CV712161
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV712161 vs. ExPASy Swiss-Prot
Match: IF4A3_CHICK (Eukaryotic initiation factor 4A-III OS=Gallus gallus GN=EIF4A3 PE=2 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 1.375e-62 Identity = 122/188 (64.89%), Postives = 147/188 (78.19%), Query Frame = 1 Query: 205 DFFTSYD-EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQV 765 +F TS + +V +FD MGL+E+LLRGIYAYGFEKPSAIQQR I KG DVI Q+QSGTGKTATF +LQ LD + + QAL+LAPTRELA QI+K + ALGDY+ V+ HAC+GGT+V ED R L G HVV GTPGRVFDM+RR+SLR IKM VLDEADEML++GFK+QIYD+++ LP QV Sbjct: 28 EFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQV 215 HSP 2 Score: 26.1794 bits (56), Expect = 1.375e-62 Identity = 11/18 (61.11%), Postives = 14/18 (77.78%), Query Frame = 2 Query: 770 VFSATMPPEALEITRKFM 823 + SAT+P E LE+T KFM Sbjct: 217 LISATLPHEILEMTNKFM 234
BLAST of CV712161 vs. ExPASy Swiss-Prot
Match: IF4A3_TAEGU (Eukaryotic initiation factor 4A-III OS=Taeniopygia guttata GN=EIF4A3 PE=2 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 1.375e-62 Identity = 122/188 (64.89%), Postives = 147/188 (78.19%), Query Frame = 1 Query: 205 DFFTSYD-EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQV 765 +F TS + +V +FD MGL+E+LLRGIYAYGFEKPSAIQQR I KG DVI Q+QSGTGKTATF +LQ LD + + QAL+LAPTRELA QI+K + ALGDY+ V+ HAC+GGT+V ED R L G HVV GTPGRVFDM+RR+SLR IKM VLDEADEML++GFK+QIYD+++ LP QV Sbjct: 26 EFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQV 213 HSP 2 Score: 26.1794 bits (56), Expect = 1.375e-62 Identity = 11/18 (61.11%), Postives = 14/18 (77.78%), Query Frame = 2 Query: 770 VFSATMPPEALEITRKFM 823 + SAT+P E LE+T KFM Sbjct: 215 LISATLPHEILEMTNKFM 232
BLAST of CV712161 vs. ExPASy Swiss-Prot
Match: IF4A3_MOUSE (Eukaryotic initiation factor 4A-III OS=Mus musculus GN=Eif4a3 PE=2 SV=3) HSP 1 Score: 234.958 bits (598), Expect = 1.375e-62 Identity = 122/188 (64.89%), Postives = 147/188 (78.19%), Query Frame = 1 Query: 205 DFFTSYD-EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQV 765 +F TS + +V +FD MGL+E+LLRGIYAYGFEKPSAIQQR I KG DVI Q+QSGTGKTATF +LQ LD + + QAL+LAPTRELA QI+K + ALGDY+ V+ HAC+GGT+V ED R L G HVV GTPGRVFDM+RR+SLR IKM VLDEADEML++GFK+QIYD+++ LP QV Sbjct: 27 EFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSVSVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQV 214 HSP 2 Score: 26.1794 bits (56), Expect = 1.375e-62 Identity = 11/18 (61.11%), Postives = 14/18 (77.78%), Query Frame = 2 Query: 770 VFSATMPPEALEITRKFM 823 + SAT+P E LE+T KFM Sbjct: 216 LISATLPHEILEMTNKFM 233
BLAST of CV712161 vs. ExPASy Swiss-Prot
Match: IF4A3_HUMAN (Eukaryotic initiation factor 4A-III OS=Homo sapiens GN=EIF4A3 PE=1 SV=4) HSP 1 Score: 234.958 bits (598), Expect = 1.375e-62 Identity = 122/188 (64.89%), Postives = 147/188 (78.19%), Query Frame = 1 Query: 205 DFFTSYD-EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQV 765 +F TS + +V +FD MGL+E+LLRGIYAYGFEKPSAIQQR I KG DVI Q+QSGTGKTATF +LQ LD + + QAL+LAPTRELA QI+K + ALGDY+ V+ HAC+GGT+V ED R L G HVV GTPGRVFDM+RR+SLR IKM VLDEADEML++GFK+QIYD+++ LP QV Sbjct: 27 EFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQV 214 HSP 2 Score: 26.1794 bits (56), Expect = 1.375e-62 Identity = 11/18 (61.11%), Postives = 14/18 (77.78%), Query Frame = 2 Query: 770 VFSATMPPEALEITRKFM 823 + SAT+P E LE+T KFM Sbjct: 216 LISATLPHEILEMTNKFM 233
BLAST of CV712161 vs. ExPASy Swiss-Prot
Match: FAL1_USTMA (ATP-dependent RNA helicase FAL1 OS=Ustilago maydis GN=FAL1 PE=3 SV=1) HSP 1 Score: 233.032 bits (593), Expect = 8.812e-62 Identity = 117/180 (65.00%), Postives = 142/180 (78.89%), Query Frame = 1 Query: 226 EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQV 765 +V +FDAMGL+E+LLRGIYAY FEKPSAIQQR I+P +G DVI QAQSGTGKTATF +LQ +D L + QALVL+PTRELA QI+ V+ ALGDYL V+ HAC+GGTSV ED R L G H+V GTPGRV+DM+RR+ LR IKM +LDE+DE+L+ GFKDQIYD+++ LP QV Sbjct: 21 KVATTFDAMGLKEDLLRGIYAYNFEKPSAIQQRAILPIIRGRDVIAQAQSGTGKTATFSISMLQSIDTTLRETQALVLSPTRELAIQIQSVVLALGDYLNVQCHACIGGTSVGEDIRKLDYGQHIVSGTPGRVYDMIRRRHLRTKNIKMLILDESDELLNMGFKDQIYDVYRYLPPSTQV 200 HSP 2 Score: 25.409 bits (54), Expect = 8.812e-62 Identity = 10/18 (55.56%), Postives = 14/18 (77.78%), Query Frame = 2 Query: 770 VFSATMPPEALEITRKFM 823 + SAT+P + LE+T KFM Sbjct: 202 LLSATLPQDVLEMTSKFM 219
BLAST of CV712161 vs. ExPASy Swiss-Prot
Match: IF4A3_MACFA (Eukaryotic initiation factor 4A-III OS=Macaca fascicularis GN=EIF4A3 PE=2 SV=3) HSP 1 Score: 231.491 bits (589), Expect = 1.498e-61 Identity = 120/188 (63.83%), Postives = 145/188 (77.13%), Query Frame = 1 Query: 205 DFFTSYD-EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQV 765 +F TS + +V +FD MGL+E+LLRGIYAYGFEKPSAIQQR I KG DVI Q+QSGTGKTATF +LQ LD + + QAL+LAP RELA QI+K + LGDY+ V+ HAC+GGT+V ED R L G HVV GTPGRVFDM+RR+SLR IKM VLDEADEML++GFK+QIYD+++ LP QV Sbjct: 27 EFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPARELAVQIQKGLLTLGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQV 214 HSP 2 Score: 26.1794 bits (56), Expect = 1.498e-61 Identity = 11/18 (61.11%), Postives = 14/18 (77.78%), Query Frame = 2 Query: 770 VFSATMPPEALEITRKFM 823 + SAT+P E LE+T KFM Sbjct: 216 LISATLPHEILEMTNKFM 233
BLAST of CV712161 vs. ExPASy Swiss-Prot
Match: FAL1_CRYNE (ATP-dependent RNA helicase FAL1 OS=Cryptococcus neoformans GN=FAL1 PE=3 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 2.547e-61 Identity = 116/179 (64.80%), Postives = 142/179 (79.33%), Query Frame = 1 Query: 229 VYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQV 765 V +F+A+ L+E+LLRGIYAY FEKPSAIQQR I+P +G DVI QAQSGTGKTATF +LQ +D L + QALVL+PTRELA QI+ V+ ALGDY+ V HAC+GGTSV ED R L+AG VV GTPGRVFDM+RR++LR IKM +LDE+DE+L++GFKDQIYDI++ LP QV Sbjct: 21 VAPTFEALNLKEDLLRGIYAYNFEKPSAIQQRAIIPIIRGRDVIAQAQSGTGKTATFSISMLQSIDTNLRETQALVLSPTRELAVQIQTVVLALGDYMNVSCHACIGGTSVGEDIRKLEAGQQVVSGTPGRVFDMIRRRNLRTKDIKMLILDESDELLNKGFKDQIYDIYRYLPPATQV 199 HSP 2 Score: 25.7942 bits (55), Expect = 2.547e-61 Identity = 11/18 (61.11%), Postives = 14/18 (77.78%), Query Frame = 2 Query: 770 VFSATMPPEALEITRKFM 823 V SAT+P + LE+T KFM Sbjct: 201 VVSATLPHDVLEMTTKFM 218
BLAST of CV712161 vs. ExPASy Swiss-Prot
Match: RH34_ORYSJ (DEAD-box ATP-dependent RNA helicase 34 OS=Oryza sativa subsp. japonica GN=Os03g0566800 PE=2 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 5.645e-61 Identity = 111/180 (61.67%), Postives = 142/180 (78.89%), Query Frame = 1 Query: 226 EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQV 765 EV SFD MG++E+LLRGIYAYGFEKPSAIQQR ++P G DVI QAQSGTGKT+ + Q +D + + QAL+L+PTRELA Q E+VM A+GDY+ ++VHAC+GG S+ ED R L+ GVHVV GTPGRV DM++R++LR IK+ +LDEADEML RGFKDQIYD+++ LP ++QV Sbjct: 28 EVISSFDQMGIREDLLRGIYAYGFEKPSAIQQRAVLPIISGRDVIAQAQSGTGKTSMISLSVCQIVDTAVREVQALILSPTRELAAQTERVMLAIGDYINIQVHACIGGKSIGEDIRKLEHGVHVVSGTPGRVCDMIKRRTLRTRAIKLLILDEADEMLGRGFKDQIYDVYRYLPPELQV 207 HSP 2 Score: 25.7942 bits (55), Expect = 5.645e-61 Identity = 11/18 (61.11%), Postives = 14/18 (77.78%), Query Frame = 2 Query: 770 VFSATMPPEALEITRKFM 823 + SAT+P E LE+T KFM Sbjct: 209 LISATLPHEILEMTSKFM 226
BLAST of CV712161 vs. ExPASy Swiss-Prot
Match: IF4A_ASHGO (ATP-dependent RNA helicase eIF4A OS=Ashbya gossypii GN=TIF1 PE=3 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 1.252e-60 Identity = 112/196 (57.14%), Postives = 144/196 (73.47%), Query Frame = 1 Query: 178 NELLSTDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQV 765 + + + + + T+YD++ FD + L+E LLRGIY YGF PSAIQQR I+P +G DV+ QAQSGTGKT TF LQ++D + QAL+LAPTRELA QI+KV+ AL ++ VKVHAC+GGT RED L+AG +VVGTPGRVFDM+ R++ + D+IKMF+LDEADEMLS GFK+QIY IF +LP QV Sbjct: 3 DSITNPENSEIQTNYDKIVHKFDELKLKEVLLRGIYGYGFVDPSAIQQRAILPIIEGHDVLAQAQSGTGKTGTFSIAALQRIDESIKAPQALILAPTRELALQIQKVVMALALHMDVKVHACIGGTDPREDAEALRAGAQIVVGTPGRVFDMIERRNFKTDHIKMFILDEADEMLSSGFKEQIYKIFTMLPPTTQV 198 HSP 2 Score: 26.9498 bits (58), Expect = 1.252e-60 Identity = 11/18 (61.11%), Postives = 14/18 (77.78%), Query Frame = 2 Query: 770 VFSATMPPEALEITRKFM 823 + SATMP E L++T KFM Sbjct: 200 LLSATMPKEVLDVTDKFM 217
BLAST of CV712161 vs. ExPASy Swiss-Prot
Match: RH2_ORYSJ (DEAD-box ATP-dependent RNA helicase 2 OS=Oryza sativa subsp. japonica GN=Os01g0639100 PE=2 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 3.616e-60 Identity = 109/180 (60.56%), Postives = 142/180 (78.89%), Query Frame = 1 Query: 226 EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQV 765 EV SFD MG++++LLRGIYAYGFEKPSAIQQR ++P G DVI QAQSGTGKT+ + Q +D + + QAL+L+PTRELA Q E+VM A+GD++ ++VHAC+GG S+ ED R L+ GVHVV GTPGRV DM++R++LR IK+ +LDEADEML RGFKDQIYD+++ LP ++QV Sbjct: 28 EVISSFDQMGIRDDLLRGIYAYGFEKPSAIQQRAVLPIISGRDVIAQAQSGTGKTSMISLSVCQIVDTAVREVQALILSPTRELAAQTERVMLAIGDFINIQVHACIGGKSIGEDIRKLEHGVHVVSGTPGRVCDMIKRRTLRTRAIKLLILDEADEMLGRGFKDQIYDVYRYLPPELQV 207 HSP 2 Score: 25.7942 bits (55), Expect = 3.616e-60 Identity = 11/18 (61.11%), Postives = 14/18 (77.78%), Query Frame = 2 Query: 770 VFSATMPPEALEITRKFM 823 + SAT+P E LE+T KFM Sbjct: 209 LISATLPHEILEMTSKFM 226 The following BLAST results are available for this feature:
BLAST of CV712161 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712161 ID=CV712161; Name=CV712161; organism=Citrus sinensis; type=EST; length=825bpback to top |