CX301764

Overview
NameCX301764
Unique NameCX301764
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length701
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX301764 vs. ExPASy Swiss-Prot
Match: ODO2_DICDI (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Dictyostelium discoideum GN=odhB PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.952e-11
Identity = 42/101 (41.58%), Postives = 58/101 (57.43%), Query Frame = 3
Query:    6 AKYNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 308
            A+ ++L  +D  GGTFT++N GG FG      IINPPQS IL + + + R  P +   Q      M + L+ DHR+IDG     +LK  K  +ENPE +LL
Sbjct:  340 ARNDALAIEDSIGGTFTISN-GGVFGSMFGTPIINPPQSAILGMHAIKDR--PYVVNGQVVVRPIMYLALTYDHRIIDGREAVTFLKKIKDVLENPERILL 437          
BLAST of CX301764 vs. ExPASy Swiss-Prot
Match: ODO2_MOUSE (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Mus musculus GN=Dlst PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.467e-11
Identity = 42/102 (41.18%), Postives = 58/102 (56.86%), Query Frame = 3
Query:    3 KAKYNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 308
            KA+ N L  +D +GGTFT++N GG FG      IINPPQS IL + +   R V   G  + +    M V L+ DHR+IDG     +L+  K  +E+P  +LL
Sbjct:  354 KARKNELAIEDMDGGTFTISN-GGVFGSLFGTPIINPPQSAILGMHAIFDRPVAVGGKVEVR--PMMYVALTYDHRLIDGREAVTFLRKIKAAVEDPRVLLL 452          
BLAST of CX301764 vs. ExPASy Swiss-Prot
Match: ODO2_RAT (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus GN=Dlst PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 8.446e-11
Identity = 42/102 (41.18%), Postives = 57/102 (55.88%), Query Frame = 3
Query:    3 KAKYNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 308
            KA+ N L  +D +GGTFT++N GG FG      IINPPQS IL +     R V   G  + +    M V L+ DHR+IDG     +L+  K  +E+P  +LL
Sbjct:  354 KARKNELAIEDMDGGTFTISN-GGVFGSLFGTPIINPPQSAILGMHGIFDRPVAVGGKVEVR--PMMYVALTYDHRLIDGREAVTFLRKIKAAVEDPRVLLL 452          
BLAST of CX301764 vs. ExPASy Swiss-Prot
Match: ODO2_BOVIN (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Bos taurus GN=DLST PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 8.446e-11
Identity = 42/102 (41.18%), Postives = 58/102 (56.86%), Query Frame = 3
Query:    3 KAKYNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 308
            KA+ N L  +D +GGTFT++N GG FG      IINPPQS IL + +   R V   G  + +    M V L+ DHR+IDG     +L+  K  +E+P  +LL
Sbjct:  355 KARKNELAIEDMDGGTFTISN-GGVFGSLFGTPIINPPQSAILGMHAIVDRPVVIGGKVEVR--PMMYVALTYDHRLIDGREAVTFLRKIKAAVEDPRVLLL 453          
The following BLAST results are available for this feature:
BLAST of CX301764 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
ODO2_DICDI4.952e-1141.58Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_MOUSE6.467e-1141.18Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_RAT8.446e-1141.18Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_BOVIN8.446e-1141.18Dihydrolipoyllysine-residue succinyltransferase co... [more]

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Properties
Property NameValue
Genbank descriptionC08013D03SK PhyRootSw1 Citrus sinensis cDNA clone C08013D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX301764 ID=CX301764; Name=CX301764; organism=Citrus sinensis; type=EST; length=701bp
AGAAAGCCAAATACAACAGCTTGAAACCACAAGATTATGAGGGAGGCACA
TTCACAGTTACCAATTTGGGAGGACCCTTCGGCATCAAGCAATTCTGTGC
CATTATCAATCCTCCTCAATCTGGCATTCTTGCAGTTGGATCTGCTGAGA
AAAGGGTTGTCCCTGGCTTGGGTCCAGATCAGTACAAATTTTCTTCCTTC
ATGTCGGTAACATTAAGTTGTGATCATCGCGTAATAGATGGTGCGATTGG
TGCTGAATGGTTGAAAGCATTCAAAGGATACATTGAGAATCCGGAGTCCA
TGTTGCTATAAGCCAAACTCTTCTTTTTCTAAGTTGAGAAGCTCTTTCCT
AGCTGTATCAGTTTAGATGGGGGCTTCAGTTCAACCCCTTCCACCTGGGA
TCAGATTGGCATGGTTGTGTCACTGAGCACATCTTGATTTTGTTTTTCAA
TTGGTAAACACTTTTATGCAAAATTTTTGGAATAAAAGCAGGGGATCGAG
GCATGAAACCAATCCTTAAACTCATACTCATCCTTGATAGGGTGTTCAAC
AAGGTGTTCTGCTATCGACCTTTCCTTAATGGATTTTTGGGTTACATACG
TGATGAACATGATTTTAGTAGAGTGTAATCGCCTCTTTCATGCGGGTAAT
AATTTGATTTATATATATTTTTTGGATTTTCCATTACCAGTGTTGTGTGA
A
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