAST of CV712162 vs. ExPASy Swiss-Prot
Match: IF4A_LEIMA (Probable eukaryotic initiation factor 4A OS=Leishmania major GN=LMJ_0078 PE=3 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 1.422e-62 Identity = 118/186 (63.44%), Postives = 148/186 (79.57%), Query Frame = -2 Query: 196 LEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 753 LE+T+KFM PVRILVKR+ LTLEGIKQF++ VE EE KL+TL DLYET++I QSVIF NTRRKVDW+ +K+ +HTVS+ H +M ++ R+ +M FRSGSSRVL+TTDL+ARGIDV V++VIN+DLPT ENYLHRIGR GR+GRKGVAINFVT D +L +I+ Y+ I+ELP + A L Sbjct: 217 LELTKKFMRDPVRILVKRESLTLEGIKQFFIAVE-EEHKLDTLMDLYETVSIAQSVIFANTRRKVDWIAEKLNQSNHTVSSMHAEMPKSDRERVMNTFRSGSSRVLVTTDLVARGIDVHHVNIVINFDLPTNKENYLHRIGRGGRYGRKGVAINFVTEKDVELLHEIEAHYHTQIDELPVDFAAYL 401
BLAST of CV712162 vs. ExPASy Swiss-Prot
Match: IF4A_LEIIN (Probable eukaryotic initiation factor 4A OS=Leishmania infantum GN=LinJ01.0780 PE=3 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 1.422e-62 Identity = 118/186 (63.44%), Postives = 148/186 (79.57%), Query Frame = -2 Query: 196 LEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 753 LE+T+KFM PVRILVKR+ LTLEGIKQF++ VE EE KL+TL DLYET++I QSVIF NTRRKVDW+ +K+ +HTVS+ H +M ++ R+ +M FRSGSSRVL+TTDL+ARGIDV V++VIN+DLPT ENYLHRIGR GR+GRKGVAINFVT D +L +I+ Y+ I+ELP + A L Sbjct: 217 LELTKKFMRDPVRILVKRESLTLEGIKQFFIAVE-EEHKLDTLMDLYETVSIAQSVIFANTRRKVDWIAEKLNQSNHTVSSMHAEMPKSDRERVMNTFRSGSSRVLVTTDLVARGIDVHHVNIVINFDLPTNKENYLHRIGRGGRYGRKGVAINFVTEKDVELLHEIEAHYHTQIDELPVDFAAYL 401
BLAST of CV712162 vs. ExPASy Swiss-Prot
Match: IF4A_LEIBR (Probable eukaryotic initiation factor 4A OS=Leishmania braziliensis GN=LbrM01_V2.0740 PE=3 SV=2) HSP 1 Score: 239.195 bits (609), Expect = 1.857e-62 Identity = 118/186 (63.44%), Postives = 148/186 (79.57%), Query Frame = -2 Query: 196 LEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 753 LE+T+KFM PVRILVKR+ LTLEGIKQF++ VE EE KL+TL DLYET++I QSVIF NTRRKVDW+ +K+ +HTVS+ H +M ++ R+ +M FRSGSSRVL+TTDL+ARGIDV V++VIN+DLPT ENYLHRIGR GR+GRKGVAINFVT D +L +I+ Y+ I+ELP + A L Sbjct: 217 LELTKKFMRDPVRILVKRESLTLEGIKQFFIAVE-EEHKLDTLMDLYETVSIAQSVIFANTRRKVDWIAEKLNQSNHTVSSMHAEMPKSDRERVMNTFRSGSSRVLVTTDLVARGIDVHHVNIVINFDLPTNKENYLHRIGRGGRYGRKGVAINFVTEKDVELLHEIEGHYHTQIDELPVDFAAYL 401
BLAST of CV712162 vs. ExPASy Swiss-Prot
Match: RH34_ARATH (DEAD-box ATP-dependent RNA helicase 34 OS=Arabidopsis thaliana GN=RH34 PE=2 SV=2) HSP 1 Score: 237.654 bits (605), Expect = 5.404e-62 Identity = 117/182 (64.29%), Postives = 142/182 (78.02%), Query Frame = -2 Query: 208 LEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNV 753 LE+T KFM PVRILVK DELTLEGIKQ+YV+V+KEEWK +TLCDLY L I Q++IF NTR+KVDWLT+KMRS + VS+ HGD Q RD IM +FRS SRVLI +D+ ARGIDVQ VS VINYD+P PE Y+HRIGR+GRFGR+GVAINFV D + L DI++ Y I E+P+++ Sbjct: 210 LEMTEKFMTDPVRILVKPDELTLEGIKQYYVDVDKEEWKFDTLCDLYGRLTINQAIIFCNTRQKVDWLTEKMRSSNFIVSSMHGDKRQKERDDIMNQFRSFKSRVLIASDVWARGIDVQTVSHVINYDIPNNPELYIHRIGRAGRFGREGVAINFVKSSDMKDLKDIERHYGTKIREMPADL 391
BLAST of CV712162 vs. ExPASy Swiss-Prot
Match: IF4A_TRYBB (Probable eukaryotic initiation factor 4A OS=Trypanosoma brucei brucei GN=Tb09.160.3270 PE=3 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 1.204e-61 Identity = 118/186 (63.44%), Postives = 146/186 (78.49%), Query Frame = -2 Query: 196 LEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 753 LE+T+KFM P RILVKR+ LTLEGIKQF++ VE EE KL+TL DLYET++I QSVIF NTRRKVDWL ++ S +HTVS H +M + R+ +M FR+GSSRVL+TTDL+ARGIDV V++VIN+DLPT ENYLHRIGR GR+GRKGVAINFVT+ D +L +I+ Y+ IEELP + A L Sbjct: 218 LELTKKFMRDPTRILVKRESLTLEGIKQFFIAVE-EEHKLDTLMDLYETVSIAQSVIFANTRRKVDWLASQLNSSNHTVSCMHSEMSKQEREKVMGTFRNGSSRVLVTTDLVARGIDVHHVNIVINFDLPTNKENYLHRIGRGGRYGRKGVAINFVTQKDVEVLREIESHYHTQIEELPVDFAAYL 402
BLAST of CV712162 vs. ExPASy Swiss-Prot
Match: IF4A_TRYCR (Probable eukaryotic initiation factor 4A OS=Trypanosoma cruzi GN=Tc00.1047053511585.190 PE=3 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 6.606e-60 Identity = 114/186 (61.29%), Postives = 145/186 (77.96%), Query Frame = -2 Query: 196 LEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 753 LE+T+KFM P RILVKR+ LTLEGIKQ+++ VE EE KL+TL DLYET++I QSVIF NTRRKVDWL ++ +HTVS H +M + R+ +M FR+GSSRVL+TTDL+ARGIDV V++VIN+DLPT E+YLHRIGR GR+GRKGVAINFVT+ D +L +I+ Y+ I+ELP + A L Sbjct: 218 LELTKKFMRDPTRILVKRESLTLEGIKQYFIAVE-EEHKLDTLMDLYETVSIAQSVIFANTRRKVDWLAQQLNQSNHTVSCMHSEMPKQDREKVMSTFRNGSSRVLVTTDLVARGIDVHHVNIVINFDLPTNKESYLHRIGRGGRYGRKGVAINFVTQKDVEVLREIESHYHTQIDELPVDFAAYL 402
BLAST of CV712162 vs. ExPASy Swiss-Prot
Match: IF4A2_ORYSJ (Putative eukaryotic initiation factor 4A-2 OS=Oryza sativa subsp. japonica GN=Os02g0221300 PE=3 SV=2) HSP 1 Score: 210.69 bits (535), Expect = 7.074e-54 Identity = 116/189 (61.38%), Postives = 142/189 (75.13%), Query Frame = -2 Query: 196 ALEITRKFMNKPVRILVKRDELTLEGI--KQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 756 ALE+ RK+MNKPV I+V RDE LEGI KQFYVNVEKE+ KL+ LC L++T+ IT+S+IFVNTR LT+K+R + +TVSA HG + Q RD ++EF+SGSSR+LITTDL RGIDV + I YDLPTQP YL + +SG+ GRKGVAI+F+T DER+ IQKF N IEELPSNVADLL Sbjct: 232 ALEMCRKYMNKPVEIIVPRDE-ELEGINVKQFYVNVEKEDCKLDKLCGLFDTMEITRSIIFVNTRHHAKSLTEKIRGKGYTVSAIHGGIHQRARDKAVQEFQSGSSRILITTDL--RGIDVLRAPAAIFYDLPTQPVCYLRHV-QSGQHGRKGVAISFITSTDERVFSTIQKFCNTQIEELPSNVADLL 416 The following BLAST results are available for this feature:
BLAST of CV712162 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712162 ID=CV712162; Name=CV712162; organism=Citrus sinensis; type=EST; length=757bpback to top |