CX301750

Overview
NameCX301750
Unique NameCX301750
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length746
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX301750 vs. ExPASy Swiss-Prot
Match: GPA1_KLULA (Guanine nucleotide-binding protein alpha-1 subunit OS=Kluyveromyces lactis GN=GPA1 PE=3 SV=4)

HSP 1 Score: 184.496 bits (467), Expect = 1.347e-47
Identity = 96/211 (45.50%), Postives = 136/211 (64.45%), Query Frame = 3
Query:   45 EFEMIKGMDENDVINVKVGDAIDALW-KDPGITAVWNRRAEYQIIDSVSYYFDRINIIKSPSYIPDKDDIIHSRVRTSGIVTERYVIDNTIFEMYDVGGQRNERKKWIHCFEGVTAVIFVAAISEYDQKLFEDASTNRMVEALDLFEDICNNIFFLESSMILFLNKRDLFEKKIKTRNIRDTPAFSDYTGKDGDYEAGVQYFVDKFLAKNK 674
            E   +K +D++   N ++  AI  LW +D GI   +NR +E+Q+  S SYYFD I       Y+ D  DI+  R++T+GI    + I  + F++YD GGQR+ER+KWIHCFEG+TAV+FV AISEYDQ LFED   NRM E++ L + + N+ +F  +  ILFLNK D+F++K+K   IR    F +Y GK GD E G++YF   FL+ N+
Sbjct:  201 ETSELKRIDQST--NEEIAYAIKKLWTQDKGIRQCFNRSSEFQLEGSASYYFDNIEKFARVDYVCDDMDILKGRIKTTGITENSFKIGPSTFKVYDAGGQRSERRKWIHCFEGITAVVFVIAISEYDQMLFEDERVNRMHESIVLLDTLLNSRWFANTPFILFLNKVDIFQEKVKRSPIRTW--FPNYPGKLGDSETGLKYFESLFLSLNR 407          

HSP 2 Score: 25.0238 bits (53), Expect = 1.347e-47
Identity = 10/27 (37.04%), Postives = 16/27 (59.26%), Query Frame = 1
Query:  655 NFWLKIKWFRSSIYHHVTCATDTKTFK 735
            + +L +      IY H TCATDT++ +
Sbjct:  400 SLFLSLNRSNKPIYVHRTCATDTQSMR 426          
BLAST of CX301750 vs. ExPASy Swiss-Prot
Match: GPA4_CAEBR (Guanine nucleotide-binding protein alpha-4 subunit OS=Caenorhabditis briggsae GN=gpa-4 PE=3 SV=3)

HSP 1 Score: 183.726 bits (465), Expect = 1.349e-47
Identity = 90/193 (46.63%), Postives = 128/193 (66.32%), Query Frame = 3
Query:   33 QAKDEFEMIKGMDENDVINVKVGDAIDALWKDPGITAVWNRRAEYQIIDSVSYYFDRINIIKSPSYIPDKDDIIHSRVRTSGIVTERYVIDNTIFEMYDVGGQRNERKKWIHCFEGVTAVIFVAAISEYDQKLFEDASTNRMVEALDLFEDICNNIFFLESSMILFLNKRDLFEKKIKTRNIRDTPAFSDYTG 611
            Q    +  I   D ++  ++++ D +  LW D G+   + R  E+Q+ DS  YYF+ ++ I   +Y+P +DDI+ +RV+++GIV   ++  +  F M+DVGGQR+ERKKWIHCFEGVTAVIF  A+SEYD KL ED   NRM E++ LF+ I NN +F E+SMILFLNK D+FE+KI  R+I     F +Y G
Sbjct:  105 QFSSHYLHIHNADLSEAFSLELSDLMKNLWSDAGVRRCFKRSREFQLNDSTEYYFNSLDRISETTYLPTQDDILRARVKSTGIVETDFMYKDIYFRMFDVGGQRSERKKWIHCFEGVTAVIFCVALSEYDMKLAEDKIMNRMHESMQLFDSIVNNRWFTETSMILFLNKMDIFEEKI--RHIPLNICFPEYKG 295          

HSP 2 Score: 25.7942 bits (55), Expect = 1.349e-47
Identity = 8/21 (38.10%), Postives = 12/21 (57.14%), Query Frame = 1
Query:  682 RSSIYHHVTCATDTKTFKLCY 744
            +  +Y H TCATDT   +  +
Sbjct:  321 QKEVYSHFTCATDTNNIRFVF 341          
BLAST of CX301750 vs. ExPASy Swiss-Prot
Match: GNAI_DROME (Guanine nucleotide-binding protein G(i) subunit alpha 65A OS=Drosophila melanogaster GN=G-ialpha65A PE=2 SV=2)

HSP 1 Score: 182.185 bits (461), Expect = 1.349e-47
Identity = 90/186 (48.39%), Postives = 125/186 (67.20%), Query Frame = 3
Query:  117 LWKDPGITAVWNRRAEYQIIDSVSYYFDRINIIKSPSYIPDKDDIIHSRVRTSGIVTERYVIDNTIFEMYDVGGQRNERKKWIHCFEGVTAVIFVAAISEYDQKLFEDASTNRMVEALDLFEDICNNIFFLESSMILFLNKRDLFEKKIKTRNIRDTPAFSDYTGKDGDYEAGVQYFVDKFLAKNK 674
            LW D G+   + R  EYQ+ DS  YY + ++ I  P+YIP + D++ +RV+T+GI+   +      F+++DVGGQR+ERKKWIHCFEGVTA+IF  A+S YD  L ED   NRM+E+L LF+ ICN+ +F+E+S+ILFLNK+DLFE+KIK   +  T  F +YTG +  +E    Y   KF   NK
Sbjct:  131 LWADGGVQQSFARSREYQLNDSAGYYLNSLDRIAQPNYIPTQQDVLRTRVKTTGIIETHFSCKQLHFKLFDVGGQRSERKKWIHCFEGVTAIIFCVALSGYDLVLAEDEEMNRMIESLKLFDSICNSKWFVETSIILFLNKKDLFEEKIKRSPL--TICFPEYTGTN-TFEEAANYIRMKFENLNK 313          

HSP 2 Score: 27.335 bits (59), Expect = 1.349e-47
Identity = 10/21 (47.62%), Postives = 13/21 (61.90%), Query Frame = 1
Query:  682 RSSIYHHVTCATDTKTFKLCY 744
            +  IY H+TCATDT   K  +
Sbjct:  317 QKEIYTHLTCATDTNNVKFVF 337          
BLAST of CX301750 vs. ExPASy Swiss-Prot
Match: GPA16_CAEBR (Guanine nucleotide-binding protein alpha-16 subunit OS=Caenorhabditis briggsae GN=gpa-16 PE=3 SV=3)

HSP 1 Score: 186.422 bits (472), Expect = 1.759e-47
Identity = 92/201 (45.77%), Postives = 135/201 (67.16%), Query Frame = 3
Query:   72 ENDVINVKVGDAIDALWKDPGITAVWNRRAEYQIIDSVSYYFDRINIIKSPSYIPDKDDIIHSRVRTSGIVTERYVIDNTIFEMYDVGGQRNERKKWIHCFEGVTAVIFVAAISEYDQKLFEDASTNRMVEALDLFEDICNNIFFLESSMILFLNKRDLFEKKIKTRNIRDTPAFSDYTGKDGDYEAGVQYFVDKFLAKNK 674
            E D I  ++   + ++W D GI     R  EYQ+ DS  YY  +++ I    YIP +DD++ +R++T+GIV  +++  + +F ++DVGGQR+ERKKWIHCFE VTA+IF  A+SEYD  L ED  TNRM E+L +F+ ICN+ +F+E+S+ILFLNK+DLFE+KIK   +  T  F +YTG D +++ G  +   +F   NK
Sbjct:  114 EEDEIPDELAALMKSVWSDEGIQKAVARSREYQLNDSAEYYLSQLDRICEADYIPTQDDVLRTRIKTTGIVETQFIFKDRLFVVFDVGGQRSERKKWIHCFEDVTALIFCVAMSEYDMVLMEDRKTNRMRESLKVFDSICNSKWFVETSIILFLNKKDLFEEKIKKSPL--TYCFPEYTGHD-NFDDGSAFIQKQFEIVNK 311          

HSP 2 Score: 22.7126 bits (47), Expect = 1.759e-47
Identity = 8/21 (38.10%), Postives = 11/21 (52.38%), Query Frame = 1
Query:  682 RSSIYHHVTCATDTKTFKLCY 744
            +  IY   TCATDT   +  +
Sbjct:  316 QKEIYTQFTCATDTNNIRFVF 336          
BLAST of CX301750 vs. ExPASy Swiss-Prot
Match: GNAI1_ORYLA (Guanine nucleotide-binding protein G(i) subunit alpha-1 OS=Oryzias latipes GN=gnai1 PE=2 SV=3)

HSP 1 Score: 188.348 bits (477), Expect = 3.651e-47
Identity = 101/245 (41.22%), Postives = 149/245 (60.82%), Query Frame = 3
Query:   15 NMVSQVQAKDEFEM--IKGMDENDVINVKVGDAIDALWKDPGITAVWNRRAEYQIIDSVSYYFDRINIIKSPSYIPDKDDIIHSRVRTSGIVTERYVIDNTIFEMYDVGGQRNERKKWIHCFEGVTAVIFVAAISEYDQKLFEDASTNRMVEALDLFEDICNNIFFLESSMILFLNKRDLFEKKIKTRNIRDTPAFSDYTGKDGDYEAGVQYFVDKFLAKNKVVQIVNLSSCYLCHR-YKDVQIV 740
            +   Q +A D  ++  + G  E   +  ++   I  LWKD G+ A ++R  EYQ+ DS +YY + ++ I   SY+P + D++ +RV+T+GIV   +   +  F+M+DVGGQR+ERKKWIHCFEGVTA+IF  A+S+YD  L ED   N M E++ LF+ ICNN +F ++S+ILFLNK+DLFE+KIK   +  T  F +Y G +  YE    Y   +F   NK      + + + C    K+VQ V
Sbjct:   94 DFADQARADDARQLFILAGSTEEGFMTGELAGVIQRLWKDGGVQACFSRSREYQLNDSAAYYLNDLDRISHASYVPTQQDVLRTRVKTTGIVETHFTFKDLHFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSDYDLVLAEDEEMNGMHESMKLFDSICNNKWFTDTSIILFLNKKDLFEEKIKKSLL--TICFPEYAGSN-TYEEAAAYVQCQFEDLNKRKDTKEIYTHFTCATDTKNVQFV 335          
BLAST of CX301750 vs. ExPASy Swiss-Prot
Match: GNAI2_MOUSE (Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Mus musculus GN=Gnai2 PE=1 SV=4)

HSP 1 Score: 187.193 bits (474), Expect = 8.133e-47
Identity = 99/236 (41.95%), Postives = 142/236 (60.17%), Query Frame = 3
Query:   36 AKDEFEMIKGMDENDVINVKVGDAIDALWKDPGITAVWNRRAEYQIIDSVSYYFDRINIIKSPSYIPDKDDIIHSRVRTSGIVTERYVIDNTIFEMYDVGGQRNERKKWIHCFEGVTAVIFVAAISEYDQKLFEDASTNRMVEALDLFEDICNNIFFLESSMILFLNKRDLFEKKIKTRNIRDTPAFSDYTGKDGDYEAGVQYFVDKFLAKNKVVQIVNLSSCYLCHR-YKDVQIV 740
            A+  F +    +E  ++   +   I  LW D G+ A + R  EYQ+ DS +YY + +  I    YIP + D++ +RV+T+GIV   +   +  F+M+DVGGQR+ERKKWIHCFEGVTA+IF  A+S YD  L ED   NRM E++ LF+ ICNN +F ++S+ILFLNK+DLFE+KI   ++  T  F +YTG +  Y+    Y   KF   NK      + + + C    K+VQ V
Sbjct:  104 ARQLFALSCAAEEQGMLPEDLSGVIRRLWADHGVQACFGRSREYQLNDSAAYYLNDLERIAQSDYIPTQQDVLRTRVKTTGIVETHFTFKDLHFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSAYDLVLAEDEEMNRMHESMKLFDSICNNKWFTDTSIILFLNKKDLFEEKITQSSL--TICFPEYTGAN-KYDEAASYIQSKFEDLNKRKDTKEIYTHFTCATDTKNVQFV 336          
BLAST of CX301750 vs. ExPASy Swiss-Prot
Match: GNAI2_CHICK (Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Gallus gallus GN=GNAI2 PE=2 SV=2)

HSP 1 Score: 187.193 bits (474), Expect = 8.133e-47
Identity = 100/236 (42.37%), Postives = 143/236 (60.59%), Query Frame = 3
Query:   36 AKDEFEMIKGMDENDVINVKVGDAIDALWKDPGITAVWNRRAEYQIIDSVSYYFDRINIIKSPSYIPDKDDIIHSRVRTSGIVTERYVIDNTIFEMYDVGGQRNERKKWIHCFEGVTAVIFVAAISEYDQKLFEDASTNRMVEALDLFEDICNNIFFLESSMILFLNKRDLFEKKIKTRNIRDTPAFSDYTGKDGDYEAGVQYFVDKFLAKNKVVQIVNLSSCYLCHR-YKDVQIV 740
            A+  F +    +E  ++   + + I  LW D G+ A +NR  EYQ+ DS +YY + +  I    YIP + D++ +RV+T+GIV   +   +  F+M+DVGGQR+ERKKWIHCFEGVTA+IF  A+S YD  L ED   NRM E++ LF+ ICNN +F ++S+ILFLNK+DLFE+KI    +  T  F +YTG +  Y+    Y   KF   NK      + + + C    K+VQ V
Sbjct:  104 ARQLFALACTAEEQGIMPEDLANVIRRLWADHGVQACFNRSREYQLNDSAAYYLNDLERIARADYIPTQQDVLRTRVKTTGIVETHFTFKDLHFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSAYDLVLAEDEEMNRMHESMKLFDSICNNKWFTDTSIILFLNKKDLFEEKIVHSPL--TICFPEYTGAN-KYDEAAGYIQSKFEDLNKRKDTKEIYTHFTCATDTKNVQFV 336          
BLAST of CX301750 vs. ExPASy Swiss-Prot
Match: GNAO_MANSE (Guanine nucleotide-binding protein G(o) subunit alpha OS=Manduca sexta PE=2 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 1.062e-46
Identity = 96/220 (43.64%), Postives = 142/220 (64.55%), Query Frame = 3
Query:   15 NMVSQVQAKDEFEMIKGMDENDVINVKVGDAIDALWKDPGITAVWNRRAEYQIIDSVSYYFDRINIIKSPSYIPDKDDIIHSRVRTSGIVTERYVIDNTIFEMYDVG-GQRNERKKWIHCFEGVTAVIFVAAISEYDQKLFEDASTNRMVEALDLFEDICNNIFFLESSMILFLNKRDLFEKKIKTRNIRDTPAFSDYTGKDGDYEAGVQYFVDKFLAKN 671
            N   +   K  F++I+ M++ +  + ++  A+  LW D G+   + R  EYQ+ DS  Y+ D ++ + +  Y P ++DI+ +RV+T+GIV   +   N  F+++DVG GQR+ERKKWIHCFE VTA+IF  A+SEYDQ L ED +TNRM E+L LF+ ICNN +F ++S+ILFLNK+DLFE+KI+   +  T  F +YT    +Y     Y   +F AKN
Sbjct:   97 NKDRESDGKMVFDVIQRMEDTEPFSEELLAAMKRLWADAGVQECFGRSNEYQLNDSAKYFLDDLDRLGARDYQPTEEDILRTRVKTTGIVEVHFSFKNLNFKLFDVGRGQRSERKKWIHCFEDVTAIIFCVAMSEYDQVLHEDETTNRMQESLKLFDSICNNKWFTDTSIILFLNKKDLFEEKIRKSPL--TICFPEYTRAYQEYGEAAAYIRSQFEAKN 314          
BLAST of CX301750 vs. ExPASy Swiss-Prot
Match: GNAZ_RAT (Guanine nucleotide-binding protein G(z) subunit alpha OS=Rattus norvegicus GN=Gnaz PE=2 SV=3)

HSP 1 Score: 181.03 bits (458), Expect = 1.123e-46
Identity = 91/199 (45.73%), Postives = 127/199 (63.82%), Query Frame = 3
Query:  117 LWKDPGITAVWNRRAEYQIIDSVSYYFDRINIIKSPSYIPDKDDIIHSRVRTSGIVTERYVIDNTIFEMYDVGGQRNERKKWIHCFEGVTAVIFVAAISEYDQKLFEDASTNRMVEALDLFEDICNNIFFLESSMILFLNKRDLFEKKIKTRNIRDTPAFSDYTGKDGDYEAGVQYFVDKFLAKNKVVQIVNLSSCYLC 713
            LW DPG  A + R +EY + D+ +YY + +  I +P YIP  +DI+ SR  T+GIV  ++      F+M DVGGQR+ERKKWIHCFEGVTA+IF   +S YD KL+ED  T+RM E+L LF+ ICNN +F+ +S+ILFLNK+DL  +KI  R I  +  F +Y G++  YE    Y   +F   N+  +   + S + C
Sbjct:  131 LWADPGAQACFGRSSEYHLEDNAAYYLNDLERIAAPDYIPTVEDILRSRDMTTGIVENKFTFKELTFKMVDVGGQRSERKKWIHCFEGVTAIIFCVELSGYDLKLYEDNQTSRMAESLRLFDSICNNNWFINTSLILFLNKKDLLSEKI--RRIPLSVCFPEYKGQN-TYEEAAVYIQRQFEDLNRNKETKEIYSHFTC 326          

HSP 2 Score: 25.409 bits (54), Expect = 1.123e-46
Identity = 9/18 (50.00%), Postives = 11/18 (61.11%), Query Frame = 1
Query:  691 IYHHVTCATDTKTFKLCY 744
            IY H TCATDT   +  +
Sbjct:  320 IYSHFTCATDTSNIQFVF 337          
BLAST of CX301750 vs. ExPASy Swiss-Prot
Match: GNAI2_CANFA (Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Canis familiaris GN=GNAI2 PE=2 SV=2)

HSP 1 Score: 186.422 bits (472), Expect = 1.387e-46
Identity = 101/236 (42.80%), Postives = 141/236 (59.75%), Query Frame = 3
Query:   36 AKDEFEMIKGMDENDVINVKVGDAIDALWKDPGITAVWNRRAEYQIIDSVSYYFDRINIIKSPSYIPDKDDIIHSRVRTSGIVTERYVIDNTIFEMYDVGGQRNERKKWIHCFEGVTAVIFVAAISEYDQKLFEDASTNRMVEALDLFEDICNNIFFLESSMILFLNKRDLFEKKIKTRNIRDTPAFSDYTGKDGDYEAGVQYFVDKFLAKNKVVQIVNLSSCYLCHR-YKDVQIV 740
            A+  F +    +E  V+   +   I  LW D G+ A + R  EYQ+ DS +YY + +  I    YIP + D++ +RV+T+GIV   +   +  F+M+DVGGQR+ERKKWIHCFEGVTA+IF  A+S YD  L ED   NRM E++ LF+ ICNN +F ++S+ILFLNK+DLFE+KI    +  T  F +YTG +  YE    Y   KF   NK      + + + C    K+VQ V
Sbjct:  104 ARQLFALSCTAEEQGVLPEDLSCVIRRLWADNGVQACFGRSREYQLNDSAAYYLNDLERIAQSDYIPTQQDVLRTRVKTTGIVETHFTFKDLHFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSAYDLVLAEDEEMNRMHESMKLFDSICNNKWFTDTSIILFLNKKDLFEEKITHSPL--TICFPEYTGAN-KYEEAASYIQSKFEDLNKRKDTKEIYTHFTCATDTKNVQFV 336          
The following BLAST results are available for this feature:
BLAST of CX301750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
GPA1_KLULA1.347e-4745.50Guanine nucleotide-binding protein alpha-1 subunit... [more]
GPA4_CAEBR1.349e-4746.63Guanine nucleotide-binding protein alpha-4 subunit... [more]
GNAI_DROME1.349e-4748.39Guanine nucleotide-binding protein G(i) subunit al... [more]
GPA16_CAEBR1.759e-4745.77Guanine nucleotide-binding protein alpha-16 subuni... [more]
GNAI1_ORYLA3.651e-4741.22Guanine nucleotide-binding protein G(i) subunit al... [more]
GNAI2_MOUSE8.133e-4741.95Guanine nucleotide-binding protein G(i) subunit al... [more]
GNAI2_CHICK8.133e-4742.37Guanine nucleotide-binding protein G(i) subunit al... [more]
GNAO_MANSE1.062e-4643.64Guanine nucleotide-binding protein G(o) subunit al... [more]
GNAZ_RAT1.123e-4645.73Guanine nucleotide-binding protein G(z) subunit al... [more]
GNAI2_CANFA1.387e-4642.80Guanine nucleotide-binding protein G(i) subunit al... [more]

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Properties
Property NameValue
Genbank descriptionC08013B10SK PhyRootSw1 Citrus sinensis cDNA clone C08013B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX301750 ID=CX301750; Name=CX301750; organism=Citrus sinensis; type=EST; length=746bp
AAACGGTTGCATTTAATATGGTATCACAAGTACAAGCAAAAGATGAATTT
GAGATGATTAAAGGTATGGATGAAAATGATGTAATTAATGTCAAAGTTGG
TGATGCCATTGATGCATTATGGAAAGATCCTGGTATTACTGCTGTCTGGA
ATCGTCGTGCTGAGTATCAGATTATTGATTCTGTGTCTTACTACTTTGAT
CGTATTAACATTATTAAAAGTCCTTCTTATATTCCTGATAAAGATGATAT
TATCCACTCACGAGTTCGTACATCAGGTATTGTCACTGAGCGTTATGTGA
TAGATAATACTATTTTCGAAATGTATGACGTTGGTGGACAACGTAATGAA
CGTAAGAAATGGATTCATTGTTTTGAAGGTGTTACTGCCGTCATTTTCGT
TGCTGCTATTTCTGAGTATGATCAAAAACTGTTTGAGGATGCTTCAACAA
ATCGTATGGTGGAAGCATTAGATTTATTTGAAGATATTTGTAATAATATT
TTCTTTTTAGAATCATCCATGATTTTATTTTTAAATAAACGCGATTTATT
TGAAAAGAAAATTAAAACAAGAAATATTCGCGATACACCAGCATTTTCTG
ATTATACTGGTAAAGATGGTGATTATGAAGCCGGTGTACAATACTTTGTT
GATAAATTTTTGGCTAAAAATAAAGTGGTTCAGATCGTCAATTTATCATC
ATGTTACTTGTGCCACCGATACAAAGACGTTCAAATTGTGTTATGC
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