CX301945
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX301945 vs. ExPASy Swiss-Prot
Match: TBA_AVESA (Tubulin alpha chain OS=Avena sativa GN=TUBA PE=2 SV=1) HSP 1 Score: 399.823 bits (1026), Expect = 6.761e-111 Identity = 190/213 (89.20%), Postives = 205/213 (96.24%), Query Frame = 3 Query: 42 SPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAIYDICRRQLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDITEFQTNLVPYPRIHFMLSSYAPIISAEKAYHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCMMYRGDVVPKDVNASIATIKTKRTIQFVDWCPTGFKAGINYQPPTVVPGGDLAKVMRAVCMISNSTAIAE 680 SPQVSTAVVEPYNSVLSTHSLLEHTDVAV+LDNEAIYDICRR LDIERPTYTNLNRLI+Q+ISSLT SLRFDGA+NVD+TEFQTNLVPYPRIHFMLSSYAP+ISAEKAYHEQLSV EITN+ FEP+SMMAKCDPRHGKYMACC+MYRGDVVPKDVNA++ TIKTKRT+QFVD CPTGFK GINYQPP+VVPGGDLAKV RAVCMISN+TA+AE Sbjct: 174 SPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVVTIKTKRTVQFVDXCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAE 386
BLAST of CX301945 vs. ExPASy Swiss-Prot
Match: TBA2_ANEPH (Tubulin alpha-2 chain (Fragment) OS=Anemia phyllitidis GN=TUBA2 PE=2 SV=1) HSP 1 Score: 399.438 bits (1025), Expect = 8.830e-111 Identity = 191/214 (89.25%), Postives = 206/214 (96.26%), Query Frame = 3 Query: 42 SPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAIYDICRRQL-DIERPTYTNLNRLIAQVISSLTASLRFDGALNVDITEFQTNLVPYPRIHFMLSSYAPIISAEKAYHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCMMYRGDVVPKDVNASIATIKTKRTIQFVDWCPTGFKAGINYQPPTVVPGGDLAKVMRAVCMISNSTAIAE 680 SPQVSTAVVEPYNSVLSTHSLLEHTDVAV+LDNEAIYDICRR L DIERPTYTNLNRL++Q+ISSLT SLRFDGALNVD+TEFQTNLVPYPRIHFMLSSYAP+ISA KAYHEQLSV EITN+ FEP+SMMAKCDPRHGKYMACC+MYRGDVVPKDVNA++ATIKTKRT+QFVDWCPTGFK GINYQPP+VVPGGDLAKV RAVCMISN+TA+AE Sbjct: 89 SPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLLDIERPTYTNLNRLVSQIISSLTTSLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAE 302
BLAST of CX301945 vs. ExPASy Swiss-Prot
Match: TBA_TRYBR (Tubulin alpha chain OS=Trypanosoma brucei rhodesiense PE=3 SV=1) HSP 1 Score: 397.127 bits (1019), Expect = 4.382e-110 Identity = 191/213 (89.67%), Postives = 204/213 (95.77%), Query Frame = 3 Query: 42 SPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAIYDICRRQLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDITEFQTNLVPYPRIHFMLSSYAPIISAEKAYHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCMMYRGDVVPKDVNASIATIKTKRTIQFVDWCPTGFKAGINYQPPTVVPGGDLAKVMRAVCMISNSTAIAE 680 SPQVSTAVVEPYNSVLSTHSLLEHTDVA MLDNEAIYD+ RR LDIERPTYTNLNRLI QV+SSLTASLRFDGALNVD+TEFQTNLVPYPRIHF+L+SYAP+ISAEKAYHEQLSV+EI+N+ FEPASMM KCDPRHGKYMACC+MYRGDVVPKDVNA++ATIKTKRTIQFVDW PTGFK GINYQPPTVVPGGDLAKV RAVCMI+NSTAIAE Sbjct: 174 SPQVSTAVVEPYNSVLSTHSLLEHTDVAAMLDNEAIYDLTRRNLDIERPTYTNLNRLIGQVVSSLTASLRFDGALNVDLTEFQTNLVPYPRIHFVLTSYAPVISAEKAYHEQLSVSEISNAVFEPASMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWSPTGFKCGINYQPPTVVPGGDLAKVQRAVCMIANSTAIAE 386
BLAST of CX301945 vs. ExPASy Swiss-Prot
Match: TBA1_PELFA (Tubulin alpha-1 chain OS=Pelvetia fastigiata GN=TUBA1 PE=2 SV=1) HSP 1 Score: 396.741 bits (1018), Expect = 5.723e-110 Identity = 187/213 (87.79%), Postives = 202/213 (94.84%), Query Frame = 3 Query: 42 SPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAIYDICRRQLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDITEFQTNLVPYPRIHFMLSSYAPIISAEKAYHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCMMYRGDVVPKDVNASIATIKTKRTIQFVDWCPTGFKAGINYQPPTVVPGGDLAKVMRAVCMISNSTAIAE 680 +PQV+TAVVEPYNSVLSTH+LLEHTD LDNEA+YD+CRR LDIERPTYTNLNRL+AQVISSLTASLRFDGALNVD+TEFQTNLVPYPRIHFML+SYAPIISAEKAYHEQLSVAEITNS FEPA MM KCDPRHGKYMACC+MYRGDVVPKDVNA++ATIKTKRTIQFVDWCPTGFK GINYQPPT VPGGDLA+V RAVCM++N+TAIAE Sbjct: 174 APQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEITNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTAVPGGDLARVQRAVCMVANTTAIAE 386
BLAST of CX301945 vs. ExPASy Swiss-Prot
Match: TBA2_PELFA (Tubulin alpha-2 chain OS=Pelvetia fastigiata GN=TUBA2 PE=2 SV=1) HSP 1 Score: 396.356 bits (1017), Expect = 7.475e-110 Identity = 187/213 (87.79%), Postives = 202/213 (94.84%), Query Frame = 3 Query: 42 SPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAIYDICRRQLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDITEFQTNLVPYPRIHFMLSSYAPIISAEKAYHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCMMYRGDVVPKDVNASIATIKTKRTIQFVDWCPTGFKAGINYQPPTVVPGGDLAKVMRAVCMISNSTAIAE 680 +PQV+TAVVEPYNSVLSTH+LLEHTD LDNEA+YD+CRR LDIERPTYTNLNRL+AQVISSLTASLRFDGALNVD+TEFQTNLVPYPRIHFML+SYAPIISAEKAYHEQLSVAEITNS FEPA MM CDPRHGKYMACC+MYRGDVVPKDVNA++ATIKTKRTIQFVDWCPTGFK GINYQPPTVVPGGDLA+V RAVCM++N+TAIAE Sbjct: 174 APQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEITNSVFEPAGMMTNCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAE 386
BLAST of CX301945 vs. ExPASy Swiss-Prot
Match: TBAE_PHYPO (Tubulin alpha-2B chain OS=Physarum polycephalum GN=ALTBE PE=2 SV=1) HSP 1 Score: 395.586 bits (1015), Expect = 1.275e-109 Identity = 187/213 (87.79%), Postives = 204/213 (95.77%), Query Frame = 3 Query: 42 SPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAIYDICRRQLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDITEFQTNLVPYPRIHFMLSSYAPIISAEKAYHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCMMYRGDVVPKDVNASIATIKTKRTIQFVDWCPTGFKAGINYQPPTVVPGGDLAKVMRAVCMISNSTAIAE 680 SPQVSTAVVEPYNSVLSTH LLEHTDVA MLDNEAIYD+C+R LDIERP+Y NLNRL+AQVISSLT SLRFDGALNVDITEFQTNLVPYPRIHFML+SYAP+ISAEKA+HEQLSVAE+TN+ F+P+SMMAKCDPRHGKYMACC+MYRGDVVPKDVNA++A IKTKRTIQFVDWCPTGFK GINYQPP+VVPGGDLAKV RA+CMISN+TAIAE Sbjct: 174 SPQVSTAVVEPYNSVLSTHGLLEHTDVAFMLDNEAIYDLCKRSLDIERPSYANLNRLVAQVISSLTTSLRFDGALNVDITEFQTNLVPYPRIHFMLASYAPVISAEKAFHEQLSVAELTNTVFDPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVAVIKTKRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRALCMISNTTAIAE 386
BLAST of CX301945 vs. ExPASy Swiss-Prot
Match: TBA2_ELEIN (Tubulin alpha-2 chain OS=Eleusine indica GN=TUBA2 PE=2 SV=1) HSP 1 Score: 393.275 bits (1009), Expect = 6.328e-109 Identity = 187/213 (87.79%), Postives = 202/213 (94.84%), Query Frame = 3 Query: 42 SPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAIYDICRRQLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDITEFQTNLVPYPRIHFMLSSYAPIISAEKAYHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCMMYRGDVVPKDVNASIATIKTKRTIQFVDWCPTGFKAGINYQPPTVVPGGDLAKVMRAVCMISNSTAIAE 680 SPQ+STAVVEPYNSVLSTHSL+EHTDV V+LDNEAIYDIC+R LDIERPTYTNLNRLI+QVISSLT SLRFDGA+NVDITEFQTNLVPYPRIHFMLSSYAPIIS EKAYHEQ SV EITNS FE +S+MAKCDPRHGKYMACC+MYRGDVVPKDVNA++ +IKTKRT+QFVDWCPTGFK GINYQPPTVVPGGDLAKV RAVCMISN+TA+AE Sbjct: 174 SPQISTAVVEPYNSVLSTHSLIEHTDVVVLLDNEAIYDICKRSLDIERPTYTNLNRLISQVISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPIISVEKAYHEQHSVPEITNSVFESSSVMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVHSIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAE 386
BLAST of CX301945 vs. ExPASy Swiss-Prot
Match: TBA_TRYCR (Tubulin alpha chain OS=Trypanosoma cruzi PE=3 SV=1) HSP 1 Score: 392.504 bits (1007), Expect = 1.079e-108 Identity = 188/213 (88.26%), Postives = 203/213 (95.31%), Query Frame = 3 Query: 42 SPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAIYDICRRQLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDITEFQTNLVPYPRIHFMLSSYAPIISAEKAYHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCMMYRGDVVPKDVNASIATIKTKRTIQFVDWCPTGFKAGINYQPPTVVPGGDLAKVMRAVCMISNSTAIAE 680 SPQVSTAVVEPYNSVLSTHSLLEHTDVA MLDNEAIYD+ R LDIERPTYTNLNRLI QV+S+LTASLRFDGALNVD+TEFQTNLVPYPRIHF+L++YAP+ISAEKAYHEQLSV+EI+N+ FEPASMM KCDPRHGKYMACC+MYRGDVVPKDVNA++ATIKTKRTIQFVDW PTGFK GINYQPPTVVPGGDLAKV RAVCMI+NSTAIAE Sbjct: 174 SPQVSTAVVEPYNSVLSTHSLLEHTDVAAMLDNEAIYDLTRANLDIERPTYTNLNRLIGQVVSALTASLRFDGALNVDLTEFQTNLVPYPRIHFVLTTYAPVISAEKAYHEQLSVSEISNAVFEPASMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWSPTGFKCGINYQPPTVVPGGDLAKVQRAVCMIANSTAIAE 386
BLAST of CX301945 vs. ExPASy Swiss-Prot
Match: TBA3_MAIZE (Tubulin alpha-3 chain OS=Zea mays GN=TUBA3 PE=2 SV=1) HSP 1 Score: 392.504 bits (1007), Expect = 1.079e-108 Identity = 186/213 (87.32%), Postives = 203/213 (95.31%), Query Frame = 3 Query: 42 SPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAIYDICRRQLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDITEFQTNLVPYPRIHFMLSSYAPIISAEKAYHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCMMYRGDVVPKDVNASIATIKTKRTIQFVDWCPTGFKAGINYQPPTVVPGGDLAKVMRAVCMISNSTAIAE 680 SPQVST+VVEPYNSVLSTHSLLEHTDV+++LDNEAIYDICRR LDIERP Y+NLNRL++QVISSLTASLRFDGALNVD+ EFQTNLVPYPRIHFMLSSYAP+IS+ KA+HEQLSVAEIT+SAFEPASMM KCDPRHGKYMACC+MYRGDVVPKDVNA++ATIKTKRTIQFVDWCPTGFK GINYQ PTVVPG DLAKV RAVCMISNST++ E Sbjct: 174 SPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLDIERPNYSNLNRLVSQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISSAKAFHEQLSVAEITSSAFEPASMMVKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQAPTVVPGADLAKVQRAVCMISNSTSVVE 386
BLAST of CX301945 vs. ExPASy Swiss-Prot
Match: TBA3_RAT (Tubulin alpha-3 chain OS=Rattus norvegicus GN=Tuba3a PE=2 SV=1) HSP 1 Score: 390.578 bits (1002), Expect = 4.102e-108 Identity = 183/213 (85.92%), Postives = 202/213 (94.84%), Query Frame = 3 Query: 42 SPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAIYDICRRQLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDITEFQTNLVPYPRIHFMLSSYAPIISAEKAYHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCMMYRGDVVPKDVNASIATIKTKRTIQFVDWCPTGFKAGINYQPPTVVPGGDLAKVMRAVCMISNSTAIAE 680 +PQVSTAVVEPYNS+L+TH+ LEH+D A M+DNEAIYDICRR LDIERPTYTNLNRLI Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAP+ISAEKAYHEQLSVAEITN+ FEPA+ M KCDPRHGKYMACCM+YRGDVVPKDVNA+IATIKTKRTIQFVDWCPTGFK GINYQPPTVVPGGDLAKV RAVCM+SN+TAIAE Sbjct: 174 APQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAE 386 The following BLAST results are available for this feature:
BLAST of CX301945 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 419
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX301945 ID=CX301945; Name=CX301945; organism=Citrus sinensis; type=EST; length=682bpback to top |