CX301806

Overview
NameCX301806
Unique NameCX301806
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length711
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX301806 vs. ExPASy Swiss-Prot
Match: CATA_PSEAE (Catalase OS=Pseudomonas aeruginosa GN=katA PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.123e-34
Identity = 76/214 (35.51%), Postives = 121/214 (56.54%), Query Frame = 2
Query:    2 IRHEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNF--MHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENN-FKQPGERYRSWAPDRQER 634
            + + EA +V   +   + +DLY+SI  G++P WK+Y+Q +       + ++P D+TK WP    PL  VG   LN+N DN+FAE E  AF P  VVPGI +S DKMLQ R+F+YGD  R+RLG N+  +PVNA +CPH+  H DG M     +  + V Y P+ ++  +    +  P   + G  +      +++ + QP   +  +  ++++R
Sbjct:  225 LTNAEAAEVIAQDRESSQRDLYESIEKGDFPRWKMYVQIMPEKEAATYRYNPFDLTKVWPHGDYPLIEVGFFELNRNPDNYFAEVEQAAFTPANVVPGIGFSPDKMLQGRLFSYGDAHRYRLGVNHHQIPVNAARCPHQVYHRDGGMRVDGNNAHQRVTYEPNSFNQWQEQPDFSEPPLSLEGAADHWNHRVDDDYYSQPAALFHLFTDEQKQR 438          
BLAST of CX301806 vs. ExPASy Swiss-Prot
Match: CATB_DICDI (Catalase-B OS=Dictyostelium discoideum GN=catB PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.467e-34
Identity = 72/162 (44.44%), Postives = 103/162 (63.58%), Query Frame = 2
Query:   11 EEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRL-GPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYD 493
            +EA K+ G +  +  +  ++ I +G++P+W+L  Q +D D + +FDFD LD TK  PE++ P+ P+GR+V+++N DNFFAE E +AF    VVPGI +SND +LQ RIF+Y DTQ  RL GPN+  +P+N P CP  NN  DG            YFP+  D
Sbjct:  246 DEAQKIAGKDCDYHRRRFWEDIESGDFPQWELGAQLLDEDLQKKFDFDILDPTKLIPEELTPVIPLGRMVIDRNPDNFFAETEQVAFCVSHVVPGIDFSNDPLLQGRIFSYLDTQLSRLGGPNFNEIPINRPVCPFANNQRDGIHRMTINKGGASYFPNSID 407          
BLAST of CX301806 vs. ExPASy Swiss-Prot
Match: CATA_MOUSE (Catalase OS=Mus musculus GN=Cat PE=1 SV=3)

HSP 1 Score: 146.362 bits (368), Expect = 1.467e-34
Identity = 79/165 (47.88%), Postives = 105/165 (63.64%), Query Frame = 2
Query:   14 EAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHR----NNHYDGFMNFMHRDE--EVDYFPSRY 490
            EA ++   +  +  +DL+++IA GNYP W  YIQ +     + F F+P D+TK WP    PL PVG+LVLNKN  N+FAE E +AF+P  + PGI  S DKMLQ R+FAY DT RHRLGPNYL +PVN   CP+R    N   DG M  MH ++    +Y+P+ +
Sbjct:  249 EAGRLAQEDPDYGLRDLFNAIANGNYPSWTFYIQVMTFKEAETFPFNPFDLTKVWPHKDYPLIPVGKLVLNKNPVNYFAEVEQMAFDPSNMPPGIEPSPDKMLQGRLFAYPDTHRHRLGPNYLQIPVN---CPYRARVANYQRDGPM-CMHDNQGGAPNYYPNSF 409          
BLAST of CX301806 vs. ExPASy Swiss-Prot
Match: CATE_MYCAV (Catalase HPII OS=Mycobacterium avium GN=katE PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.915e-34
Identity = 73/157 (46.50%), Postives = 100/157 (63.69%), Query Frame = 2
Query:   11 EEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRL-GPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYF 478
            +E  K+ G +  +  +DL+++I +G YPEW+L +Q +  D E  FDFD LD TK  PE+ +P+ PVG++VLN+N DNFFAE E +AF+   VVPGI ++ND +LQ R F+Y DTQ  RL GPN+  LPVN P    R N +DG+           YF
Sbjct:  255 DECQKIAGKDPDYNRRDLWEAIESGQYPEWELGVQLVAEDDEFSFDFDLLDATKIIPEEQVPVLPVGKMVLNRNPDNFFAETEQVAFHTANVVPGIDFTNDPLLQFRNFSYLDTQLIRLGGPNFAQLPVNRPVAQVRTNQHDGYAQHAIPQGRSSYF 411          
BLAST of CX301806 vs. ExPASy Swiss-Prot
Match: CATA_EMENI (Catalase A OS=Emericella nidulans GN=catA PE=2 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 2.502e-34
Identity = 77/203 (37.93%), Postives = 116/203 (57.14%), Query Frame = 2
Query:   11 EEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHA-----ERYPIPSDVITGRREKACIEKENNFKQPGERY 604
            +EA+K+ G +     +DL ++I    YP+W   IQ I  + +D+F+FD  D TK WPE+ +PL+ VG L LN+NID FF E E +AF    +VPGI +S+D +LQ R F+Y DTQ  RLG N+  +P+N P CP  N++ DG          V+Y+P+R++    A     + +P P   ITGR+ +    K   +    + +
Sbjct:  270 DEALKLAGQDPDFHRKDLMEAIDNKAYPKWDFAIQAIPEEDQDKFEFDIFDATKVWPEEQVPLRVVGELELNRNIDEFFPETEQVAFCTSHIVPGIDFSDDPLLQGRNFSYQDTQISRLGVNWEEIPINRPVCPFLNHNRDGAKRHRITKGTVNYWPNRFEANPPASDKGFKSHPAP---ITGRKRRDLTPKFKEYHNQAQLF 469          
BLAST of CX301806 vs. ExPASy Swiss-Prot
Match: CATA_BORPE (Catalase OS=Bordetella pertussis GN=katA PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.267e-34
Identity = 79/210 (37.62%), Postives = 117/210 (55.71%), Query Frame = 2
Query:   14 EAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNF-MHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEK--ENNFKQPGERYRSWAPDRQER 634
            EA ++ G +   A +DL+ +I  G +P W L +Q +       +  +P D+TK WP    PL  VG L LNKN +N+FAE E  AF P  VVPGI +S DKMLQ R+F+YGDT R+RLG N+  +PVNAP+CP  + H DG      +    ++Y P+ +   R A+    P   + G+       +  E+ + QPG  +R    D++++
Sbjct:  231 EAAELVGRDRESAQRDLFQNIEQGQFPRWTLKVQVMPEAEAATYHINPFDLTKVWPHADYPLIEVGVLELNKNPENYFAEVEQAAFTPANVVPGIGFSPDKMLQGRLFSYGDTHRYRLGINHHQIPVNAPRCPFHSFHRDGMGRVDGNGGATLNYEPNSFGEWREAKHAAEPPLALDGQAADRWNHRVDEDYYSQPGALFRLMNDDQKQQ 440          
BLAST of CX301806 vs. ExPASy Swiss-Prot
Match: CATA_BORPA (Catalase OS=Bordetella parapertussis GN=katA PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.267e-34
Identity = 79/210 (37.62%), Postives = 117/210 (55.71%), Query Frame = 2
Query:   14 EAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNF-MHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEK--ENNFKQPGERYRSWAPDRQER 634
            EA ++ G +   A +DL+ +I  G +P W L +Q +       +  +P D+TK WP    PL  VG L LNKN +N+FAE E  AF P  VVPGI +S DKMLQ R+F+YGDT R+RLG N+  +PVNAP+CP  + H DG      +    ++Y P+ +   R A+    P   + G+       +  E+ + QPG  +R    D++++
Sbjct:  231 EAAELVGRDRESAQRDLFQNIEQGQFPRWTLKVQVMPEAEAATYHINPFDLTKVWPHADYPLIEVGVLELNKNPENYFAEVEQAAFTPANVVPGIGFSPDKMLQGRLFSYGDTHRYRLGINHHQIPVNAPRCPFHSFHRDGMGRVDGNGGATLNYEPNSFGEWREAKHAAEPPLALDGQAADRWNHRVDEDYYSQPGALFRLMNDDQKQQ 440          
BLAST of CX301806 vs. ExPASy Swiss-Prot
Match: CATA_BORBR (Catalase OS=Bordetella bronchiseptica GN=katA PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.267e-34
Identity = 79/210 (37.62%), Postives = 117/210 (55.71%), Query Frame = 2
Query:   14 EAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNF-MHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEK--ENNFKQPGERYRSWAPDRQER 634
            EA ++ G +   A +DL+ +I  G +P W L +Q +       +  +P D+TK WP    PL  VG L LNKN +N+FAE E  AF P  VVPGI +S DKMLQ R+F+YGDT R+RLG N+  +PVNAP+CP  + H DG      +    ++Y P+ +   R A+    P   + G+       +  E+ + QPG  +R    D++++
Sbjct:  231 EAAELVGRDRESAQRDLFQNIEQGQFPRWTLKVQVMPEAEAATYHINPFDLTKVWPHADYPLIEVGVLELNKNPENYFAEVEQAAFTPANVVPGIGFSPDKMLQGRLFSYGDTHRYRLGINHHQIPVNAPRCPFHSFHRDGMGRVDGNGGATLNYEPNSFGEWREAKHAAEPPLALDGQAADRWNHRVDEDYYSQPGALFRLMNDDQKQQ 440          
BLAST of CX301806 vs. ExPASy Swiss-Prot
Match: CATB_AJECA (Catalase B OS=Ajellomyces capsulata GN=CATB PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.267e-34
Identity = 68/143 (47.55%), Postives = 98/143 (68.53%), Query Frame = 2
Query:   11 EEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRL-GPNYLMLPVNAPKCPHRNNHYDG 436
            EEA  +GG N     QDL+D+I +G YPEW+L  Q ++   + +FDFD LD TK  PE+++P  P+G++VLN+N  N+FAE E + F PG VV GI +++D +LQ R+++Y DTQ +R  GPN+  LP+N P+ P  NN+ DG
Sbjct:  284 EEAQALGGKNPDFHRQDLWDAIESGRYPEWELGFQLVNEADQSKFDFDLLDPTKIIPEELVPFTPIGKMVLNRNPKNYFAETEQIMFQPGHVVRGIDFTDDPLLQGRLYSYLDTQLNRHGGPNFEQLPINRPRIPFHNNNRDG 426          
BLAST of CX301806 vs. ExPASy Swiss-Prot
Match: CATA_HUMAN (Catalase OS=Homo sapiens GN=CAT PE=1 SV=3)

HSP 1 Score: 144.821 bits (364), Expect = 4.267e-34
Identity = 75/165 (45.45%), Postives = 104/165 (63.03%), Query Frame = 2
Query:   11 EEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHR----NNHYDGFMNFM-HRDEEVDYFPSRY 490
            E+A ++   +  +  +DL+++IA G YP W  YIQ +  +  + F F+P D+TK WP    PL PVG+LVLN+N  N+FAE E +AF+P  + PGI  S DKMLQ R+FAY DT RHRLGPNYL +PVN   CP+R    N   DG M    ++    +Y+P+ +
Sbjct:  248 EDAARLSQEDPDYGIRDLFNAIATGKYPSWTFYIQVMTFNQAETFPFNPFDLTKVWPHKDYPLIPVGKLVLNRNPVNYFAEVEQIAFDPSNMPPGIEASPDKMLQGRLFAYPDTHRHRLGPNYLHIPVN---CPYRARVANYQRDGPMCMQDNQGGAPNYYPNSF 409          
The following BLAST results are available for this feature:
BLAST of CX301806 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATA_PSEAE1.123e-3435.51Catalase OS=Pseudomonas aeruginosa GN=katA PE=1 SV... [more]
CATB_DICDI1.467e-3444.44Catalase-B OS=Dictyostelium discoideum GN=catB PE=... [more]
CATA_MOUSE1.467e-3447.88Catalase OS=Mus musculus GN=Cat PE=1 SV=3[more]
CATE_MYCAV1.915e-3446.50Catalase HPII OS=Mycobacterium avium GN=katE PE=3 ... [more]
CATA_EMENI2.502e-3437.93Catalase A OS=Emericella nidulans GN=catA PE=2 SV=... [more]
CATA_BORPE3.267e-3437.62Catalase OS=Bordetella pertussis GN=katA PE=1 SV=1[more]
CATA_BORPA3.267e-3437.62Catalase OS=Bordetella parapertussis GN=katA PE=3 ... [more]
CATA_BORBR3.267e-3437.62Catalase OS=Bordetella bronchiseptica GN=katA PE=3... [more]
CATB_AJECA4.267e-3447.55Catalase B OS=Ajellomyces capsulata GN=CATB PE=2 S... [more]
CATA_HUMAN4.267e-3445.45Catalase OS=Homo sapiens GN=CAT PE=1 SV=3[more]

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Properties
Property NameValue
Genbank descriptionC08013G09SK PhyRootSw1 Citrus sinensis cDNA clone C08013G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX301806 ID=CX301806; Name=CX301806; organism=Citrus sinensis; type=EST; length=711bp
AATTCGGCACGAGGAAGCAGTAAAGGTTGGTGGATCTAATCACAGCCACG
CTACTCAGGATCTCTACGACTCAATTGCAGCTGGAAACTATCCTGAGTGG
AAACTCTACATTCAGACTATTGATCCCGATCACGAGGACCAATTTGACTT
TGACCCACTGGACGTAACCAAGTGGTGGCCTGAGGACATCATCCCTCTGC
AGCCAGTTGGACGCTTGGTCTTGAACAAGAACATCGATAATTTCTTTGCG
GAAAATGAAATGCTTGCATTTAACCCTGGTATCGTGGTTCCTGGGATCTA
CTACTCAAATGATAAGATGCTCCAATGTCGAATCTTTGCCTATGGTGATA
CCCAGAGGCATCGCCTTGGACCCAACTACTTGATGCTTCCAGTTAATGCA
CCCAAATGTCCTCATCGCAACAATCATTATGATGGTTTCATGAATTTCAT
GCACAGGGATGAGGAGGTCGATTACTTTCCTTCGAGGTATGATCCTACTC
GTCATGCTGAGAGATATCCCATTCCTTCTGATGTAATTACAGGAAGGCGT
GAGAAGGCTTGCATTGAGAAGGAAAACAACTTCAAGCAGCCTGGAGAGAG
ATACCGATCCTGGGCCCCAGACAGGCAAGAGAGGTTCCTTAATCGATGGA
TTAAGGCTTTATGTGACCCACGTGTCACCCATGAGGTTCGCAGCATATGG
GTCTCTTACTG
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