CX301764

Overview
NameCX301764
Unique NameCX301764
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length701
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX301764 vs. ExPASy Swiss-Prot
Match: ODP2_RHIME (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Rhizobium meliloti GN=pdhC PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.064e-21
Identity = 53/102 (51.96%), Postives = 72/102 (70.59%), Query Frame = 3
Query:    3 KAKYNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 308
            +AK   LKP++Y+GGT  V+N+G   G+K F A++NPP + ILAVG+ E RVV  +   +   ++ M+VTLS DHR +DGA+GAE L AFK YIENP  ML+
Sbjct:  349 RAKERKLKPEEYQGGTTAVSNMG-MMGVKDFAAVVNPPHATILAVGAGEDRVV--VRNKEMVIANVMTVTLSTDHRCVDGALGAELLAAFKRYIENPMGMLV 447          
BLAST of CX301764 vs. ExPASy Swiss-Prot
Match: ODP2_RICPR (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Rickettsia prowazekii GN=pdhC PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.814e-21
Identity = 55/102 (53.92%), Postives = 73/102 (71.57%), Query Frame = 3
Query:    3 KAKYNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 308
            KAK N L P +++GG FT++NLG  +GIK F AIIN PQS I+ VG++ KR +  +  DQ   ++ M VTLS DHRVIDGA+ AE+L +FK +IENP  ML+
Sbjct:  310 KAKDNKLTPIEFQGGGFTISNLG-MYGIKNFNAIINTPQSCIMGVGASTKRAI--VKNDQIIIATIMDVTLSADHRVIDGAVSAEFLASFKRFIENPVLMLI 408          
BLAST of CX301764 vs. ExPASy Swiss-Prot
Match: ODP2_RICTY (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Rickettsia typhi GN=pdhC PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.278e-21
Identity = 54/102 (52.94%), Postives = 73/102 (71.57%), Query Frame = 3
Query:    3 KAKYNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 308
            KAK N L P +++GG FT++NLG  +GIK F AIIN PQS I+ VG++ KR +  +  DQ   ++ M VTLS DHRVIDGA+ AE+L +FK +IE+P  ML+
Sbjct:  306 KAKDNKLTPVEFQGGGFTISNLG-MYGIKNFNAIINTPQSCIMGVGASTKRAI--VKNDQIIIATIMDVTLSADHRVIDGAVSAEFLASFKRFIEHPVLMLI 404          
BLAST of CX301764 vs. ExPASy Swiss-Prot
Match: ODP2_SCHPO (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Schizosaccharomyces pombe GN=SPCC794.07 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.421e-20
Identity = 51/103 (49.51%), Postives = 71/103 (68.93%), Query Frame = 3
Query:    3 KAKYNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQ-YKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 308
            +A+ N LKP++Y+GGTFT++NLG  F + QF AIINPPQ+ ILAVG+    VVP    ++ +K +  M  TLS DHRV+DGA+ A +  A K  +ENP  ++L
Sbjct:  382 RARNNKLKPEEYQGGTFTISNLG-MFPVDQFTAIINPPQACILAVGTTVDTVVPDSTSEKGFKVAPIMKCTLSSDHRVVDGAMAARFTTALKKILENPLEIML 483          
BLAST of CX301764 vs. ExPASy Swiss-Prot
Match: ODP2_NEUCR (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Neurospora crassa GN=mrp-3 PE=1 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 3.783e-19
Identity = 47/105 (44.76%), Postives = 69/105 (65.71%), Query Frame = 3
Query:    3 KAKYNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPD---QYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 308
            KA+   LKP++Y+GG+ +++N+G    ++ F AIINPPQ+ ILAVG+ +K  VP    D      +   + VT S DH+V+DGA+GAEW++  K  IENP  +LL
Sbjct:  354 KARDGKLKPEEYQGGSISISNMGMNPAVQSFTAIINPPQAAILAVGAPQKVAVPVENEDGTTGVSWDEQIIVTASFDHKVVDGAVGAEWIRELKKVIENPLELLL 458          
BLAST of CX301764 vs. ExPASy Swiss-Prot
Match: ODP2_ZYMMO (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Zymomonas mobilis GN=pdhC PE=3 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 1.877e-18
Identity = 48/101 (47.52%), Postives = 70/101 (69.31%), Query Frame = 3
Query:    3 KAKYNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESML 305
            +A+   L+PQ+Y+GGT +++N+G  FGIKQF A+INPPQ+ ILA+GS E+R  P +  D    ++  ++T S DHRVIDGA  A ++ AFK  +E P  +L
Sbjct:  341 RAREGRLQPQEYQGGTSSISNMG-MFGIKQFNAVINPPQASILAIGSGERR--PWVIDDAITIATVATITGSFDHRVIDGADAAAFMSAFKHLVEKPLGIL 438          
BLAST of CX301764 vs. ExPASy Swiss-Prot
Match: OPD21_ARATH (Dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex, mitochondrial OS=Arabidopsis thaliana GN=LTA3 PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 5.462e-18
Identity = 47/105 (44.76%), Postives = 67/105 (63.81%), Query Frame = 3
Query:    3 KAKYNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSF---MSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 308
            KA+   L P +++GGTF+++NLG  + +  FCAIINPPQ+GILAVG   K V P +G D  +  S    M+VTLS DHR+ DG +GA ++   +   E+   +LL
Sbjct:  534 KARSGKLAPHEFQGGTFSISNLG-MYPVDNFCAIINPPQAGILAVGRGNKVVEPVIGLDGIEKPSVVTKMNVTLSADHRIFDGQVGASFMSELRSNFEDVRRLLL 637          
BLAST of CX301764 vs. ExPASy Swiss-Prot
Match: ODP2_YEAST (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Saccharomyces cerevisiae GN=PDA2 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.039e-17
Identity = 43/103 (41.75%), Postives = 66/103 (64.08%), Query Frame = 3
Query:    3 KAKYNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQ-YKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 308
            +A+ N L P++++GGT  ++N+G    +  F +IINPPQS ILA+ + E+  V     +  + F + +++T + DHR IDGA GAE++K  K  IENP  MLL
Sbjct:  380 RARINKLAPEEFQGGTICISNMGMNNAVNMFTSIINPPQSTILAIATVERVAVEDAAAENGFSFDNQVTITGTFDHRTIDGAKGAEFMKELKTVIENPLEMLL 482          
BLAST of CX301764 vs. ExPASy Swiss-Prot
Match: ODPX_MOUSE (Pyruvate dehydrogenase protein X component, mitochondrial OS=Mus musculus GN=Pdhx PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.664e-14
Identity = 42/100 (42.00%), Postives = 62/100 (62.00%), Query Frame = 3
Query:    3 KAKYNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAE---KRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENP 293
            KA+   L P++Y+GG+F+++NLG  FGI +F A+INPPQ+ ILAVG      K      G  Q +    ++VT+S D RV+D  +   +L+ FK  +ENP
Sbjct:  399 KARDGKLMPEEYQGGSFSISNLG-MFGIDEFAAVINPPQACILAVGRFRPVLKLTEDEEGNPQLQQHQLITVTMSSDSRVVDDELATRFLETFKANLENP 497          
BLAST of CX301764 vs. ExPASy Swiss-Prot
Match: ODPX_HUMAN (Pyruvate dehydrogenase protein X component, mitochondrial OS=Homo sapiens GN=PDHX PE=1 SV=3)

HSP 1 Score: 77.7962 bits (190), Expect = 6.249e-14
Identity = 42/100 (42.00%), Postives = 63/100 (63.00%), Query Frame = 3
Query:    3 KAKYNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAE---KRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENP 293
            KA+   L P++Y+GG+F+++NLG  FGI +F A+INPPQ+ ILAVG      K      G  + +    ++VT+S D RV+D  +   +LK+FK  +ENP
Sbjct:  399 KARDGKLLPEEYQGGSFSISNLG-MFGIDEFTAVINPPQACILAVGRFRPVLKLTEDEEGNAKLQQRQLITVTMSSDSRVVDDELATRFLKSFKANLENP 497          
The following BLAST results are available for this feature:
BLAST of CX301764 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
ODP2_RHIME1.064e-2151.96Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_RICPR1.814e-2153.92Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_RICTY5.278e-2152.94Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_SCHPO3.421e-2049.51Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_NEUCR3.783e-1944.76Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_ZYMMO1.877e-1847.52Dihydrolipoyllysine-residue acetyltransferase comp... [more]
OPD21_ARATH5.462e-1844.76Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_YEAST6.039e-1741.75Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODPX_MOUSE3.664e-1442.00Pyruvate dehydrogenase protein X component, mitoch... [more]
ODPX_HUMAN6.249e-1442.00Pyruvate dehydrogenase protein X component, mitoch... [more]

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Properties
Property NameValue
Genbank descriptionC08013D03SK PhyRootSw1 Citrus sinensis cDNA clone C08013D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX301764 ID=CX301764; Name=CX301764; organism=Citrus sinensis; type=EST; length=701bp
AGAAAGCCAAATACAACAGCTTGAAACCACAAGATTATGAGGGAGGCACA
TTCACAGTTACCAATTTGGGAGGACCCTTCGGCATCAAGCAATTCTGTGC
CATTATCAATCCTCCTCAATCTGGCATTCTTGCAGTTGGATCTGCTGAGA
AAAGGGTTGTCCCTGGCTTGGGTCCAGATCAGTACAAATTTTCTTCCTTC
ATGTCGGTAACATTAAGTTGTGATCATCGCGTAATAGATGGTGCGATTGG
TGCTGAATGGTTGAAAGCATTCAAAGGATACATTGAGAATCCGGAGTCCA
TGTTGCTATAAGCCAAACTCTTCTTTTTCTAAGTTGAGAAGCTCTTTCCT
AGCTGTATCAGTTTAGATGGGGGCTTCAGTTCAACCCCTTCCACCTGGGA
TCAGATTGGCATGGTTGTGTCACTGAGCACATCTTGATTTTGTTTTTCAA
TTGGTAAACACTTTTATGCAAAATTTTTGGAATAAAAGCAGGGGATCGAG
GCATGAAACCAATCCTTAAACTCATACTCATCCTTGATAGGGTGTTCAAC
AAGGTGTTCTGCTATCGACCTTTCCTTAATGGATTTTTGGGTTACATACG
TGATGAACATGATTTTAGTAGAGTGTAATCGCCTCTTTCATGCGGGTAAT
AATTTGATTTATATATATTTTTTGGATTTTCCATTACCAGTGTTGTGTGA
A
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