CV712161
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV712161 vs. ExPASy Swiss-Prot
Match: IF4A_NEOFI (ATP-dependent RNA helicase eIF4A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=tif1 PE=3 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 1.069e-68 Identity = 125/184 (67.93%), Postives = 151/184 (82.07%), Query Frame = 1 Query: 214 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQV 765 ++YDE+ DSFD+M L+ LLRGIYAYGFE+PSAIQQR I+P KG DVI QAQSGTGKTATF LQ+LD + CQAL+LAPTRELAQQI+KV+ A+GD++ ++ HAC+GGT+VRED + LQ G VVVGTPGRV DM++R+ LR D +KMF+LDEADEMLSRGF +QIYDIFQLLP QV Sbjct: 18 SNYDEITDSFDSMELKPELLRGIYAYGFERPSAIQQRAILPIIKGNDVIAQAQSGTGKTATFSISALQKLDPNVKGCQALILAPTRELAQQIQKVVVAIGDFMNIECHACIGGTNVREDMKALQEGPQVVVGTPGRVQDMIQRRVLRTDNLKMFILDEADEMLSRGFTEQIYDIFQLLPQSTQV 201 HSP 2 Score: 27.335 bits (59), Expect = 1.069e-68 Identity = 11/18 (61.11%), Postives = 14/18 (77.78%), Query Frame = 2 Query: 770 VFSATMPPEALEITRKFM 823 + SATMP + LE+T KFM Sbjct: 203 LLSATMPQDVLEVTTKFM 220
BLAST of CV712161 vs. ExPASy Swiss-Prot
Match: IF4A_PHANO (ATP-dependent RNA helicase eIF4A OS=Phaeosphaeria nodorum GN=TIF1 PE=3 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 1.069e-68 Identity = 125/184 (67.93%), Postives = 150/184 (81.52%), Query Frame = 1 Query: 214 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQV 765 ++YDE DSFDAM L+ LLRG+YAYGFE+PSAIQQR I+P KG DVI QAQSGTGKTATF LQ++D + CQAL+LAPTRELAQQI+KV+ A+GD++ V HAC+GGTSVR+D + LQ G VVVGTPGRV DM++R+ L+ D++KMFVLDEADEMLSRGF +QIYDIFQLLP QV Sbjct: 16 SNYDETTDSFDAMNLKAELLRGVYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISTLQKIDSNVKACQALILAPTRELAQQIQKVVVAIGDFMDVACHACIGGTSVRDDMKALQDGPQVVVGTPGRVHDMIQRRVLKTDHMKMFVLDEADEMLSRGFTEQIYDIFQLLPQSTQV 199 HSP 2 Score: 27.335 bits (59), Expect = 1.069e-68 Identity = 11/18 (61.11%), Postives = 14/18 (77.78%), Query Frame = 2 Query: 770 VFSATMPPEALEITRKFM 823 + SATMP + LE+T KFM Sbjct: 201 LLSATMPQDVLEVTTKFM 218
BLAST of CV712161 vs. ExPASy Swiss-Prot
Match: IF4A2_RAT (Eukaryotic initiation factor 4A-II OS=Rattus norvegicus GN=Eif4a2 PE=1 SV=1) HSP 1 Score: 252.677 bits (644), Expect = 1.393e-68 Identity = 128/185 (69.19%), Postives = 151/185 (81.62%), Query Frame = 1 Query: 214 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQA-GVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQV 765 ++++E+ D+FD M L+E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTATF ILQQL+ + QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR + + LQA H+VVGTPGRVFDML R+ L P +IKMFVLDEADEMLSRGFKDQIY+IFQ L +QV Sbjct: 26 SNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQV 210 HSP 2 Score: 28.4906 bits (62), Expect = 1.393e-68 Identity = 11/18 (61.11%), Postives = 15/18 (83.33%), Query Frame = 2 Query: 770 VFSATMPPEALEITRKFM 823 + SATMP + LE+T+KFM Sbjct: 212 LLSATMPTDVLEVTKKFM 229
BLAST of CV712161 vs. ExPASy Swiss-Prot
Match: IF4A2_PONAB (Eukaryotic initiation factor 4A-II OS=Pongo abelii GN=EIF4A2 PE=2 SV=1) HSP 1 Score: 252.677 bits (644), Expect = 1.393e-68 Identity = 128/185 (69.19%), Postives = 151/185 (81.62%), Query Frame = 1 Query: 214 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQA-GVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQV 765 ++++E+ D+FD M L+E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTATF ILQQL+ + QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR + + LQA H+VVGTPGRVFDML R+ L P +IKMFVLDEADEMLSRGFKDQIY+IFQ L +QV Sbjct: 26 SNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQV 210 HSP 2 Score: 28.4906 bits (62), Expect = 1.393e-68 Identity = 11/18 (61.11%), Postives = 15/18 (83.33%), Query Frame = 2 Query: 770 VFSATMPPEALEITRKFM 823 + SATMP + LE+T+KFM Sbjct: 212 LLSATMPTDVLEVTKKFM 229
BLAST of CV712161 vs. ExPASy Swiss-Prot
Match: IF4A2_MOUSE (Eukaryotic initiation factor 4A-II OS=Mus musculus GN=Eif4a2 PE=2 SV=2) HSP 1 Score: 252.677 bits (644), Expect = 1.393e-68 Identity = 128/185 (69.19%), Postives = 151/185 (81.62%), Query Frame = 1 Query: 214 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQA-GVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQV 765 ++++E+ D+FD M L+E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTATF ILQQL+ + QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR + + LQA H+VVGTPGRVFDML R+ L P +IKMFVLDEADEMLSRGFKDQIY+IFQ L +QV Sbjct: 26 SNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQV 210 HSP 2 Score: 28.4906 bits (62), Expect = 1.393e-68 Identity = 11/18 (61.11%), Postives = 15/18 (83.33%), Query Frame = 2 Query: 770 VFSATMPPEALEITRKFM 823 + SATMP + LE+T+KFM Sbjct: 212 LLSATMPTDVLEVTKKFM 229
BLAST of CV712161 vs. ExPASy Swiss-Prot
Match: IF4A2_HUMAN (Eukaryotic initiation factor 4A-II OS=Homo sapiens GN=EIF4A2 PE=1 SV=2) HSP 1 Score: 252.677 bits (644), Expect = 1.393e-68 Identity = 128/185 (69.19%), Postives = 151/185 (81.62%), Query Frame = 1 Query: 214 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQA-GVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQV 765 ++++E+ D+FD M L+E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTATF ILQQL+ + QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR + + LQA H+VVGTPGRVFDML R+ L P +IKMFVLDEADEMLSRGFKDQIY+IFQ L +QV Sbjct: 26 SNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQV 210 HSP 2 Score: 28.4906 bits (62), Expect = 1.393e-68 Identity = 11/18 (61.11%), Postives = 15/18 (83.33%), Query Frame = 2 Query: 770 VFSATMPPEALEITRKFM 823 + SATMP + LE+T+KFM Sbjct: 212 LLSATMPTDVLEVTKKFM 229
BLAST of CV712161 vs. ExPASy Swiss-Prot
Match: IF4A2_BOVIN (Eukaryotic initiation factor 4A-II OS=Bos taurus GN=EIF4A2 PE=2 SV=1) HSP 1 Score: 252.677 bits (644), Expect = 1.393e-68 Identity = 128/185 (69.19%), Postives = 151/185 (81.62%), Query Frame = 1 Query: 214 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQA-GVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQV 765 ++++E+ D+FD M L+E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTATF ILQQL+ + QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR + + LQA H+VVGTPGRVFDML R+ L P +IKMFVLDEADEMLSRGFKDQIY+IFQ L +QV Sbjct: 26 SNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQV 210 HSP 2 Score: 28.4906 bits (62), Expect = 1.393e-68 Identity = 11/18 (61.11%), Postives = 15/18 (83.33%), Query Frame = 2 Query: 770 VFSATMPPEALEITRKFM 823 + SATMP + LE+T+KFM Sbjct: 212 LLSATMPTDVLEVTKKFM 229
BLAST of CV712161 vs. ExPASy Swiss-Prot
Match: IF4A_ASPOR (ATP-dependent RNA helicase eIF4A OS=Aspergillus oryzae GN=tif1 PE=3 SV=1) HSP 1 Score: 253.447 bits (646), Expect = 1.816e-68 Identity = 126/199 (63.32%), Postives = 155/199 (77.89%), Query Frame = 1 Query: 169 TKMNELLSTDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQV 765 +++ L + GQ T+YDE+ DSFDAM L+ LLRG+YAYGFE+PSAIQQR I P KG DVI QAQSGTGKTATF LQ+LD + CQAL+LAPTRELAQQI+KV+ A+GD++ + HAC+GGT+VRED + L G VVVGTPGRV DM++R+ L+ D++K F+LDEADEMLSRGF +QIYDIFQLLP QV Sbjct: 27 SRLTRLFQSTGQ-IETNYDEITDSFDAMELKPELLRGVYAYGFERPSAIQQRAIKPIIKGSDVIAQAQSGTGKTATFSISALQKLDPNVKGCQALILAPTRELAQQIQKVVVAIGDFMNITCHACIGGTAVREDMKALGEGPEVVVGTPGRVHDMIQRRVLKTDHLKQFILDEADEMLSRGFTEQIYDIFQLLPQSTQV 224 HSP 2 Score: 27.335 bits (59), Expect = 1.816e-68 Identity = 11/18 (61.11%), Postives = 14/18 (77.78%), Query Frame = 2 Query: 770 VFSATMPPEALEITRKFM 823 + SATMP + LE+T KFM Sbjct: 226 LLSATMPQDVLEVTTKFM 243
BLAST of CV712161 vs. ExPASy Swiss-Prot
Match: IF4A_ASPCL (ATP-dependent RNA helicase eIF4A OS=Aspergillus clavatus GN=tif1 PE=3 SV=1) HSP 1 Score: 253.447 bits (646), Expect = 1.817e-68 Identity = 124/184 (67.39%), Postives = 151/184 (82.07%), Query Frame = 1 Query: 214 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQV 765 ++YDE+ DSFD+M L+ LLRGIYAYGFE+PSAIQQR I+P KG DVI QAQSGTGKTATF LQ++D L CQAL+LAPTRELAQQI+KV+ A+GD++ ++ HAC+GGT+VRED + LQ G VVVGTPGRV DM++R+ LR D +K+F+LDEADEMLSRGF +QIYDIFQLLP QV Sbjct: 18 SNYDEITDSFDSMDLKPELLRGIYAYGFERPSAIQQRAIMPIIKGSDVIAQAQSGTGKTATFSISALQKIDPNLKACQALILAPTRELAQQIQKVVVAIGDFMSLECHACIGGTNVREDMKALQDGPQVVVGTPGRVQDMIQRRVLRTDQMKLFILDEADEMLSRGFTEQIYDIFQLLPQSTQV 201 HSP 2 Score: 27.335 bits (59), Expect = 1.817e-68 Identity = 11/18 (61.11%), Postives = 14/18 (77.78%), Query Frame = 2 Query: 770 VFSATMPPEALEITRKFM 823 + SATMP + LE+T KFM Sbjct: 203 LLSATMPQDVLEVTTKFM 220
BLAST of CV712161 vs. ExPASy Swiss-Prot
Match: IF4A_CHAGB (ATP-dependent RNA helicase eIF4A OS=Chaetomium globosum GN=TIF1 PE=3 SV=1) HSP 1 Score: 253.062 bits (645), Expect = 2.370e-68 Identity = 123/184 (66.85%), Postives = 150/184 (81.52%), Query Frame = 1 Query: 214 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQV 765 ++YDE DSFD M L+ LLRGIYAYGFE+PSAIQQR I+P KG DVI QAQSGTGKTATF +LQ++D + CQAL+LAPTRELAQQI+KV+ A+GD++ ++ HAC+GGTSVR+D + LQ G V+VGTPGRV DM++R+ L+ D +KMFVLDEADEMLSRGF +QIYDIFQLLP QV Sbjct: 17 SNYDETVDSFDDMNLKSELLRGIYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISVLQKIDPTVKSCQALILAPTRELAQQIQKVVIAIGDFMNIECHACIGGTSVRDDMKALQDGPQVIVGTPGRVHDMIQRRILKTDQMKMFVLDEADEMLSRGFTEQIYDIFQLLPQSTQV 200 HSP 2 Score: 27.335 bits (59), Expect = 2.370e-68 Identity = 11/18 (61.11%), Postives = 14/18 (77.78%), Query Frame = 2 Query: 770 VFSATMPPEALEITRKFM 823 + SATMP + LE+T KFM Sbjct: 202 LLSATMPQDVLEVTTKFM 219 The following BLAST results are available for this feature:
BLAST of CV712161 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712161 ID=CV712161; Name=CV712161; organism=Citrus sinensis; type=EST; length=825bpback to top |