CV712162
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712162 vs. ExPASy Swiss-Prot
Match: DDX25_BOVIN (ATP-dependent RNA helicase DDX25 OS=Bos taurus GN=DDX25 PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 9.606e-35 Identity = 75/183 (40.98%), Postives = 113/183 (61.75%), Query Frame = -2 Query: 220 EITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP------ENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEEL 750 + + + P I ++++ELTL I+Q+YV + K + LC++Y + I Q++IF TRR WLT +M H VS G++ + R I++ FR G +VLITT++ ARGIDV+QV++V+N+DLP E YLHRIGR+GRFG+KG+A N + D +L IQ +N I++L Sbjct: 288 QFAERIIPDPNVIKLRKEELTLNNIRQYYVLCGNRKDKYQALCNIYGGITIGQAIIFCQTRRNAKWLTVEMMQDGHQVSLLSGELTVDQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVNFDLPVNQAEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDKLPLLMKIQDHFNSSIKQL 470
BLAST of CV712162 vs. ExPASy Swiss-Prot
Match: DD19B_HUMAN (ATP-dependent RNA helicase DDX19B OS=Homo sapiens GN=DDX19B PE=1 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 9.606e-35 Identity = 77/190 (40.53%), Postives = 117/190 (61.58%), Query Frame = -2 Query: 202 EITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP------ENYLHRIGRSGRFGRKGVAINFV-TRDDERMLFDIQKFYNVVIEELPSNVAD 750 + +K + P I +KR+E TL+ IKQ+YV + K + LC+LY + I Q++IF +TR+ WL ++ H V+ G+M R ++ FR G +VL+TT++ ARGIDV+QVS+VIN+DLP E YLHRIGR+GRFG++G+A+N V ++ +L IQ+ +N IE L ++ D Sbjct: 283 KFAQKVVPDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLD 472
BLAST of CV712162 vs. ExPASy Swiss-Prot
Match: DD19A_HUMAN (ATP-dependent RNA helicase DDX19A OS=Homo sapiens GN=DDX19A PE=1 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 9.606e-35 Identity = 77/190 (40.53%), Postives = 117/190 (61.58%), Query Frame = -2 Query: 202 EITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP------ENYLHRIGRSGRFGRKGVAINFV-TRDDERMLFDIQKFYNVVIEELPSNVAD 750 + +K + P I +KR+E TL+ IKQ+YV + K + LC+LY + I Q++IF +TR+ WL ++ H V+ G+M R ++ FR G +VL+TT++ ARGIDV+QVS+VIN+DLP E YLHRIGR+GRFG++G+A+N V ++ +L IQ+ +N IE L ++ D Sbjct: 282 KFAQKVVPDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLD 471
BLAST of CV712162 vs. ExPASy Swiss-Prot
Match: DD19A_BOVIN (ATP-dependent RNA helicase DDX19A OS=Bos taurus GN=DDX19A PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.638e-34 Identity = 76/190 (40.00%), Postives = 117/190 (61.58%), Query Frame = -2 Query: 202 EITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP------ENYLHRIGRSGRFGRKGVAINFV-TRDDERMLFDIQKFYNVVIEELPSNVAD 750 + +K + P I +KR+E TL+ IKQ+YV + K + LC++Y + I Q++IF +TR+ WL ++ H V+ G+M R ++ FR G +VL+TT++ ARGIDV+QVS+VIN+DLP E YLHRIGR+GRFG++G+A+N V ++ +L IQ+ +N IE L ++ D Sbjct: 282 KFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNSRDEKFQALCNIYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMVVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLD 471
BLAST of CV712162 vs. ExPASy Swiss-Prot
Match: DBP5_SCLS1 (ATP-dependent RNA helicase dbp5 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=dbp5 PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.638e-34 Identity = 80/183 (43.72%), Postives = 113/183 (61.75%), Query Frame = -2 Query: 220 RKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQ--------PENYLHRIGRSGRFGRKGVAINFV-TRDDERMLFDIQKFYNVVIEEL 741 ++F + I +KRDELT+ GIKQ +++ E K E L LY + I S+IFV R + +++ + H V+A HG + RD ++ +FR G ++VLITT++LARGIDVQ VS+VINYD+P + PE YLHRIGR+GRFGR GV+I+FV R L I YN+ + +L Sbjct: 261 QQFSPRANEIKLKRDELTVSGIKQMFMDCPNEVGKYEILVKLYGLMTIGSSIIFVKRRDTASHIAERLTAEGHKVAAIHGAFEGAERDTVLEDFRQGKAKVLITTNVLARGIDVQSVSMVINYDIPMKGRSDFEPDPETYLHRIGRTGRFGRVGVSISFVFDRKSYDALNKIAHHYNIDLIKL 443
BLAST of CV712162 vs. ExPASy Swiss-Prot
Match: DBP5_NEOFI (ATP-dependent RNA helicase dbp5 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=dbp5 PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.638e-34 Identity = 82/185 (44.32%), Postives = 116/185 (62.70%), Query Frame = -2 Query: 220 KFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT--QP---------ENYLHRIGRSGRFGRKGVAINFVT-RDDERMLFDIQKFYNVVIEEL 738 KF I ++ +ELT+EGIKQ Y++ E K +TL LY L + S+IFV TR + +M + HTV + G+ D + RD I+ +FR G ++VLI T++LARGIDV VS+VINYD+P QP + YLHRIGR+GRFGR GV+I+FV+ R++ ML IQ ++N I+ + Sbjct: 275 KFAPNANEITLQHEELTVEGIKQLYLDCADGEDKYKTLVQLYGLLTVGSSIIFVQTRAAAQEIEKRMTAEGHTVVSLTGERDPSVRDAIIDQFRRGEAKVLIATNVLARGIDVSTVSMVINYDIPELHQPSVPGRQADFQTYLHRIGRTGRFGRVGVSISFVSNREEWEMLNQIQTYFNCEIQRV 459
BLAST of CV712162 vs. ExPASy Swiss-Prot
Match: DDX25_XENLA (ATP-dependent RNA helicase DDX25 OS=Xenopus laevis GN=deadsouth PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.140e-34 Identity = 73/176 (41.48%), Postives = 111/176 (63.07%), Query Frame = -2 Query: 214 PVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP------ENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPS 723 P I +K++ELTL+ I+QFY E +E K LC+LY + I Q+++F TR+ WL+ K+ H V+ G++ R +++ FR G +VL+TT++ ARGIDV+QVS+V+N+DLP E YLHRIGR+GRFG+KG+A++ + ML +I+ +N I +L S Sbjct: 297 PNIIKLKKEELTLKNIQQFYDQCENKEQKYSALCNLYGVITIAQAIVFCQTRKIASWLSQKLSDDGHQVALLSGELPVYDRADMIQRFREGREKVLVTTNVCARGIDVEQVSIVVNFDLPVNVDGSVDFETYLHRIGRTGRFGKKGIAVSLIENFFVYMLKEIEDHFNTKITKLNS 472
BLAST of CV712162 vs. ExPASy Swiss-Prot
Match: DBP5_YEAST (ATP-dependent RNA helicase DBP5 OS=Saccharomyces cerevisiae GN=DBP5 PE=1 SV=2) HSP 1 Score: 145.591 bits (366), Expect = 2.795e-34 Identity = 75/177 (42.37%), Postives = 115/177 (64.97%), Query Frame = -2 Query: 241 EITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT------QPENYLHRIGRSGRFGRKGVAINFV-TRDDERMLFDIQKFY 750 + +K + + ++ +E+ ++ IKQ Y++ + E K + L +LY + I S+IFV T++ + L K++S H VS HGD+ RD ++ +FR G S+VLITT++LARGID+ VS+V+NYDLPT P Y+HRIGR+GRFGRKGVAI+FV ++ +L IQK++ Sbjct: 280 QYAKKIVPNANTLELQTNEVNVDAIKQLYMDCKNEADKFDVLTELYGLMTIGSSIIFVATKKTANVLYGKLKSEGHEVSILHGDLQTQERDRLIDDFREGRSKVLITTNVLARGIDIPTVSMVVNYDLPTLANGQADPATYIHRIGRTGRFGRKGVAISFVHDKNSFNILSAIQKYF 456
BLAST of CV712162 vs. ExPASy Swiss-Prot
Match: DBP5_YEAS7 (ATP-dependent RNA helicase DBP5 OS=Saccharomyces cerevisiae (strain YJM789) GN=DBP5 PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.795e-34 Identity = 75/177 (42.37%), Postives = 115/177 (64.97%), Query Frame = -2 Query: 241 EITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT------QPENYLHRIGRSGRFGRKGVAINFV-TRDDERMLFDIQKFY 750 + +K + + ++ +E+ ++ IKQ Y++ + E K + L +LY + I S+IFV T++ + L K++S H VS HGD+ RD ++ +FR G S+VLITT++LARGID+ VS+V+NYDLPT P Y+HRIGR+GRFGRKGVAI+FV ++ +L IQK++ Sbjct: 280 QYAKKIVPNANTLELQTNEVNVDAIKQLYMDCKNEADKFDVLTELYGLMTIGSSIIFVATKKTANVLYGKLKSEGHEVSILHGDLQTQERDRLIDDFREGRSKVLITTNVLARGIDIPTVSMVVNYDLPTLANGQADPATYIHRIGRTGRFGRKGVAISFVHDKNSFNILSAIQKYF 456
BLAST of CV712162 vs. ExPASy Swiss-Prot
Match: DBP5_PHANO (ATP-dependent RNA helicase DBP5 OS=Phaeosphaeria nodorum GN=DBP5 PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.795e-34 Identity = 76/189 (40.21%), Postives = 116/189 (61.38%), Query Frame = -2 Query: 211 LEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT-------QPENYLHRIGRSGRFGRKGVAINFV-TRDDERMLFDIQKFYNVVIEELPSN 753 + KF + + +ELT+EGIKQ Y++++K++ K TL Y + S+IFV TRR + L +M + H V+ G ++ RD ++ +FRSG ++VLITT++LARGIDV+ V++VINYD+PT PE YLHRIGR+GRFGR GVA+ FV + + L DI ++ + + ++ Sbjct: 252 INYANKFAPNSNVLTLAHEELTIEGIKQLYIDIDKDQDKYSTLLKFYGLMTQASSIIFVRTRRTAEELERRMVAEGHKVAQLSGALEGQDRDRVIDQFRSGEAKVLITTNVLARGIDVESVTMVINYDVPTMADGREADPETYLHRIGRTGRFGRVGVALTFVHDKASWQQLHDIASYFKTDLHPIDTS 440 The following BLAST results are available for this feature:
BLAST of CV712162 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712162 ID=CV712162; Name=CV712162; organism=Citrus sinensis; type=EST; length=757bpback to top |