EY659848

Overview
NameEY659848
Unique NameEY659848
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length662
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9752 contig Csv1_Contig9752:461..1122. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY659848 vs. ExPASy Swiss-Prot
Match: METE_ACIF2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=metE PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.414e-25
Identity = 60/110 (54.55%), Postives = 75/110 (68.18%), Query Frame = 1 
Query:   31 SK*NDIIHSIIDMDADVISIPNSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 360
            S+ NDI+ +I  MDADVI+I  SRS  +LL  F     Y   IGPGVYDIHSPR+PS EE+   + K + V+    LW+NPDCGLKTRK+ EV PAL NMV AA+ +R +
Sbjct:  674 SEFNDILPAIAAMDADVITIETSRSQMELLDAFAT-FNYPNEIGPGVYDIHSPRVPSVEEMVGLMEKAVKVVPAERLWINPDCGLKTRKWAEVTPALENMVEAARQVRAR 782
[Close]
BLAST of EY659848 vs. ExPASy Swiss-Prot
Match: METE_THIDA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=metE PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.412e-25
Identity = 61/108 (56.48%), Postives = 74/108 (68.52%), Query Frame = 1 
Query:   31 SK*NDIIHSIIDMDADVISIPNSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 354
            S+ NDII +I  MDADVI+I  SRSD +LL  F +   Y   IGPGVYDIHSP IP+ + I + I K    +    LW+NPDCGLKTR++ EV PAL NMVAAA+ LR
Sbjct:  656 SEFNDIIEAIAAMDADVITIETSRSDMELLDAF-DHFSYPNEIGPGVYDIHSPNIPTPQHIVNLIKKAAERIPAERLWINPDCGLKTRQWNEVIPALGNMVAAARTLR 762
[Close]
BLAST of EY659848 vs. ExPASy Swiss-Prot
Match: METE_BURP8 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=metE PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.412e-25
Identity = 62/108 (57.41%), Postives = 72/108 (66.67%), Query Frame = 1 
Query:   31 SK*NDIIHSIIDMDADVISIPNSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 354
            S+ NDII SI +MDADVI+I  SRSD +LL  F +   Y   IGPGVYDIHSP IP    + D + K    +    LWVNPDCGLKTR + EV PAL NMVAAA+ LR
Sbjct:  654 SEFNDIIASIAEMDADVITIETSRSDMELLDAF-DDFHYPNQIGPGVYDIHSPNIPDQAHVVDLMKKAAERIPAERLWVNPDCGLKTRAWEEVIPALKNMVAAARTLR 760
[Close]
BLAST of EY659848 vs. ExPASy Swiss-Prot
Match: METE_STAES (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=metE PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.150e-25
Identity = 62/113 (54.87%), Postives = 76/113 (67.26%), Query Frame = 1 
Query:   31 SK*NDIIHSIIDMDADVISIPNSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLAS 369
            S+   IIH+I D+DADVISI  SRS   L+  F E + Y  GIG GVYDIHSPRIP+ EEI   IN+ L  ++ ++ WVNPDCGLKTRK  EVK AL+ +V A K  R +  S
Sbjct:  634 SQFGQIIHAIHDLDADVISIETSRSHGDLIQDF-EDINYDLGIGLGVYDIHSPRIPTEEEITTAINRSLQQIDRSLFWVNPDCGLKTRKENEVKDALTVLVNAVKKKRQESES 745
[Close]
BLAST of EY659848 vs. ExPASy Swiss-Prot
Match: METE_STAEQ (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=metE PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.150e-25
Identity = 62/113 (54.87%), Postives = 76/113 (67.26%), Query Frame = 1 
Query:   31 SK*NDIIHSIIDMDADVISIPNSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLAS 369
            S+   IIH+I D+DADVISI  SRS   L+  F E + Y  GIG GVYDIHSPRIP+ EEI   IN+ L  ++ ++ WVNPDCGLKTRK  EVK AL+ +V A K  R +  S
Sbjct:  634 SQFGQIIHAIHDLDADVISIETSRSHGDLIQDF-EDINYDLGIGLGVYDIHSPRIPTEEEITTAINRSLQQIDRSLFWVNPDCGLKTRKENEVKDALTVLVNAVKKKRQESES 745
[Close]
BLAST of EY659848 vs. ExPASy Swiss-Prot
Match: METE_PSEA7 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas aeruginosa (strain PA7) GN=metE PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.150e-25
Identity = 60/108 (55.56%), Postives = 75/108 (69.44%), Query Frame = 1 
Query:   31 SK*NDIIHSIIDMDADVISIPNSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 354
            S+ ND+I SI  MDADVI+I  SRSD +LL  F E   Y   IGPGVYDIHSPR+P+ E++   ++K    +    LWVNPDCGLKTR + E + AL+NMVAAA+ LR
Sbjct:  652 SEFNDVIESIAAMDADVITIETSRSDMELLEAF-EAFAYPNEIGPGVYDIHSPRVPAVEDMVKLLSKAAERIPAARLWVNPDCGLKTRAWAETEAALANMVAAARQLR 758
[Close]
BLAST of EY659848 vs. ExPASy Swiss-Prot
Match: METE_MESSB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mesorhizobium sp. (strain BNC1) GN=metE PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.150e-25
Identity = 60/105 (57.14%), Postives = 75/105 (71.43%), Query Frame = 1 
Query:   40 NDIIHSIIDMDADVISIPNSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 354
            NDII +I  MDADVISI  SRS  +LL  FR   +Y   IGPGV+DIHSPR+P  +E+AD + K    L+   +WVNPDCGLKTRK+ EV+ AL+NMV AA+ +R
Sbjct:  664 NDIIDAIAAMDADVISIETSRSKMELLRAFR-AFRYPNDIGPGVFDIHSPRVPPADEMADLLRKAEDGLDPRQIWVNPDCGLKTRKWEEVRFALANMVEAARQMR 767
[Close]
BLAST of EY659848 vs. ExPASy Swiss-Prot
Match: METE_STAAW (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus aureus (strain MW2) GN=metE PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.113e-25
Identity = 61/110 (55.45%), Postives = 75/110 (68.18%), Query Frame = 1 
Query:   31 SK*NDIIHSIIDMDADVISIPNSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 360
            S+   IIH+I D+DADVISI  SRS   L+  F E + Y  GIG GVYDIHSPRIP+ EEI   IN+ L  ++ ++ WVNPDCGLKTRK  EVK AL+ +V A K  R +
Sbjct:  634 SQFGQIIHAIHDLDADVISIETSRSHGDLIKDF-EDINYDLGIGLGVYDIHSPRIPTKEEITTAINRSLQQIDRSLFWVNPDCGLKTRKEEEVKDALTVLVNAVKAKRQE 742
[Close]
BLAST of EY659848 vs. ExPASy Swiss-Prot
Match: METE_STAAT (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=metE PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.113e-25
Identity = 61/110 (55.45%), Postives = 75/110 (68.18%), Query Frame = 1 
Query:   31 SK*NDIIHSIIDMDADVISIPNSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 360
            S+   IIH+I D+DADVISI  SRS   L+  F E + Y  GIG GVYDIHSPRIP+ EEI   IN+ L  ++ ++ WVNPDCGLKTRK  EVK AL+ +V A K  R +
Sbjct:  634 SQFGQIIHAIHDLDADVISIETSRSHGDLIKDF-EDINYDLGIGLGVYDIHSPRIPTKEEITTAINRSLQQIDRSLFWVNPDCGLKTRKEEEVKDALTVLVNAVKAKRQE 742
[Close]
BLAST of EY659848 vs. ExPASy Swiss-Prot
Match: METE_STAAS (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus aureus (strain MSSA476) GN=metE PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.113e-25
Identity = 61/110 (55.45%), Postives = 75/110 (68.18%), Query Frame = 1 
Query:   31 SK*NDIIHSIIDMDADVISIPNSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 360
            S+   IIH+I D+DADVISI  SRS   L+  F E + Y  GIG GVYDIHSPRIP+ EEI   IN+ L  ++ ++ WVNPDCGLKTRK  EVK AL+ +V A K  R +
Sbjct:  634 SQFGQIIHAIHDLDADVISIETSRSHGDLIKDF-EDINYDLGIGLGVYDIHSPRIPTKEEITTAINRSLQQIDRSLFWVNPDCGLKTRKEEEVKDALTVLVNAVKAKRQE 742
The following BLAST results are available for this feature:
BLAST of EY659848 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 269
Match NameE-valueIdentityDescription
METE_ACIF21.414e-2554.555-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_THIDA2.412e-2556.485-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURP82.412e-2557.415-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAES3.150e-2554.875-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAEQ3.150e-2554.875-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEA73.150e-2555.565-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MESSB3.150e-2557.145-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAAW4.113e-2555.455-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAAT4.113e-2555.455-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAAS4.113e-2555.455-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-015-G05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659848 ID=EY659848; Name=EY659848; organism=Citrus sinensis; type=EST; length=662bp
TTTCAAAAACGCGCGTCCGCACATGTGCTTTCTAAATAAAACGACATTAT
CCACTCAATTATCGACATGGATGCTGATGTGATCTCCATCCCGAACTCTC
GTTCTGATGAGAAGCTCCTGTCTGTCTTCCGTGAGGGAGTCAAGTATGGT
GCTGGAATTGGCCCTGGTGTGTATGACATCCACTCTCCAAGAATACCATC
AACTGAAGAAATTGCTGACAGAATCAACAAGATGCTTGCTGTGCTAGAAA
CCAACATTTTGTGGGTTAACCCTGACTGTGGTCTTAAGACTCGCAAGTAC
ACTGAGGTGAAGCCAGCCCTCTCAAACATGGTCGCTGCTGCCAAGCTACT
CCGCACCCAGCTTGCCAGTGCCAAGTGAGTGGTTCTGGAGATTGGAGGGA
TACTTCCTGAGCCATTGATTTTTTTTTTTTTCACTTTAAACAAAGAAAGA
AAATTCCTGTCTTATTACCTATTCGAATAACTGTGGGTCGTGATGTGATG
AAAATTTTCCGTATGCATATTATGCACTATTGAGCAATTGGCTTCTATTT
TTCTTTGCTTGTATTTTCCGTTTTTAAAGGCCCCGGCTTGCTATCAGTGG
CCGTAAATCGATGGAATACCTTTACTGGTTTGTGCAAAAAAAAAAAAAAA
AAAAAAAAAAAA
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