CV712161
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV712161 vs. ExPASy Swiss-Prot
Match: IF4A_AJECN (ATP-dependent RNA helicase eIF4A OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=TIF1 PE=3 SV=1) HSP 1 Score: 252.677 bits (644), Expect = 3.091e-68 Identity = 123/184 (66.85%), Postives = 149/184 (80.98%), Query Frame = 1 Query: 214 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQV 765 ++YDE+ DSFDAM L+ LLRG+YAYGFE+PSAIQQR I+P KG DVI QAQSGTGKTATF LQ++D L CQAL+LAPTRELAQQI+KV+ A+GD++ ++ HAC+GG SVRED + LQ G VVVGTPGRV DM++R+ L+ D++KMFVLDEADEMLS GF +QIYDIFQ LP QV Sbjct: 18 SNYDEITDSFDAMNLRAELLRGVYAYGFERPSAIQQRAIMPVIKGSDVIAQAQSGTGKTATFSISALQKVDTNLKACQALILAPTRELAQQIQKVVVAIGDFMSIECHACIGGISVREDMKALQDGPQVVVGTPGRVHDMIQRRVLKTDHMKMFVLDEADEMLSHGFTEQIYDIFQFLPQSTQV 201 HSP 2 Score: 27.335 bits (59), Expect = 3.091e-68 Identity = 11/18 (61.11%), Postives = 14/18 (77.78%), Query Frame = 2 Query: 770 VFSATMPPEALEITRKFM 823 + SATMP + LE+T KFM Sbjct: 203 LLSATMPQDVLEVTTKFM 220
BLAST of CV712161 vs. ExPASy Swiss-Prot
Match: IF4A2_MACFA (Eukaryotic initiation factor 4A-II OS=Macaca fascicularis GN=EIF4A2 PE=2 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 8.935e-68 Identity = 127/185 (68.65%), Postives = 150/185 (81.08%), Query Frame = 1 Query: 214 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQA-GVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQV 765 ++++E+ D+FD M L+E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTATF ILQQL+ + QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR + + LQA H+VVGTPGRVFDML R+ L P +IKMFVLDEAD MLSRGFKDQIY+IFQ L +QV Sbjct: 27 SNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADGMLSRGFKDQIYEIFQKLNTSIQV 211 HSP 2 Score: 28.4906 bits (62), Expect = 8.935e-68 Identity = 11/18 (61.11%), Postives = 15/18 (83.33%), Query Frame = 2 Query: 770 VFSATMPPEALEITRKFM 823 + SATMP + LE+T+KFM Sbjct: 213 LLSATMPTDVLEVTKKFM 230
BLAST of CV712161 vs. ExPASy Swiss-Prot
Match: IF4A_COCIM (ATP-dependent RNA helicase eIF4A OS=Coccidioides immitis GN=TIF1 PE=3 SV=1) HSP 1 Score: 251.906 bits (642), Expect = 1.165e-67 Identity = 124/184 (67.39%), Postives = 149/184 (80.98%), Query Frame = 1 Query: 214 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQV 765 ++YDE+ DSFDAM L+ LLRG+YAYGFE+PSAIQQR I+P KG DVI QAQSGTGKTATF LQ++D L CQAL+LAPTRELAQQI+KV+ A+GD++ V+ HAC+GGT+VRED + L G VVVGTPGRV DM++R+ L+ D +KMFVLDEADEMLSRGF +QIYDIFQ LP QV Sbjct: 18 SNYDEITDSFDAMNLRAELLRGVYAYGFERPSAIQQRAIMPVIKGSDVIAQAQSGTGKTATFSISALQKVDTNLKACQALILAPTRELAQQIQKVVVAIGDFMSVECHACIGGTNVREDIKALNDGPQVVVGTPGRVHDMIQRRVLKTDQMKMFVLDEADEMLSRGFTEQIYDIFQFLPQSTQV 201 HSP 2 Score: 26.1794 bits (56), Expect = 1.165e-67 Identity = 10/18 (55.56%), Postives = 14/18 (77.78%), Query Frame = 2 Query: 770 VFSATMPPEALEITRKFM 823 + SATMP + L++T KFM Sbjct: 203 LLSATMPQDVLDVTTKFM 220
BLAST of CV712161 vs. ExPASy Swiss-Prot
Match: IF4A1_PONAB (Eukaryotic initiation factor 4A-I OS=Pongo abelii GN=EIF4A1 PE=2 SV=1) HSP 1 Score: 248.44 bits (633), Expect = 2.584e-67 Identity = 127/185 (68.65%), Postives = 147/185 (79.46%), Query Frame = 1 Query: 214 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR-EDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQV 765 ++++E+ DS D M L E+LLRGIYAYGFEKPSAIQQR I+ KG DVI QAQSGTGKTATF ILQQ++ L QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR E Q++ H++VGTPGRVFDML R+ L P YIKMFVLDEADEMLSRGFKDQIYDIFQ L + QV Sbjct: 25 SNWNEIVDSLDDMNLSESLLRGIYAYGFEKPSAIQQRAILSCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQV 209 HSP 2 Score: 28.4906 bits (62), Expect = 2.584e-67 Identity = 11/18 (61.11%), Postives = 15/18 (83.33%), Query Frame = 2 Query: 770 VFSATMPPEALEITRKFM 823 + SATMP + LE+T+KFM Sbjct: 211 LLSATMPSDVLEVTKKFM 228
BLAST of CV712161 vs. ExPASy Swiss-Prot
Match: IF4A_EMENI (ATP-dependent RNA helicase eIF4A OS=Emericella nidulans GN=tif1 PE=3 SV=1) HSP 1 Score: 248.44 bits (633), Expect = 5.728e-67 Identity = 118/184 (64.13%), Postives = 150/184 (81.52%), Query Frame = 1 Query: 214 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQV 765 ++YDE+ DSFD+M L+ LLRG+YAYGFE+PSAIQQR I+P KG DVI QAQSGTGKTATF LQ+LD + CQAL++APTRELAQQI+KV+ A+GD++ ++ HAC+GGT+VR+D L+ G +VVGTPGR+ DM++R+ L+ D +KMF+LDEADEMLSRGF +QIYDIFQLLP QV Sbjct: 41 SNYDEITDSFDSMELKPELLRGVYAYGFERPSAIQQRAILPIVKGNDVIAQAQSGTGKTATFSISALQKLDPNVKACQALIVAPTRELAQQIQKVVIAIGDFMNIQCHACIGGTAVRDDMNALREGPQIVVGTPGRIHDMIQRRVLKTDQMKMFILDEADEMLSRGFTEQIYDIFQLLPQSTQV 224 HSP 2 Score: 27.335 bits (59), Expect = 5.728e-67 Identity = 11/18 (61.11%), Postives = 14/18 (77.78%), Query Frame = 2 Query: 770 VFSATMPPEALEITRKFM 823 + SATMP + LE+T KFM Sbjct: 226 LLSATMPQDVLEVTTKFM 243
BLAST of CV712161 vs. ExPASy Swiss-Prot
Match: IF4A_ASPNC (ATP-dependent RNA helicase eIF4A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=tif1 PE=3 SV=1) HSP 1 Score: 248.44 bits (633), Expect = 5.731e-67 Identity = 120/184 (65.22%), Postives = 148/184 (80.43%), Query Frame = 1 Query: 214 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQV 765 T+YDEV DSFD+M L+ LLRG+YAYGFE+PSAIQQR I P G DVI QAQSGTGKTATF LQ++D L CQAL++APTRELAQQI+KV+ A+GD++ ++ HAC+GGT+VR+D L+AG VVVGTPGR+ DM+ R+ L+ D +K+F+LDEADEMLSRGF +QIYDIFQLLP QV Sbjct: 18 TNYDEVTDSFDSMDLKPELLRGVYAYGFERPSAIQQRAIKPIIAGHDVIAQAQSGTGKTATFSISALQKIDQELKACQALIVAPTRELAQQIQKVVVAIGDFMNIECHACIGGTNVRDDMNALRAGPQVVVGTPGRIHDMIERRVLKTDQMKLFILDEADEMLSRGFTEQIYDIFQLLPQSTQV 201 HSP 2 Score: 27.335 bits (59), Expect = 5.731e-67 Identity = 11/18 (61.11%), Postives = 14/18 (77.78%), Query Frame = 2 Query: 770 VFSATMPPEALEITRKFM 823 + SATMP + LE+T KFM Sbjct: 203 LLSATMPQDVLEVTTKFM 220
BLAST of CV712161 vs. ExPASy Swiss-Prot
Match: IF4A_CAEEL (Eukaryotic initiation factor 4A OS=Caenorhabditis elegans GN=inf-1 PE=2 SV=1) HSP 1 Score: 248.44 bits (633), Expect = 9.745e-67 Identity = 128/200 (64.00%), Postives = 155/200 (77.50%), Query Frame = 1 Query: 166 DTKMNELLSTDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQV 765 D ++ ++ DG +YD+V +SFD M L+E LLRGIY +GFEKPSAIQ+R IVP G DVI QAQSGTGKTATF ILQ++D+ QALV+APTRELAQQI+KVM ALG+YL V + C+GGTSVR+DQR L+AG+HVVVGTPGRV DM+ R +L IKMFVLDEADEMLSRGFKDQIY++F+ +P VQV Sbjct: 7 DVNVSSVVDADGL-IEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQRKLEAGIHVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLSRGFKDQIYEVFRSMPQDVQV 205 HSP 2 Score: 26.5646 bits (57), Expect = 9.745e-67 Identity = 10/18 (55.56%), Postives = 14/18 (77.78%), Query Frame = 2 Query: 770 VFSATMPPEALEITRKFM 823 + SATMP E L++T +FM Sbjct: 207 LLSATMPSEVLDVTNRFM 224
BLAST of CV712161 vs. ExPASy Swiss-Prot
Match: IF4A_CRYPV (Eukaryotic initiation factor 4A OS=Cryptosporidium parvum GN=EIF4-A PE=2 SV=1) HSP 1 Score: 247.669 bits (631), Expect = 2.161e-66 Identity = 124/187 (66.31%), Postives = 149/187 (79.68%), Query Frame = 1 Query: 214 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGGF 774 ++YDE+ + F+A+ L+ +LLRGI+AYGFEKPSAIQQRGI P G D I QAQSGTGKTATF LQ++DY L CQ L+LAPTRELAQQI+KV ALGDY ++ HACVGGTSVR+D L++GVH+VVGTPGRVFDML + LR D +K+F+LDEADEMLSRGFK QI+DIF+ LP VQV F Sbjct: 24 SNYDEIVECFEALNLEGDLLRGIFAYGFEKPSAIQQRGIKPILDGYDTIGQAQSGTGKTATFVIAALQKIDYSLNACQVLLLAPTRELAQQIQKVALALGDYCELRCHACVGGTSVRDDMNKLKSGVHMVVGTPGRVFDMLDKGYLRVDNLKLFILDEADEMLSRGFKVQIHDIFKKLPQDVQVALF 210 HSP 2 Score: 26.1794 bits (56), Expect = 2.161e-66 Identity = 11/18 (61.11%), Postives = 14/18 (77.78%), Query Frame = 2 Query: 770 VFSATMPPEALEITRKFM 823 +FSATMP E L +T +FM Sbjct: 209 LFSATMPNEILHLTTQFM 226
BLAST of CV712161 vs. ExPASy Swiss-Prot
Match: IF4A_USTMA (ATP-dependent RNA helicase eIF4A OS=Ustilago maydis GN=TIF1 PE=3 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 6.247e-66 Identity = 122/195 (62.56%), Postives = 150/195 (76.92%), Query Frame = 1 Query: 178 NELLSTDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQ 762 N L DG+ ++++ V D+FD M L+E LLRG+YAYGFE+PSAIQ R IVP KG DVI QAQSGTGKTATF ILQ++D + QAL+LAPTRELAQQI+KV+ ALGDY+ + HAC+GGT+VRED L G VVVGTPGRV+DM+ R++ + D +KMF LDEADEMLSRGFKDQ+Y++FQLLP Q Sbjct: 20 NNLNIADGE-IESNWETVIDNFDNMELKEELLRGVYAYGFERPSAIQARAIVPVIKGHDVIAQAQSGTGKTATFSIAILQRIDPSIKAVQALILAPTRELAQQIQKVVIALGDYMKIDCHACIGGTNVREDMAKLNEGAQVVVGTPGRVYDMINRRAFKTDQLKMFCLDEADEMLSRGFKDQMYEVFQLLPQDTQ 213 HSP 2 Score: 29.6462 bits (65), Expect = 6.247e-66 Identity = 12/18 (66.67%), Postives = 15/18 (83.33%), Query Frame = 2 Query: 770 VFSATMPPEALEITRKFM 823 + SATMP E LE+T+KFM Sbjct: 216 LLSATMPQEVLEVTKKFM 233
BLAST of CV712161 vs. ExPASy Swiss-Prot
Match: IF4A_ASPTN (ATP-dependent RNA helicase eIF4A OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=tif1 PE=3 SV=2) HSP 1 Score: 244.973 bits (624), Expect = 6.249e-66 Identity = 116/184 (63.04%), Postives = 150/184 (81.52%), Query Frame = 1 Query: 214 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQV 765 ++Y++V DSFD+M L+ LLRG+YAYGFE+PSAIQQR I+P KG DVI QAQSGTGKTATF LQ++D L CQAL++APTRELAQQI+KV+ A+GD++ + HAC+GGT++R+D + LQ G +VVGTPGR+ DM++R+ L+ D +K+F+LDEADEMLSRGF +QIYDIFQLLP QV Sbjct: 16 SNYEDVTDSFDSMELKAELLRGVYAYGFERPSAIQQRAIMPIIKGNDVIAQAQSGTGKTATFSISALQKIDPNLKACQALIVAPTRELAQQIQKVVVAIGDFMNINCHACIGGTAIRDDMKALQEGPPIVVGTPGRIQDMIQRRVLKTDQMKLFILDEADEMLSRGFTEQIYDIFQLLPQATQV 199 HSP 2 Score: 27.335 bits (59), Expect = 6.249e-66 Identity = 11/18 (61.11%), Postives = 14/18 (77.78%), Query Frame = 2 Query: 770 VFSATMPPEALEITRKFM 823 + SATMP + LE+T KFM Sbjct: 201 LLSATMPQDVLEVTTKFM 218 The following BLAST results are available for this feature:
BLAST of CV712161 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712161 ID=CV712161; Name=CV712161; organism=Citrus sinensis; type=EST; length=825bpback to top |