CX301810
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX301810 vs. ExPASy Swiss-Prot
Match: SYFB_THESM (Phenylalanyl-tRNA synthetase beta chain OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=pheT PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.585e-17 Identity = 60/227 (26.43%), Postives = 99/227 (43.61%), Query Frame = 1 Query: 16 DIMEDVAIAYGYNNLEITPPKTLTYGGQQPLNMLSDLLRYELAFSGYTEVLSFALCSHKENFEYLQRPDNGSAVVIANPKTTEFEVARTTLLVGLLKTLSCSKNLPLPIKVFEVSDVVLNKKDSEVGAINERRLAAIYTNVTSGFEHIHGLLDQIMLKLAVDQNRYYLDSRGCTDPTFFPGMRANXXXXXXXXXXXXAFHPAVIQNFELNYPCSAVELNIEPFL*GS 696 D++EDV IAYGYNN+E P+ G + +R + G EV++F L + + F+ + P+ V I NP + ++ R LL L++ LS + + P ++FEV L + E I+E +L + F +LD ++ L + R +F PG HP V++N+ + P +A E+ + PF GS Sbjct: 338 DVLEDVLIAYGYNNIEPEEPELAVQGKGDDFVDFENAIRDLMVGFGLQEVMTFNLTNREAQFDKMNIPEE-DIVEIENPISQKWSALRRWLLPSLMEFLSQNTHEEYPQRIFEVGKATLIDESRETKTISESKLVVAIAHPKVTFTEAKEILDSVLRHLGAEYT-----IREIEYGSFIPGRAGEIIVEGKKVGIIGEIHPQVLENWGVEMPVAAFEIFLRPFYKGS 558
BLAST of CX301810 vs. ExPASy Swiss-Prot
Match: SYFB_METST (Phenylalanyl-tRNA synthetase beta chain OS=Methanosphaera stadtmanae (strain DSM 3091) GN=pheT PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.742e-16 Identity = 56/225 (24.89%), Postives = 98/225 (43.56%), Query Frame = 1 Query: 16 DIMEDVAIAYGYNNLEITPPKTLTYGGQQPLNMLSDLLRYELAFSGYTEVLSFALCSHKENFEYLQRPDNGSAVVIANPKTTEFEVARTTLLVGLLKTLSCSKNLPLPIKVFEVSDVVLNKKDSEVGAINERRLAAIYTNVTSGFEHIHGLLDQIMLKLAVDQNRYYLDSRGCTDPTFFPGMRANXXXXXXXXXXXXAF-------HPAVIQNFELNYPCSAVEL 669 DI+E++A+ YG+N L P T +L + +TE+ S L S +++ L++ V +A P T + + R +L+ LL+ L +K+ LP K+FE+ DV +++E + ++LAA + + F I +++ + + + ++ D F G A F HP V+ NFEL YP A E+ Sbjct: 334 DIIENIALGYGFNELPAQLPDFATVANPDSKRQFDQILEQVMIGLSFTEIKSLMLTSETQHYTKLRKEVEEDRVTVAQPITQDRTMIRKSLINSLLEFLEDNKHEELPQKIFEIGDVAYINENAETKMVTVKKLAAAQISSVANFTTIKSIVESFVANMG-----FEMELEDHDDSAFIKGRCAKFTTKPLNKNTPFTFKGYFGEIHPEVLTNFELEYPVIAFEV 553
BLAST of CX301810 vs. ExPASy Swiss-Prot
Match: SYFB_THEPD (Phenylalanyl-tRNA synthetase beta chain OS=Thermofilum pendens (strain Hrk 5) GN=pheT PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.972e-16 Identity = 62/225 (27.56%), Postives = 99/225 (44.00%), Query Frame = 1 Query: 16 DIMEDVAIAYGYNNLEITPPKTLTYGGQQPLNMLSDLLRYELAFSGYTEVLSFALCSHKENFEYLQRPDNGSAVVIANPKTTEFEVARTTLLVGLLKTLSCSKNLPLPIKVFEVSDVVLNKKDSEVGAINERRLAAIY----TNVTSGFEHIHGLLDQIMLKLAVDQNRYYLDSRGCTDPTFFPGMRANXXXXXXXXXXXXAFHPAVIQNFELNYPCSAVELNIE 678 DI E+VA+ YGY +E L G + P+ + + LR + G+ EV ++ + S F+ + P V + NP+ + RT ++ LL+ +S SK+ P +VFE DV + + + ERRLA +T G + GL Q+ + +++ + P+F G A HP V+ NF L P A ELN+E Sbjct: 329 DIAEEVAMGYGYERIEPAVIPPLHPGREDPIEVFTRALREGMVGLGFVEVNNYMMTSASLMFDAMLLPRQ-PIVEVENPRHEAYHALRTWIVPQLLRLMSSSKHAGYPQRVFEAGDVAIPDESRDNRVREERRLAFAVAGKGVTLTDGLAALKGLFRQLGVSFKLEKAEH---------PSFIAGRVARVVTEAGDAGIVGEVHPQVLVNFGLEVPVVAGELNVE 543
BLAST of CX301810 vs. ExPASy Swiss-Prot
Match: SYFB_METM6 (Phenylalanyl-tRNA synthetase beta chain OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=pheT PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.972e-16 Identity = 59/225 (26.22%), Postives = 97/225 (43.11%), Query Frame = 1 Query: 16 DIMEDVAIAYGYNNLEITPPKTLTYGGQQPLNMLSDLLRYELAFSGYTEVLSFALCSHKENFEYLQ-RPDNGSAVVIANPKTTEFEVARTTLLVGLLKTLSCSKNLPLPIKVFEVSDVVL---NKKDSEVGAINERRLAAIYTNVTSGFEHIHGLLDQIMLKLAVDQNRYYLDSRGCTDPTFFPGMRANXXXXXXXXXXXXAFHPAVIQNFELNYPCSAVELNIE 678 D+ E++AI YGY E P T G + + + + G+ EV++ L + FE + + + + P + E V RT++L LL+TL +K+ LP K+FE+ D V+ N +++ N +++A T+ + F I ++ + D + P F PG A HP VI NFEL +P E+ IE Sbjct: 335 DLKEEIAINYGYEKFEGKLPSVATTGSKDSVEKKCSAMSDLMIGLGFYEVMNLTLSNQDTLFEKMNLEVEEKDYIEVLKPASIEHRVLRTSILPLLLETLYINKHHSLPQKIFEIGDCVIIDENDTETDTKCKNIKKIAGAITHPLTNFNEIKSSTGALLREFFED-----FEFENYEHPAFIPGRCAKIIKDRKEVGFFGEIHPEVILNFELEHPIVGFEITIE 554
BLAST of CX301810 vs. ExPASy Swiss-Prot
Match: SYFB_KORCO (Phenylalanyl-tRNA synthetase beta chain OS=Korarchaeum cryptofilum (strain OPF8) GN=pheT PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.972e-16 Identity = 63/222 (28.38%), Postives = 103/222 (46.40%), Query Frame = 1 Query: 16 DIMEDVAIAYGYNNLEITPPKT-LTYGGQQPLNMLSDLLRYELAFSGYTEVLSFALCSHKENFEYLQRPDNGSAVVIANPKTTEFEVARTTLLVGLLKTLSCSKNLPLPIKVFEVSDVVLNKKDSEVGAINERRLAAIYTNVTSGFEHIHGLLDQIMLKLAVDQNRYYLDSRGCTDPTFFPGMRANXXXXXXXXXXXXAFHPAVIQNFELNYPCSAVELNIE 678 D+ E+V+I G N + PK +T G P+ +S +R + GY EVL++ + S F + R + V I+NP + + V R L GLL L+ + ++ P KVFE+ DVVL + E +ERR+AA Y + + GFE I+ LK+ + Y ++ + F G A+ P V+ N + P + E+ ++ Sbjct: 333 DVAEEVSITLGLNKIGYELPKNVMTVGRPHPVEKVSRKVRTVMIGLGYQEVLNYIMTSRASLFHAVGREER-EVVEISNPVSESYSVLRDALFPGLLAFLANNTHVRYPQKVFEIGDVVLIDERLENKTRDERRVAAAYADDSVGFEDIYS-----HLKVLFENLSYRIELEPRKERPFIEGRCASVLREGEEVGVIGEIDPEVLLNLGITVPVAIFEVALK 548
BLAST of CX301810 vs. ExPASy Swiss-Prot
Match: SYFB_SULSO (Phenylalanyl-tRNA synthetase beta chain OS=Sulfolobus solfataricus GN=pheT PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.070e-16 Identity = 59/220 (26.82%), Postives = 101/220 (45.91%), Query Frame = 1 Query: 16 DIMEDVAIAYGYNNLEITPPKTLTYGGQQPLNMLSDLLRYELAFSGYTEVLSFALCSHKENFEYLQRPDNGSAVVIANPKTTEFEVARTTLLVGLLKTLSCSKNLPLPIKVFEVSDVVLNKKDSEVGAINERRLAAIYTNVTSGFEHIHGLLDQIMLKLAVDQNRYYLDSRGCTDPTFFPGMRANXXXXXXXXXXXXAFHPAVIQNFELNYPCSAVELNI 675 DI+ED+A++ GYNNLE + + YG L +L +R +G+ EV +F L +++ + V I NP + E+ R +L+ LL LS +++ PI++FE DVV+ ++ G N++R A + +E + + I+ L ++ N Y + + F G A+ +P V+ F + YP EL I Sbjct: 327 DIVEDIAMSIGYNNLEPSKYISTNYGSYDYLTLLERKMRELSIGAGFVEVFNFVLIKNEKILD-------SKYVKILNPISEEYNAVRNSLIPILLDFLSKNQHAKFPIRIFETGDVVIYDSSTDTGFRNDKRAAYAIMDNKVSYEDVQAPIHYILKTLGIEVN--YKEE---NNDIFIEGRSASIVYENEKIGVIGEINPDVLIRFGIEYPTVIAELYI 534
BLAST of CX301810 vs. ExPASy Swiss-Prot
Match: SYFB_UNCMA (Phenylalanyl-tRNA synthetase beta chain OS=Uncultured methanogenic archaeon RC-I GN=pheT PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.648e-16 Identity = 57/221 (25.79%), Postives = 95/221 (42.99%), Query Frame = 1 Query: 16 DIMEDVAIAYGYNNLEITPPKTLTYGGQQPLNMLSDLLRYELAFSGYTEVLSFALCSHKENFEYLQRPDNGSAVVIANPKTTEFEVARTTLLVGLLKTLSCSKNLPLPIKVFEVSDVVLNKKDSEVGAINERRLAAIYTNVTSGFEHIHGLLDQIMLKLA-VDQNRYYLDSRGCTDPTFFPGMRANXXXXXXXXXXXXAFHPAVIQNFELNYPCSAVELNI 675 D+++DV A+GYNN+ + P T + G L D +R + G + +F L E F + PD+G+AV I+NP ++ + RT+L+ L+ LS + + P +FEV V G +A +GF I L + +D+ L + P+F PG A P V++++ + P +A E+ I Sbjct: 333 DVVDDVGRAFGYNNITPSYPNTPSVGKLTEATKLGDAIRNTMIGLGCQDTFNFILIGKDEVFGKMNLPDDGTAVEISNPYAEQYNIVRTSLIPSLMIVLSNNLHRDYPQNIFEVGTVAHLDSAENTGVKEIDHVACTLCYAKAGFNEIKVKLQSLCANFGKLDE----LKTVAAEHPSFIPGRCAEVRIGDKKVGIIGELSPVVLKSWGIEMPVAAFEMEI 549
BLAST of CX301810 vs. ExPASy Swiss-Prot
Match: SYFB_PYRKO (Phenylalanyl-tRNA synthetase beta chain OS=Pyrococcus kodakaraensis GN=pheT PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.648e-16 Identity = 62/236 (26.27%), Postives = 98/236 (41.53%), Query Frame = 1 Query: 16 DIMEDVAIAYGYNNLEITPPKTLTYGGQQPLNMLSDLLRYELAFSGYTEVLSFALCSHKENFEYLQRP--------------DNGSAVVIANPKTTEFEVARTTLLVGLLKTLSCSKNLPLPIKVFEVSDVVLNKKDSEVGAINERRLAAIYTNVTSGFEHIHGLLDQIMLKLAVDQNRYYLDSRGCTDPTFFPGMRANXXXXXXXXXXXXAFHPAVIQNFELNYPCSAVELNIEP 681 D++EDV IAYGYN +E PK G D +R + G EV++F L + + ++ + P V I NP + ++ R L+ LL LS + + P K+FEV L + E ++E +LA + F +L+ +M L + Y L+ P+F PG HPAV++N+ + P +A EL + P Sbjct: 337 DVLEDVLIAYGYNEIEPEEPKLAVQGRGDKFIEFEDAVRELMVGFGLQEVMTFNLTNREAQYDRMNLPCGEHQEECRDYFNHPPAELVEIENPISPKWSALRNWLIPSLLDFLSQNTHEEYPQKLFEVGKATLIDESRETKTVSESKLAVALAHPRVTFTEAKEILEGVMRHLGFE---YELEE--AEHPSFIPGRVGKIIVNGETIGVIGEIHPAVLENWGIEMPVAAFELFLAP 567
BLAST of CX301810 vs. ExPASy Swiss-Prot
Match: SYFB_THEGJ (Phenylalanyl-tRNA synthetase beta chain OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=pheT PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.475e-15 Identity = 61/231 (26.41%), Postives = 96/231 (41.56%), Query Frame = 1 Query: 16 DIMEDVAIAYGYNNLEITPPKTLTYGGQQPLNMLSDLLRYELAFSGYTEVLSFALCSHKENF---------EYLQRPDNGSAVVIANPKTTEFEVARTTLLVGLLKTLSCSKNLPLPIKVFEVSDVVLNKKDSEVGAINERRLAAIYTNVTSGFEHIHGLLDQIMLKLAVDQNRYYLDSRGCTDPTFFPGMRANXXXXXXXXXXXXAFHPAVIQNFELNYPCSAVELNIEP 681 D++EDV IAYGYN +E PK G D +R + G EV++F L + + + +Y P V I NP + ++ R LL LL LS + + P ++FEV L + E ++E +LA + F +LD +M L + Y L+ P+F PG HP+V++ + + P + EL + P Sbjct: 337 DVLEDVLIAYGYNEIEPEEPKLAVQGRGDKFIEFEDAVRELMVGFGLQEVMTFNLTNREAQYGKMNLEYGRDYFNNPP-AELVEIENPISPKWSALRNWLLPSLLDFLSQNTHEEYPQRLFEVGKATLIDESRETKTVSESKLAVVLAQPRVTFTDTKEILDSVMRHLGFE---YELEE--VEHPSFIPGRVGKVIVKGKAIGVIGEIHPSVLEKWGIEMPVAGFELFLRP 561
BLAST of CX301810 vs. ExPASy Swiss-Prot
Match: SYFB_BORBZ (Phenylalanyl-tRNA synthetase beta chain OS=Borrelia burgdorferi (strain ZS7) GN=pheT PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.516e-15 Identity = 58/230 (25.22%), Postives = 99/230 (43.04%), Query Frame = 1 Query: 16 DIMEDVAIAYGYNNLEITPPKTLTYGGQQPLNMLSDLLRYELAFSGYTEVLSFALCSHKENFEYLQRPDNGSAVVIANPKTTEFEVARTTLLVGLLKTLSCSKNLPLPIKVFEVSDVVLNKKDSEVGAINERRLAAIYTNVTSGFEHIHGLLDQIMLKLAVDQN------RYYLDSRGCTDPTFFPGMRANXXXXXXXXXXXXAFHPAVIQNFELNYPCSAVELNIEPFL 687 D++EDV I G ++ PK G PL S +R + G+ E++ + S K+ + + D + + ++NP T +E R +++ LLK+ S S N P P K+FE+ V L D+ G LA + + F I+ ++ + L ++ N +Y++ RG A+ P V+ NF + PCS E+NI + Sbjct: 346 DVIEDVMIGEGLSSFNPELPKAFAVGRLSPLEEFSRNVRNLMVGMGFQEMIYNYMGSKKDFIDRMNINDQ-NFLKVSNPMTENYEYIRASIIPNLLKSESVSSNFPYPHKIFEIGKVALRNLDTTEGTSTFTNLAFLMSGKEISFNEINSIVATLFYYLNIEINLIESKTTFYINGRG-----------ADIVIEGFNIGGFGEISPYVLNNFGIFIPCSVFEVNINKLM 563 The following BLAST results are available for this feature:
BLAST of CX301810 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
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Sequences
The
following sequences are available for this feature:
EST sequence >CX301810 ID=CX301810; Name=CX301810; organism=Citrus sinensis; type=EST; length=697bpback to top |