CX301775

Overview
NameCX301775
Unique NameCX301775
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length686
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX301775 vs. ExPASy Swiss-Prot
Match: PNKD_HUMAN (Probable hydrolase PNKD OS=Homo sapiens GN=PNKD PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.249e-11
Identity = 55/193 (28.50%), Postives = 89/193 (46.11%), Query Frame = 2
Query:  125 VSHRIHKDQIHAVAGRLHLQHYEQEPRLVTWLHTVIEHYFIKNPLIFRQYFEGSSSTYTYLLADAKTREAILIDPVLETVDRDLQ-QIKDLGLELKYTLNTHLHADHITGSGQLKLRSANAKSVISIHSGAQADIH-IDEFDFIEFGSWRVYAVATPGHTDGCISYVLD-----DLSRVFTGDTLLIRGCGRT 682
            + +  ++ Q+     R    H + +PRL   +        +  P++        S  Y+YL+ D + + A+ +DP   +  R +Q  I+  G+ L   L TH H DH  G+  L  R  + +   S   G     H +   D +  G  ++ A+ATPGHT G + Y+LD       S +F+GD L + GCGRT
Sbjct:   88 LGYLFYRQQLRRARNRYPKGHSKTQPRLFNGVKV------LPIPVL--------SDNYSYLIIDTQAQLAVAVDP---SDPRAVQASIEKEGVTLVAILCTHKHWDHSGGNRDLSRRHRDCRVYGSPQDGIPYLTHPLCHQDVVSVGRLQIRALATPGHTQGHLVYLLDGEPYKGPSCLFSGDLLFLSGCGRT 263          
BLAST of CX301775 vs. ExPASy Swiss-Prot
Match: GLOB2_DICDI (Glyoxylase B2 OS=Dictyostelium discoideum GN=gloB2 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.249e-11
Identity = 49/164 (29.88%), Postives = 83/164 (50.61%), Query Frame = 2
Query:  278 EGSSSTYTYLLADAKTREAILIDPVL-----------ETVDRDLQQIKDLGLELKYTLNTHLHADHITGSGQLKLRSANAKSVI------------SIHS--------GAQADIHIDEFDFIEFGSWRVYAVATPGHTDGCISYVLDDLSRVFTGDTLLIRGCG 676
            E  S+T   ++ D +T++  ++D VL           +  D+ +  IK+  LE ++ L TH+HADH++G+  LK    NAK+ I            +I++        G+Q D    + +    GS +V  ++TPGHT  C+SY +++ S VF GDT+ +   G
Sbjct:   12 ELESATGQMIIIDEQTKKCAILDSVLNYTQNNGRTSTKDADKLIAYIKENQLEPEWILETHIHADHLSGAHYLKGIYPNAKTAIGEGAKIVQKTFKTIYNLEHTFPTDGSQFDKLFTDDERFTIGSLQVRVISTPGHTPACVSYYIENDS-VFVGDTMFMPDVG 174          
BLAST of CX301775 vs. ExPASy Swiss-Prot
Match: GLO2_CHICK (Hydroxyacylglutathione hydrolase, mitochondrial OS=Gallus gallus GN=HAGH PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.249e-11
Identity = 52/175 (29.71%), Postives = 79/175 (45.14%), Query Frame = 2
Query:  173 LHLQHYEQEPRLVTWLHTVIEHYFIKNPLIFRQYFEGSSSTYTYLLADAKTREAILIDPVLETVDRDLQQIKDLGLELKYTLNTHLHADHITGSGQL-KLRSANAKSVISIHSGAQADIHIDEFDFIEFGSWRVYAVATPGHTDGCISYVL-----DDLSRVFTGDTLLIRGCGR 679
            LH +H +++ + V   +  +E                 +  Y YLL D +T+EA ++DPV     + L  +K  G++L   L TH H DH  G+ +L KL +           GA     +     ++ GS  V  + TP HT G I Y +      +   VFTGDTL + GCG+
Sbjct:   34 LHTEHEQRKSKTVAQANMKVE------------VLPALTDNYMYLLIDEETKEAAIVDPV--QPQKVLDAVKKHGVKLTSVLTTHHHWDHAGGNEKLVKLETGLRVYGGDSRVGALTQ-KVSHLTSLKVGSLNVKCLCTPCHTSGHICYYVTKPNSSEPPAVFTGDTLFVAGCGK 193          
BLAST of CX301775 vs. ExPASy Swiss-Prot
Match: GLO2_DANRE (Hydroxyacylglutathione hydrolase, mitochondrial OS=Danio rerio GN=hagh PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.130e-11
Identity = 44/140 (31.43%), Postives = 69/140 (49.29%), Query Frame = 2
Query:  287 SSTYTYLLADAKTREAILIDPVLETVDRDLQQIKDLGLELKYTLNTHLHADHITGSGQLKLRSANAKSVISIHSG----AQADIHIDEFDFIEFGSWRVYAVATPGHTDGCISYVL-----DDLSRVFTGDTLLIRGCGR 679
            +  Y YLL D +T+EA ++DPV     + +  +K  G++LK  L TH H DH  G+ +L          ++++ G          +  ++  + GS  V  + TP HT G I Y +      +   VFTGDTL + GCG+
Sbjct:   53 TDNYMYLLIDEETKEAAIVDPV--EPQKVVDAVKKHGVKLKTVLTTHHHWDHAGGNEKL----VKLMPGLTVYGGDDRVGALTQKVTHYNTFKVGSLNVKCLFTPCHTSGHICYFVTKENSTEAPAVFTGDTLFVAGCGK 186          
BLAST of CX301775 vs. ExPASy Swiss-Prot
Match: GLO2_MACFA (Hydroxyacylglutathione hydrolase, mitochondrial OS=Macaca fascicularis GN=HAGH PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 3.633e-11
Identity = 47/140 (33.57%), Postives = 70/140 (50.00%), Query Frame = 2
Query:  287 SSTYTYLLADAKTREAILIDPVLETVDRDLQQIKDLGLELKYTLNTHLHADHITGSGQLKLRSANAKSVISIHSGAQ---ADIH-IDEFDFIEFGSWRVYAVATPGHTDGCISYVLD-----DLSRVFTGDTLLIRGCGR 679
            +  Y YL+ D +T+EA ++DPV     + L   +  G++L   L TH H DH  G+ +L       +S + ++ G     A  H I     ++ GS  V  +ATP HT G I Y +      +   VFTGDTL + GCG+
Sbjct:   58 TDNYMYLVIDDETKEAAIVDPVQP--QKVLDAARKHGVKLTTVLTTHHHWDHAGGNEKL----VKLQSGLKVYGGDDRIGALTHKITHLSTLQVGSLNVKCLATPCHTSGHICYFVSRPGGSEPPAVFTGDTLFVAGCGK 191          
BLAST of CX301775 vs. ExPASy Swiss-Prot
Match: GLO2_GLOVI (Hydroxyacylglutathione hydrolase OS=Gloeobacter violaceus GN=gloB PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.633e-11
Identity = 42/135 (31.11%), Postives = 65/135 (48.15%), Query Frame = 2
Query:  296 YTYLLADAKTREAILIDPVLETVDRDLQQIKDLGLELKYTLNTHLHADHITGSGQLKLRSANAKSVISIHSGAQ-------ADIHIDEFDFIEFGSWRVYAVATPGHTDGCISYVLDDLSRVFTGDTLLIRGCGR 679
            Y ++L D   R A ++DP        L+ +  LGL+L    NTH H DH+ G+ +L      A   I++++  +         + +++ D + FG  R   +  PGHT G I+Y       +F GDTL   GCGR
Sbjct:   13 YVFVLEDEAARTAAVVDPA--EARPVLEALVRLGLKLVAIFNTHHHHDHVGGNREL----LEAYPGIAVYASRRDRGRIPGQTVELEDGDTVAFGCERARVIFVPGHTHGHIAYHFAGCGHLFCGDTLFAGGCGR 141          
BLAST of CX301775 vs. ExPASy Swiss-Prot
Match: BLH_XYLFA (Beta-lactamase hydrolase-like protein OS=Xylella fastidiosa GN=blh PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.633e-11
Identity = 56/214 (26.17%), Postives = 97/214 (45.33%), Query Frame = 2
Query:  125 VSHRIHKDQIHAVAGRLHLQHYEQEPRLVTWLHTVIEHYFIKNPLIFRQYFEGSSSTYTYLLADAKTREAILIDPVLE-----------TVDRDLQQIKDLGLELKYTLNTHLHADHITGSGQLKLRSANAKSVISIH-------------------SGAQADIHIDEFDFIEFGSWRVYAVATPGHTDGCISYVLDDLSRVFTGDTLLIRGCG 676
            +  R+ +D++ A+    H   ++   R VTWL    E   I+ P +   +F+  +S+  Y++ D  T+   +IDPVL+             D  L  ++  GL +++ L+TH HADH + +  LK R+  A + I  H                   +G+Q D    + D    GS +   + +PGHT   ++YV+ D +  F  DT+ +   G
Sbjct:  110 IDGRMKRDEVEALG---HAHGFDLG-RAVTWL----ERQAIQTPRV-SGFFDPRTSSIQYVVTDQTTKRCAIIDPVLDFDEKSGATATTNADAILAHVEQQGLTVEWILDTHPHADHFSAAQYLKQRT-GAPTAIGTHVTEVQRLWREIYNWPTLSANGSQWDHLFADGDVFNVGSIKGRVMFSPGHTLASVTYVIGDTA--FVHDTIFMPDAG 311          
BLAST of CX301775 vs. ExPASy Swiss-Prot
Match: PNKD_BOVIN (Probable hydrolase PNKD OS=Bos taurus GN=PNKD PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.745e-11
Identity = 46/138 (33.33%), Postives = 66/138 (47.83%), Query Frame = 2
Query:  287 SSTYTYLLADAKTREAILIDPVLETVDRDLQQIKDLGLELKYTLNTHLHADHITGSGQLKLRSANAKSVISIHSGAQADIH-IDEFDFIEFGSWRVYAVATPGHTDGCISYVLD-----DLSRVFTGDTLLIRGCGRT 682
            S  Y+YL+ D + R A+ +DP           I+  G+ L   L TH H DH  G+  L  R  + +   S         H +   D +  G  ++ A+ATPGHT G + Y+LD       S +F+GD L + GCGRT
Sbjct:  128 SDNYSYLIIDTQARLAVAVDP--SDPQAVQASIEKEGVNLVAILCTHKHWDHSGGNRDLSRRHQDCRVYGSPQDSIPYLTHPLCHQDVVSVGRLQIRALATPGHTQGHLVYLLDGEPYEGPSCLFSGDLLFLSGCGRT 263          
BLAST of CX301775 vs. ExPASy Swiss-Prot
Match: GLO2_RHORT (Hydroxyacylglutathione hydrolase OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=gloB PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.745e-11
Identity = 47/135 (34.81%), Postives = 63/135 (46.67%), Query Frame = 2
Query:  287 SSTYTYLLADAKTREAILIDPVLETVDRDLQQIKDLGLELKYTLNTHLHADHITGSGQLKLRSANAKSVISIHSGAQADIHID----EFDFIEFGSWRVYAVATPGHTDGCISYVLDDLSRVFTGDTLLIRGCGR 679
            S  Y YL+    T    +IDP L   +  L   + LG  + + LNTH H DH  G+ ++K  +A    +I     A     ID    E D +  G      + TPGHT G I+Y   + S +F GDTL   GCGR
Sbjct:   13 SDNYIYLVRCRATGACAVIDPSL--AEPVLAAAESLGWTITHILNTHHHYDHTGGNEEIK--AATGCEIIGFAGDAHRLPGIDRTVVEGDRVAIGQAEARVIETPGHTLGHIAYWFAESSALFCGDTLFSAGCGR 143          
BLAST of CX301775 vs. ExPASy Swiss-Prot
Match: GLO2_PELUB (Hydroxyacylglutathione hydrolase OS=Pelagibacter ubique GN=gloB PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.094e-11
Identity = 44/132 (33.33%), Postives = 64/132 (48.48%), Query Frame = 2
Query:  296 YTYLLADAKTREAILIDPVLETVDRDLQQIKDLGLELKYTLNTHLHADHITGSGQLKLRSANAKSVISIHSG----AQADIHIDEFDFIEFGSWRVYAVATPGHTDGCISYVLDDLSRVFTGDTLLIRGCGR 679
            Y+YL+ D     A +IDP        ++ ++D  + LKY LNTH H DH+ G+ +LK       SVI          + DI + + D     +++      PGHT G I +   +   VFTGDTL   GCG+
Sbjct:   13 YSYLIVDKAKNIACVIDP--SEAKPVIKYLEDKNIHLKYILNTHHHYDHVGGNKELK--EKYGASVIGYKGDKDRIPEIDILVGDQDIWHEENFQAKIFHIPGHTLGHICFYFYNEESVFTGDTLFSLGCGK 140          
The following BLAST results are available for this feature:
BLAST of CX301775 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
PNKD_HUMAN1.249e-1128.50Probable hydrolase PNKD OS=Homo sapiens GN=PNKD PE... [more]
GLOB2_DICDI1.249e-1129.88Glyoxylase B2 OS=Dictyostelium discoideum GN=gloB2... [more]
GLO2_CHICK1.249e-1129.71Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]
GLO2_DANRE2.130e-1131.43Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]
GLO2_MACFA3.633e-1133.57Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]
GLO2_GLOVI3.633e-1131.11Hydroxyacylglutathione hydrolase OS=Gloeobacter vi... [more]
BLH_XYLFA3.633e-1126.17Beta-lactamase hydrolase-like protein OS=Xylella f... [more]
PNKD_BOVIN4.745e-1133.33Probable hydrolase PNKD OS=Bos taurus GN=PNKD PE=2... [more]
GLO2_RHORT4.745e-1134.81Hydroxyacylglutathione hydrolase OS=Rhodospirillum... [more]
GLO2_PELUB8.094e-1133.33Hydroxyacylglutathione hydrolase OS=Pelagibacter u... [more]

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Properties
Property NameValue
Genbank descriptionC08013E02SK PhyRootSw1 Citrus sinensis cDNA clone C08013E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX301775 ID=CX301775; Name=CX301775; organism=Citrus sinensis; type=EST; length=686bp
GAATTCGGCACGAGGCCGTATTTACAAGACCTTTGAGCACAATTTGTTGA
GTTTACCTGTGCCTGTTTTGATCTCTGGCGACTCTTTAGACTTCAACACT
GCTGCTTTACTCAGCTTTCTCGCTGTTTCTCATCGAATTCATAAGGATCA
GATTCATGCAGTGGCTGGAAGACTTCACCTTCAACACTATGAACAAGAGC
CAAGACTCGTTACATGGCTTCACACGGTCATCGAACATTATTTCATCAAG
AATCCTTTAATTTTTAGACAATATTTTGAAGGATCTTCATCGACTTATAC
ATATCTATTAGCTGATGCGAAGACAAGGGAAGCAATTCTCATCGATCCTG
TTCTCGAGACTGTTGACAGAGATTTGCAACAGATTAAAGATCTAGGATTA
GAGTTAAAATATACTCTTAACACTCATCTTCATGCTGATCACATCACAGG
CTCAGGACAACTAAAACTCAGAAGTGCGAATGCAAAATCCGTAATCTCGA
TTCATTCTGGCGCTCAAGCTGATATTCATATTGATGAATTTGATTTTATT
GAGTTTGGATCATGGAGGGTGTATGCTGTAGCCACACCTGGACATACTGA
TGGATGCATTTCTTATGTCTTAGATGACCTTTCTCGAGTATTTACTGGTG
ATACTCTATTGATTCGTGGATGTGGTCGCACTGACT
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