CX301750

Overview
NameCX301750
Unique NameCX301750
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length746
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX301750 vs. ExPASy Swiss-Prot
Match: GNAS_DROME (Guanine nucleotide-binding protein G(s) subunit alpha OS=Drosophila melanogaster GN=G-salpha60A PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.910e-41
Identity = 80/165 (48.48%), Postives = 111/165 (67.27%), Query Frame = 3
Query:  111 DALWKDPGITAVWNRRAEYQIIDSVSYYFDRINIIKSPSYIPDKDDIIHSRVRTSGIVTERYVIDNTIFEMYDVGGQRNERKKWIHCFEGVTAVIFVAAISEYDQKLFEDASTNRMVEALDLFEDICNNIFFLESSMILFLNKRDLFEKKIKTRNIRDTPAFSDY 605
            + LWKD G+   + R  EYQ+ID   Y+ DR++ IK+P+Y P++ DI+  RV TSGI   R+ +D   F M+DVGGQR+ER+KWI CF  VTA+IFV A S Y+  L ED + NR+ E+LDLF+ I NN +    S+ILFLNK+DL  +KIK    + +  FS++
Sbjct:  139 EELWKDKGVLQTYERSNEYQLIDCAKYFLDRVSTIKNPNYTPNEQDILRCRVLTSGIFETRFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVTACSSYNMVLREDPTQNRLRESLDLFKSIWNNRWLRTISIILFLNKQDLLAEKIKAGKSKLSEYFSEF 303          
BLAST of CX301750 vs. ExPASy Swiss-Prot
Match: GNAS_LYMST (Guanine nucleotide-binding protein G(s) subunit alpha OS=Lymnaea stagnalis PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 4.839e-41
Identity = 79/165 (47.88%), Postives = 108/165 (65.45%), Query Frame = 3
Query:  111 DALWKDPGITAVWNRRAEYQIIDSVSYYFDRINIIKSPSYIPDKDDIIHSRVRTSGIVTERYVIDNTIFEMYDVGGQRNERKKWIHCFEGVTAVIFVAAISEYDQKLFEDASTNRMVEALDLFEDICNNIFFLESSMILFLNKRDLFEKKIKTRNIRDTPAFSDY 605
            + LWKD G+ A + R  EYQ+ID   Y+ DR++II+   Y P + DI+  RV TSGI   ++ +D   F M+DVGGQR+ER+KWI CF  VTA+IFV A S Y+  L EDA+ NR+ E+LDLF+ I NN +    S+ILFLNK+DL  +K+K    +    F +Y
Sbjct:  133 EILWKDKGVQAAFERSNEYQLIDCAQYFLDRVHIIRQAEYTPSEQDILRCRVLTSGIFETKFSVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVTACSGYNMVLREDATQNRLKESLDLFKSIWNNRWLRTISVILFLNKQDLLAEKVKAGKSKIEDYFPEY 297          

HSP 2 Score: 21.9422 bits (45), Expect = 4.839e-41
Identity = 8/18 (44.44%), Postives = 10/18 (55.56%), Query Frame = 1
Query:  682 RSSIYHHVTCATDTKTFK 735
            R   Y H TCA DT+  +
Sbjct:  338 RHYCYPHFTCAVDTENIR 355          
BLAST of CX301750 vs. ExPASy Swiss-Prot
Match: GPA8_DICDI (Guanine nucleotide-binding protein alpha-8 subunit OS=Dictyostelium discoideum GN=gpaH PE=2 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 5.106e-41
Identity = 89/214 (41.59%), Postives = 129/214 (60.28%), Query Frame = 3
Query:   90 VKVGDAIDALWKDPGITAVWNRRAEYQIIDSVSYYFDRINIIKSPSYIPDKDDIIHSRVRTSGIVTERYVIDNTIFEMYDVGGQRNERKKWIHCFEGVTAVIFVAAISEYDQKLFEDASTNRMVEALDLFEDICNNIFFLESSMILFLNKRDLFEKKIKTRNIRDTPAFSDYTGKDGDYEAGVQYFVDKFLAKNKVVQIVN--LSSCYLCHRYK 725
            V +G  I+ LW+D  I  +W+RR+EY  +D+  YYF+ I       ++P ++D I +RVRT+GI    +      F + DVGGQRNERKKWIHCF+ V A++FV  ++ YDQ +FED S NRM E+L LF  ICNN  F E+   L LNK+DLFE+ I+  ++  +  F DY G   D +  +++   K+  K   +Q  N  L + ++  RYK
Sbjct:  120 VSIGLDIEELWRDEDIQKIWDRRSEYWFLDATPYYFENIQRFLDDDFVPTEEDCIMTRVRTTGISVTEFDEGPVHFRVVDVGGQRNERKKWIHCFDDVKALLFVVNLAGYDQVMFEDPSQNRMQESLTLFGQICNNPIFSETPTFLVLNKKDLFEQMIQKTDL--SKCFPDYKG-GSDVKTALEFIQMKYQQK---IQESNKPLHTFHIAARYK 327          
BLAST of CX301750 vs. ExPASy Swiss-Prot
Match: GPA4_DICDI (Guanine nucleotide-binding protein alpha-4 subunit OS=Dictyostelium discoideum GN=gpaD PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 8.223e-41
Identity = 81/188 (43.09%), Postives = 126/188 (67.02%), Query Frame = 3
Query:  108 IDALWKDPGITAVWNRRAE-YQIIDSVSYYFDRINIIKSPSYIPDKDDIIHSRVRTSGIVTERYVIDNTIFEMYDVGGQRNERKKWIHCFEGVTAVIFVAAISEYDQKLFEDASTNRMVEALDLFEDICNNIFFLESSMILFLNKRDLFEKKIKTRNIRDTPAFSDYTGKDGDYEAGVQYFVDKFLAK 668
            I  LW+D GI   + ++ + +Q+ DS +Y+FD I+      ++P++ D++  RVRT+GI    +  D    ++ DVGGQR++R+KWIHCF+ VTAVIFVAA+S+YDQ L ED S NR  E+L LF++I N  +F E+ ++LFLNK+DLF++K+K   ++    FSDYTG +  Y+    +   ++LA+
Sbjct:  122 IKHLWEDKGIKETYAQKDKHFQLNDSAAYFFDNIDRYMREDFVPNEQDVLRCRVRTTGIQESEFTFDKIRLKIVDVGGQRSQRRKWIHCFDCVTAVIFVAAMSDYDQVLREDESVNRTRESLALFKEIVNCDYFKETPIVLFLNKKDLFKEKLKRVPLQS--CFSDYTGPN-KYKDAAMFIQSQYLAQ 306          

HSP 2 Score: 25.7942 bits (55), Expect = 8.223e-41
Identity = 9/19 (47.37%), Postives = 12/19 (63.16%), Query Frame = 1
Query:  688 SIYHHVTCATDTKTFKLCY 744
            +IY H TCA DT+  K  +
Sbjct:  312 TIYTHATCAVDTENIKFVF 330          
BLAST of CX301750 vs. ExPASy Swiss-Prot
Match: GNAS_HOMAM (Guanine nucleotide-binding protein G(s) subunit alpha OS=Homarus americanus PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 2.368e-40
Identity = 87/196 (44.39%), Postives = 118/196 (60.20%), Query Frame = 3
Query:  111 DALWKDPGITAVWNRRAEYQIIDSVSYYFDRINIIKSPSYIPDKDDIIHSRVRTSGIVTERYVIDNTIFEMYDVGGQRNERKKWIHCFEGVTAVIFVAAISEYDQKLFEDASTNRMVEALDLFEDICNNIFFLESSMILFLNKRDLFEKKIKTRNIRDTPAFSDY----TGKDGDYEAG-------VQYFV-DKFL 662
            + LWKD G+ A + R  EYQ+ID   Y+ DR++I++   Y P + DI+  RV T GI   R+ +D   F M+DVGGQR+ER+KWI CF  VTA+IFV A S Y+  L ED S NR+ E+LDLF+ I NN +    S+ILFLNK+DL  +KI+    +    F D+    T  D   E G        +YF+ D+FL
Sbjct:  136 EMLWKDKGVQACYERANEYQLIDCAKYFLDRVHIVRQTDYTPTEQDILRCRVLTLGIFETRFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVTACSSYNMVLREDPSQNRLRESLDLFKSIWNNRWLRTISVILFLNKQDLLAEKIRAGKSKLEDYFPDFARYQTPLDATVEPGEDPEVVRAKYFIRDEFL 331          

HSP 2 Score: 21.557 bits (44), Expect = 2.368e-40
Identity = 7/14 (50.00%), Postives = 9/14 (64.29%), Query Frame = 1
Query:  694 YHHVTCATDTKTFK 735
            Y H TCA DT+  +
Sbjct:  345 YPHFTCAVDTENIR 358          
BLAST of CX301750 vs. ExPASy Swiss-Prot
Match: GNAQ_HOMAM (Guanine nucleotide-binding protein G(q) subunit alpha OS=Homarus americanus PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.369e-40
Identity = 82/189 (43.39%), Postives = 119/189 (62.96%), Query Frame = 3
Query:  105 AIDALWKDPGITAVWNRRAEYQIIDSVSYYFDRINIIKSPSYIPDKDDIIHSRVRTSGIVTERYVIDNTIFEMYDVGGQRNERKKWIHCFEGVTAVIFVAAISEYDQKLFEDASTNRMVEALDLFEDICNNIFFLESSMILFLNKRDLFEKKIKTRNIRDTPAFSDYTGKDGDYEAGVQYFVDKFLAKN 671
            A+++LW+D GI   ++RR EYQ+ DS  YY   ++ I +  Y+    DI+  R  T+GI+   + ++   F M DVGGQR+ER+KWIHCFE VT++IF+ A+SEYDQ LFE  + NRM E+  LF+ I    +F  SS+ILFLNK+DL E+KI   ++ D   F +Y G   D  A  ++ +  F+  N
Sbjct:  125 AMNSLWQDTGIQHCYDRRREYQLTDSAKYYLTDLDRIAAKDYVSTLQDILRVRAPTTGIIEYPFDLEEIRFRMVDVGGQRSERRKWIHCFENVTSIIFLVALSEYDQILFESDNENRMEESKALFKTIITYPWFQHSSVILFLNKKDLLEEKIMYSHLVD--YFPEYDGPRKDAIAAREFILRMFVELN 311          

HSP 2 Score: 26.1794 bits (56), Expect = 2.369e-40
Identity = 9/18 (50.00%), Postives = 12/18 (66.67%), Query Frame = 1
Query:  691 IYHHVTCATDTKTFKLCY 744
            IY H TCATDT+  +  +
Sbjct:  318 IYSHFTCATDTENIRFVF 335          
BLAST of CX301750 vs. ExPASy Swiss-Prot
Match: GNAS1_MOUSE (Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Mus musculus GN=Gnas PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 3.977e-40
Identity = 87/195 (44.62%), Postives = 122/195 (62.56%), Query Frame = 3
Query:  114 ALWKDPGITAVWNRRAEYQIIDSVSYYFDRINIIKSPSYIPDKDDIIHSRVRTSGIVTERYVIDNTIFEMYDVGGQRNERKKWIHCFEGVTAVIFVAAISEYDQKLFEDASTNRMVEALDLFEDICNNIFFLESSMILFLNKRDLFEKKI---KTRNIRDTPAFSDY-TGKDGDYEAG-------VQYFV-DKFL 662
            ALW+D G+ A + R  EYQ+ID   Y+ D+I++IK   Y+P   D++  RV TSGI   ++ +D   F M+DVGGQR+ER+KWI CF  VTA+IFV A S Y+  + ED  TNR+ EAL+LF+ I NN +    S+ILFLNK+DL  +K+   K++     P F+ Y T +D   E G        +YF+ D+FL
Sbjct:  891 ALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPSDQDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDATPEPGEDPRVTRAKYFIRDEFL 1085          

HSP 2 Score: 21.9422 bits (45), Expect = 3.977e-40
Identity = 8/18 (44.44%), Postives = 10/18 (55.56%), Query Frame = 1
Query:  682 RSSIYHHVTCATDTKTFK 735
            R   Y H TCA DT+  +
Sbjct: 1095 RHYCYPHFTCAVDTENIR 1112          
BLAST of CX301750 vs. ExPASy Swiss-Prot
Match: GNAS1_HUMAN (Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Homo sapiens GN=GNAS PE=1 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 3.980e-40
Identity = 87/195 (44.62%), Postives = 122/195 (62.56%), Query Frame = 3
Query:  114 ALWKDPGITAVWNRRAEYQIIDSVSYYFDRINIIKSPSYIPDKDDIIHSRVRTSGIVTERYVIDNTIFEMYDVGGQRNERKKWIHCFEGVTAVIFVAAISEYDQKLFEDASTNRMVEALDLFEDICNNIFFLESSMILFLNKRDLFEKKI---KTRNIRDTPAFSDY-TGKDGDYEAG-------VQYFV-DKFL 662
            ALW+D G+ A + R  EYQ+ID   Y+ D+I++IK   Y+P   D++  RV TSGI   ++ +D   F M+DVGGQR+ER+KWI CF  VTA+IFV A S Y+  + ED  TNR+ EAL+LF+ I NN +    S+ILFLNK+DL  +K+   K++     P F+ Y T +D   E G        +YF+ D+FL
Sbjct:  795 ALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPSDQDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDATPEPGEDPRVTRAKYFIRDEFL 989          

HSP 2 Score: 21.9422 bits (45), Expect = 3.980e-40
Identity = 8/18 (44.44%), Postives = 10/18 (55.56%), Query Frame = 1
Query:  682 RSSIYHHVTCATDTKTFK 735
            R   Y H TCA DT+  +
Sbjct:  999 RHYCYPHFTCAVDTENIR 1016          
BLAST of CX301750 vs. ExPASy Swiss-Prot
Match: GNAS_MESAU (Guanine nucleotide-binding protein G(s) subunit alpha OS=Mesocricetus auratus GN=GNAS PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 4.018e-40
Identity = 87/195 (44.62%), Postives = 122/195 (62.56%), Query Frame = 3
Query:  114 ALWKDPGITAVWNRRAEYQIIDSVSYYFDRINIIKSPSYIPDKDDIIHSRVRTSGIVTERYVIDNTIFEMYDVGGQRNERKKWIHCFEGVTAVIFVAAISEYDQKLFEDASTNRMVEALDLFEDICNNIFFLESSMILFLNKRDLFEKKI---KTRNIRDTPAFSDY-TGKDGDYEAG-------VQYFV-DKFL 662
            ALW+D G+ A + R  EYQ+ID   Y+ D+I++IK   Y+P   D++  RV TSGI   ++ +D   F M+DVGGQR+ER+KWI CF  VTA+IFV A S Y+  + ED  TNR+ EAL+LF+ I NN +    S+ILFLNK+DL  +K+   K++     P F+ Y T +D   E G        +YF+ D+FL
Sbjct:  152 ALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPSDQDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDATPEPGEDPRVTRAKYFIRDEFL 346          

HSP 2 Score: 21.9422 bits (45), Expect = 4.018e-40
Identity = 8/18 (44.44%), Postives = 10/18 (55.56%), Query Frame = 1
Query:  682 RSSIYHHVTCATDTKTFK 735
            R   Y H TCA DT+  +
Sbjct:  356 RHYCYPHFTCAVDTENIR 373          
BLAST of CX301750 vs. ExPASy Swiss-Prot
Match: GNAS_CRILO (Guanine nucleotide-binding protein G(s) subunit alpha OS=Cricetulus longicaudatus GN=GNAS PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 4.018e-40
Identity = 87/195 (44.62%), Postives = 122/195 (62.56%), Query Frame = 3
Query:  114 ALWKDPGITAVWNRRAEYQIIDSVSYYFDRINIIKSPSYIPDKDDIIHSRVRTSGIVTERYVIDNTIFEMYDVGGQRNERKKWIHCFEGVTAVIFVAAISEYDQKLFEDASTNRMVEALDLFEDICNNIFFLESSMILFLNKRDLFEKKI---KTRNIRDTPAFSDY-TGKDGDYEAG-------VQYFV-DKFL 662
            ALW+D G+ A + R  EYQ+ID   Y+ D+I++IK   Y+P   D++  RV TSGI   ++ +D   F M+DVGGQR+ER+KWI CF  VTA+IFV A S Y+  + ED  TNR+ EAL+LF+ I NN +    S+ILFLNK+DL  +K+   K++     P F+ Y T +D   E G        +YF+ D+FL
Sbjct:  152 ALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPSDQDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDATPEPGEDPRVTRAKYFIRDEFL 346          

HSP 2 Score: 21.9422 bits (45), Expect = 4.018e-40
Identity = 8/18 (44.44%), Postives = 10/18 (55.56%), Query Frame = 1
Query:  682 RSSIYHHVTCATDTKTFK 735
            R   Y H TCA DT+  +
Sbjct:  356 RHYCYPHFTCAVDTENIR 373          
The following BLAST results are available for this feature:
BLAST of CX301750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
GNAS_DROME3.910e-4148.48Guanine nucleotide-binding protein G(s) subunit al... [more]
GNAS_LYMST4.839e-4147.88Guanine nucleotide-binding protein G(s) subunit al... [more]
GPA8_DICDI5.106e-4141.59Guanine nucleotide-binding protein alpha-8 subunit... [more]
GPA4_DICDI8.223e-4143.09Guanine nucleotide-binding protein alpha-4 subunit... [more]
GNAS_HOMAM2.368e-4044.39Guanine nucleotide-binding protein G(s) subunit al... [more]
GNAQ_HOMAM2.369e-4043.39Guanine nucleotide-binding protein G(q) subunit al... [more]
GNAS1_MOUSE3.977e-4044.62Guanine nucleotide-binding protein G(s) subunit al... [more]
GNAS1_HUMAN3.980e-4044.62Guanine nucleotide-binding protein G(s) subunit al... [more]
GNAS_MESAU4.018e-4044.62Guanine nucleotide-binding protein G(s) subunit al... [more]
GNAS_CRILO4.018e-4044.62Guanine nucleotide-binding protein G(s) subunit al... [more]

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Properties
Property NameValue
Genbank descriptionC08013B10SK PhyRootSw1 Citrus sinensis cDNA clone C08013B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX301750 ID=CX301750; Name=CX301750; organism=Citrus sinensis; type=EST; length=746bp
AAACGGTTGCATTTAATATGGTATCACAAGTACAAGCAAAAGATGAATTT
GAGATGATTAAAGGTATGGATGAAAATGATGTAATTAATGTCAAAGTTGG
TGATGCCATTGATGCATTATGGAAAGATCCTGGTATTACTGCTGTCTGGA
ATCGTCGTGCTGAGTATCAGATTATTGATTCTGTGTCTTACTACTTTGAT
CGTATTAACATTATTAAAAGTCCTTCTTATATTCCTGATAAAGATGATAT
TATCCACTCACGAGTTCGTACATCAGGTATTGTCACTGAGCGTTATGTGA
TAGATAATACTATTTTCGAAATGTATGACGTTGGTGGACAACGTAATGAA
CGTAAGAAATGGATTCATTGTTTTGAAGGTGTTACTGCCGTCATTTTCGT
TGCTGCTATTTCTGAGTATGATCAAAAACTGTTTGAGGATGCTTCAACAA
ATCGTATGGTGGAAGCATTAGATTTATTTGAAGATATTTGTAATAATATT
TTCTTTTTAGAATCATCCATGATTTTATTTTTAAATAAACGCGATTTATT
TGAAAAGAAAATTAAAACAAGAAATATTCGCGATACACCAGCATTTTCTG
ATTATACTGGTAAAGATGGTGATTATGAAGCCGGTGTACAATACTTTGTT
GATAAATTTTTGGCTAAAAATAAAGTGGTTCAGATCGTCAATTTATCATC
ATGTTACTTGTGCCACCGATACAAAGACGTTCAAATTGTGTTATGC
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