CX301806

Overview
NameCX301806
Unique NameCX301806
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length711
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX301806 vs. ExPASy Swiss-Prot
Match: CAT1_PENJA (Catalase OS=Penicillium janthinellum PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.397e-15
Identity = 50/143 (34.97%), Postives = 79/143 (55.24%), Query Frame = 2 
Query:   11 EEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVN-APKCPHRNNHYDG 436
            EEA +       +  ++L++SI      + +L IQ++  +++ +  F+  +VTK     ++PL   G+LV NKNI   F E     F PG +V G+ ++ D +LQ R+F+Y DTQ +R GPN   L  N  P+ P  NN+ DG
Sbjct:  243 EEAWRFPEEGEGYVAENLFESIELLTVGDEELEIQSMSFNNDLRERFNSSEVTKSSVVRLVPLITQGKLVFNKNIQMLFNEVIGAMFQPGHIVRGVDFTEDPLLQGRLFSYLDTQLNRHGPNIQQLGFNRPPRAPIHNNNRDG 385
The following BLAST results are available for this feature:
BLAST of CX301806 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CAT1_PENJA3.397e-1534.97Catalase OS=Penicillium janthinellum PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC08013G09SK PhyRootSw1 Citrus sinensis cDNA clone C08013G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX301806 ID=CX301806; Name=CX301806; organism=Citrus sinensis; type=EST; length=711bp
AATTCGGCACGAGGAAGCAGTAAAGGTTGGTGGATCTAATCACAGCCACG
CTACTCAGGATCTCTACGACTCAATTGCAGCTGGAAACTATCCTGAGTGG
AAACTCTACATTCAGACTATTGATCCCGATCACGAGGACCAATTTGACTT
TGACCCACTGGACGTAACCAAGTGGTGGCCTGAGGACATCATCCCTCTGC
AGCCAGTTGGACGCTTGGTCTTGAACAAGAACATCGATAATTTCTTTGCG
GAAAATGAAATGCTTGCATTTAACCCTGGTATCGTGGTTCCTGGGATCTA
CTACTCAAATGATAAGATGCTCCAATGTCGAATCTTTGCCTATGGTGATA
CCCAGAGGCATCGCCTTGGACCCAACTACTTGATGCTTCCAGTTAATGCA
CCCAAATGTCCTCATCGCAACAATCATTATGATGGTTTCATGAATTTCAT
GCACAGGGATGAGGAGGTCGATTACTTTCCTTCGAGGTATGATCCTACTC
GTCATGCTGAGAGATATCCCATTCCTTCTGATGTAATTACAGGAAGGCGT
GAGAAGGCTTGCATTGAGAAGGAAAACAACTTCAAGCAGCCTGGAGAGAG
ATACCGATCCTGGGCCCCAGACAGGCAAGAGAGGTTCCTTAATCGATGGA
TTAAGGCTTTATGTGACCCACGTGTCACCCATGAGGTTCGCAGCATATGG
GTCTCTTACTG
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