CX301746

Overview
NameCX301746
Unique NameCX301746
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length679
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX301746 vs. ExPASy Swiss-Prot
Match: CDPKN_ARATH (Calcium-dependent protein kinase 23 OS=Arabidopsis thaliana GN=CPK23 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 7.097e-28
Identity = 66/213 (30.99%), Postives = 111/213 (52.11%), Query Frame = 3
Query:    9 SIEVKDLISKLLVRNMSKRYTAAQAYNHPWVQQQVEVESRDLEVDPEVIKKLGDFLESQALKKAILLYVAQQIPEKDIDHLKKLFVMIDTNGNGTLSMEEFENAFDEFQQKLNLNKQFSKEEVVNLFKAIDANNNGVIDYSEFIAVFAEHHLFKTEKYLRMVFERFDLDKNGKINQQELRKLLSGGSLVPIDQVDKILKQADTDGDGELDYEE 647
            S   KDL+ K+L  +  +R TAAQ   HPW++     E+ +  +D  V+ ++  F     LKK  L   A  + E++I  LK LF  +DTN +GT++ E+ +      + +L      S+ EV  L +A D + NG IDY EFI+     +    ++++   F+  D DKNG I + EL   +    +     + +++ + DTD DG++++EE
Sbjct:  297 SDSAKDLVEKMLTEDPKRRITAAQVLEHPWIKGG---EAPEKPIDSTVLSRMKQFRAMNKLKKLALKVSAVSLSEEEIKGLKTLFANMDTNRSGTITYEQLQTGLSRLRSRL------SETEVQQLVEASDVDGNGTIDYYEFISATMHRYKLHHDEHVHKAFQHLDKDKNGHITRDELESAMKEYGMGDEASIKEVISEVDTDNDGKINFEE 500          
BLAST of CX301746 vs. ExPASy Swiss-Prot
Match: CDPK3_ARATH (Calcium-dependent protein kinase 3 OS=Arabidopsis thaliana GN=CPK3 PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 7.097e-28
Identity = 67/216 (31.02%), Postives = 119/216 (55.09%), Query Frame = 3
Query:   21 KDLISKLLVRNMSKRYTAAQAYNHPWVQQQVEVESRDLEVDPEVIKKLGDFLESQALKKAILLYVAQQIPEKDIDHLKKLFVMIDTNGNGTLSMEEFENAFDEFQQKLNLNKQFSKEEVVNLFKAIDANNNGVIDYSEFIAVFAEHHLFKTEKYLRMVFERFDLDKNGKINQQELRKLLSGGSLVPIDQVDKILKQADTDGDGELDYEEVLVYIKQ 668
            KDL+ K+L  +   R TAA+  NHPW+++  + E+ D  +D  V+ ++  F     LKK  L  +A+ + E++I  LK++F  +DT+ NG +++EE      +   K+      S+ E+  L +A D + +G IDY EFI+     +  + E +L   F+ FD D +G I  +EL   +   ++     + +I+ + DTD DG+++YEE +  +K+
Sbjct:  310 KDLVRKMLKYDPKDRLTAAEVLNHPWIRE--DGEASDKPLDNAVLSRMKQFRAMNKLKKMALKVIAENLSEEEIIGLKEMFKSLDTDNNGIVTLEELRTGLPKLGSKI------SEAEIRQLMEAADMDGDGSIDYLEFISATMHMNRIEREDHLYTAFQFFDNDNSGYITMEELELAMKKYNMGDDKSIKEIIAEVDTDRDGKINYEEFVAMMKK 517          
BLAST of CX301746 vs. ExPASy Swiss-Prot
Match: CDPKR_ARATH (Calcium-dependent protein kinase 27 OS=Arabidopsis thaliana GN=CPK27 PE=1 SV=3)

HSP 1 Score: 123.25 bits (308), Expect = 1.211e-27
Identity = 65/207 (31.40%), Postives = 111/207 (53.62%), Query Frame = 3
Query:   27 LISKLLVRNMSKRYTAAQAYNHPWVQQQVEVESRDLEVDPEVIKKLGDFLESQALKKAILLYVAQQIPEKDIDHLKKLFVMIDTNGNGTLSMEEFENAFDEFQQKLNLNKQFSKEEVVNLFKAIDANNNGVIDYSEFIAVFAEHHLFKTEKYLRMVFERFDLDKNGKINQQELRKLLSGGSLVPIDQVDKILKQADTDGDGELDYEE 647
            L+ ++L RN  +R +AA+   HPW++   E E+ D  +D  V+ +L  F ++   KK +L ++A  + E++I  LK LF  IDT+ +G +++EE +           L    SK EV  L +A D + NG ID  EFI+     +    ++++   F+ FD D +G I ++EL   +          + +I+  ADTD DG++++EE
Sbjct:  266 LVKRMLDRNPKERISAAEVLGHPWMK---EGEASDKPIDGVVLSRLKRFRDANKFKKVVLKFIAANLSEEEIKGLKTLFTNIDTDKSGNITLEELKTGLTR------LGSNLSKTEVEQLMEAADMDGNGTIDIDEFISATMHRYKLDRDEHVYKAFQHFDKDNDGHITKEELEMAMKEDGAGDEGSIKQIIADADTDNDGKINFEE 463          
BLAST of CX301746 vs. ExPASy Swiss-Prot
Match: CDPK4_ARATH (Calcium-dependent protein kinase 4 OS=Arabidopsis thaliana GN=CPK4 PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.581e-27
Identity = 71/216 (32.87%), Postives = 119/216 (55.09%), Query Frame = 3
Query:   21 KDLISKLLVRNMSKRYTAAQAYNHPWVQQQVEVESRDLEVDPEVIKKLGDFLESQALKKAILLYVAQQIPEKDIDHLKKLFVMIDTNGNGTLSMEEFENAFDEFQQKLNLNKQFSKEEVVNLFKAIDANNNGVIDYSEFIAVFAEHHLFKTEKYLRMVFERFDLDKNGKINQQELRKLLSGGSLVPIDQVDKILKQADTDGDGELDYEEVLVYIKQ 668
            KDLI K+L R+  KR +A +A  HPW+    E  + D  +DP V+ +L  F +   +KK  L  +A+++ E++I  LK+LF MIDT+ +GT++ EE +           +  +  + E+ +L  A D +N+G IDY EF+A     +  + E+ L + F  FD D +G I   EL++  +   L     +D ++K+ D D DG++D+ E    +K+
Sbjct:  257 KDLIYKMLDRSPKKRISAHEALCHPWIVD--EHAAPDKPLDPAVLSRLKQFSQMNKIKKMALRVIAERLSEEEIGGLKELFKMIDTDNSGTITFEELKAGLK------RVGSELMESEIKSLMDAADIDNSGTIDYGEFLAATLHINKMEREENLVVAFSYFDKDGSGYITIDELQQACTEFGLCD-TPLDDMIKEIDLDNDGKIDFSEFTAMMKK 463          
BLAST of CX301746 vs. ExPASy Swiss-Prot
Match: CDPKB_ARATH (Calcium-dependent protein kinase 11 OS=Arabidopsis thaliana GN=CPK11 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.697e-27
Identity = 70/216 (32.41%), Postives = 117/216 (54.17%), Query Frame = 3
Query:   21 KDLISKLLVRNMSKRYTAAQAYNHPWVQQQVEVESRDLEVDPEVIKKLGDFLESQALKKAILLYVAQQIPEKDIDHLKKLFVMIDTNGNGTLSMEEFENAFDEFQQKLNLNKQFSKEEVVNLFKAIDANNNGVIDYSEFIAVFAEHHLFKTEKYLRMVFERFDLDKNGKINQQELRKLLSGGSLVPIDQVDKILKQADTDGDGELDYEEVLVYIKQ 668
            KDLI K+L R+  KR +A +A  HPW+    E  + D  +DP V+ +L  F +   +KK  L  +A+++ E++I  LK+LF MIDT+ +GT++ EE +           +  +  + E+ +L  A D +N+G IDY EF+A     +  + E+ L   F  FD D +G I   EL+   +   L     +D ++K+ D D DG++D+ E    +++
Sbjct:  258 KDLIYKMLERSPKKRISAHEALCHPWIVD--EQAAPDKPLDPAVLSRLKQFSQMNKIKKMALRVIAERLSEEEIGGLKELFKMIDTDNSGTITFEELKAGLK------RVGSELMESEIKSLMDAADIDNSGTIDYGEFLAATLHMNKMEREEILVAAFSDFDKDGSGYITIDELQSACTEFGLCD-TPLDDMIKEIDLDNDGKIDFSEFTAMMRK 464          
BLAST of CX301746 vs. ExPASy Swiss-Prot
Match: CDPK2_PLAFK (Calcium-dependent protein kinase 2 OS=Plasmodium falciparum (isolate K1 / Thailand) GN=CPK2 PE=2 SV=3)

HSP 1 Score: 120.939 bits (302), Expect = 6.008e-27
Identity = 64/225 (28.44%), Postives = 130/225 (57.78%), Query Frame = 3
Query:    9 SIEVKDLISKLLVRNMSKRYTAAQAYNHPWVQQQVEVESRDLEVDPEVIKKLGDFLESQALKKAILLYVAQQIPEKDIDHLKKLFVMIDTNGNGTLSMEEFENAFDEFQQKLNLNKQFSKEEVVNLFKAIDANNNGVIDYSEFIAVFAEHHLFKTEKYLRMVFERFDLDKNGKINQQELRKLLSGGSLVP--IDQ-VDKILKQADTDGDGELDYEEVLVYIKQSR 674
            S + K+LI+KLL  N ++R T  +A NHPW+ Q  +     +E+   ++K L +F +   LKK  L  +A+ + + +I++L+ +F+ +D + +GTLS +E  +   +      +  Q    ++  + + ID+N +G I Y++F+A   +   +  ++   + F+ FD+D NGKI+ +EL+++     +    ID+ +D +L++ D +GDGE+D+ E ++ + + +
Sbjct:  296 SSDAKNLITKLLTYNPNERCTIEEALNHPWITQMTKSHEH-VELSSTLLKNLKNFKKENELKKIALTIIAKHLCDVEINNLRNIFIALDVDNSGTLSSQEILDGLKK------IGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDKQTYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMMSKKK 513          
BLAST of CX301746 vs. ExPASy Swiss-Prot
Match: CDPK1_ARATH (Calcium-dependent protein kinase 1 OS=Arabidopsis thaliana GN=CPK1 PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.338e-26
Identity = 69/220 (31.36%), Postives = 117/220 (53.18%), Query Frame = 3
Query:    9 SIEVKDLISKLLVRNMSKRYTAAQAYNHPWVQQQVEVESRDLEVDPEVIKKLGDFLESQALKKAILLYVAQQIPEKDIDHLKKLFVMIDTNGNGTLSMEEFENAFDEFQQKLNLNKQFSKEEVVNLFKAIDANNNGVIDYSEFIAVFAEHHLFKTEKYLRMVFERFDLDKNGKINQQELRKLLSGGSLVPIDQVDKILKQADTDGDGELDYEEVLVYIKQ 668
            S   KDL+ K+LVR+  KR TA Q   HPWVQ  V+  + D  +D  V+ ++  F      KK  L  +A+ + E++I  LK++F MID + +G ++ EE +         L       + E+++L +A D +N+G IDY EFIA     +  + E +L   F  FD D +G I   EL++      +  + +++++++  D D DG +DY E +  +++
Sbjct:  378 SESAKDLVRKMLVRDPKKRLTAHQVLCHPWVQ--VDGVAPDKPLDSAVLSRMKQFSAMNKFKKMALRVIAESLSEEEIAGLKEMFNMIDADKSGQITFEELKAGLKRVGANLK------ESEILDLMQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFGVEDV-RIEELMRDVDQDNDGRIDYNEFVAMMQK 588          
BLAST of CX301746 vs. ExPASy Swiss-Prot
Match: CDPK9_ARATH (Calcium-dependent protein kinase 9 OS=Arabidopsis thaliana GN=CPK9 PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.748e-26
Identity = 67/213 (31.46%), Postives = 106/213 (49.77%), Query Frame = 3
Query:    9 SIEVKDLISKLLVRNMSKRYTAAQAYNHPWVQQQVEVESRDLEVDPEVIKKLGDFLESQALKKAILLYVAQQIPEKDIDHLKKLFVMIDTNGNGTLSMEEFENAFDEFQQKLNLNKQFSKEEVVNLFKAIDANNNGVIDYSEFIAVFAEHHLFKTEKYLRMVFERFDLDKNGKINQQELRKLLSGGSLVPIDQVDKILKQADTDGDGELDYEE 647
            S   KDL+ ++L  +  +R +AA    HPW+++  E    D  +D  V+ ++  F     LKK  L  +A+ I  ++I  LK +F  IDT+ +GT++ EE +    +   KL      ++ EV  L  A D + NG IDY EFI      H  ++ + L   F+ FD D +G I   EL   L    +     + ++L   D+D DG ++YEE
Sbjct:  319 SSSAKDLVRRMLTADPKRRISAADVLQHPWLREGGEAS--DKPIDSAVLSRMKQFRAMNKLKKLALKVIAENIDTEEIQGLKAMFANIDTDNSGTITYEELKEGLAKLGSKL------TEAEVKQLMDAADVDGNGSIDYIEFITATMHRHRLESNENLYKAFQHFDKDSSGYITIDELESALKEYGMGDDATIKEVLSDVDSDNDGRINYEE 523          
BLAST of CX301746 vs. ExPASy Swiss-Prot
Match: CDPKJ_ARATH (Calcium-dependent protein kinase 19 OS=Arabidopsis thaliana GN=CPK19 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.982e-26
Identity = 63/213 (29.58%), Postives = 112/213 (52.58%), Query Frame = 3
Query:    9 SIEVKDLISKLLVRNMSKRYTAAQAYNHPWVQQQVEVESRDLEVDPEVIKKLGDFLESQALKKAILLYVAQQIPEKDIDHLKKLFVMIDTNGNGTLSMEEFENAFDEFQQKLNLNKQFSKEEVVNLFKAIDANNNGVIDYSEFIAVFAEHHLFKTEKYLRMVFERFDLDKNGKINQQELRKLLSGGSLVPIDQVDKILKQADTDGDGELDYEE 647
            S   KDL+  +L  +  KR+TAAQ   HPW+++  E    D  +D  V+ ++        LKK    ++AQ + E+++  LK +F  +DT+ +GT++ +E ++  ++      L  + ++ EV  L +  D + NG IDY EFI+        + E  L   F+ FD D +G I++QEL   +   ++     + +I+ + D D DG ++Y+E
Sbjct:  327 SESAKDLVRNMLKYDPKKRFTAAQVLEHPWIREGGEAS--DKPIDSAVLSRMKQLRAMNKLKKLAFKFIAQNLKEEELKGLKTMFANMDTDKSGTITYDELKSGLEK------LGSRLTETEVKQLLEDADVDGNGTIDYIEFISATMNRFRVEREDNLFKAFQHFDKDNSGFISRQELETAMKEYNMGDDIMIKEIISEVDADNDGSINYQE 531          
BLAST of CX301746 vs. ExPASy Swiss-Prot
Match: CDPKC_ARATH (Calcium-dependent protein kinase 12 OS=Arabidopsis thaliana GN=CPK12 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.894e-26
Identity = 70/220 (31.82%), Postives = 117/220 (53.18%), Query Frame = 3
Query:    9 SIEVKDLISKLLVRNMSKRYTAAQAYNHPWVQQQVEVESRDLEVDPEVIKKLGDFLESQALKKAILLYVAQQIPEKDIDHLKKLFVMIDTNGNGTLSMEEFENAFDEFQQKLNLNKQFSKEEVVNLFKAIDANNNGVIDYSEFIAVFAEHHLFKTEKYLRMVFERFDLDKNGKINQQELRKLLSGGSLVPIDQVDKILKQADTDGDGELDYEEVLVYIKQ 668
            S   KDLI K+L  N  KR TA Q   HPW+    +  + D  +D  V+ +L  F     LKK  L  +A+++ E++I  LK+LF MIDT+ +GT++ EE +++         +  +  + E+  L +A D + +G IDY EF+A     +  + E+ L   F  FD D +G I  +EL++       +    +D+++K  D D DG++DY E +  +++
Sbjct:  250 SESAKDLIKKMLESNPKKRLTAHQVLCHPWIVD--DKVAPDKPLDCAVVSRLKKFSAMNKLKKMALRVIAERLSEEEIGGLKELFKMIDTDKSGTITFEELKDSM------RRVGSELMESEIQELLRAADVDESGTIDYGEFLAATIHLNKLEREENLVAAFSFFDKDASGYITIEELQQAWKEFG-INDSNLDEMIKDIDQDNDGQIDYGEFVAMMRK 460          
The following BLAST results are available for this feature:
BLAST of CX301746 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 206
Match NameE-valueIdentityDescription
CDPKN_ARATH7.097e-2830.99Calcium-dependent protein kinase 23 OS=Arabidopsis... [more]
CDPK3_ARATH7.097e-2831.02Calcium-dependent protein kinase 3 OS=Arabidopsis ... [more]
CDPKR_ARATH1.211e-2731.40Calcium-dependent protein kinase 27 OS=Arabidopsis... [more]
CDPK4_ARATH1.581e-2732.87Calcium-dependent protein kinase 4 OS=Arabidopsis ... [more]
CDPKB_ARATH2.697e-2732.41Calcium-dependent protein kinase 11 OS=Arabidopsis... [more]
CDPK2_PLAFK6.008e-2728.44Calcium-dependent protein kinase 2 OS=Plasmodium f... [more]
CDPK1_ARATH1.338e-2631.36Calcium-dependent protein kinase 1 OS=Arabidopsis ... [more]
CDPK9_ARATH1.748e-2631.46Calcium-dependent protein kinase 9 OS=Arabidopsis ... [more]
CDPKJ_ARATH2.982e-2629.58Calcium-dependent protein kinase 19 OS=Arabidopsis... [more]
CDPKC_ARATH3.894e-2631.82Calcium-dependent protein kinase 12 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionC08013B06SK PhyRootSw1 Citrus sinensis cDNA clone C08013B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX301746 ID=CX301746; Name=CX301746; organism=Citrus sinensis; type=EST; length=679bp
AAAGATGCAGTATTGAGGTGAAGGATTTGATTTCCAAGCTTTTGGTTAGA
AATATGTCCAAGAGATACACCGCCGCACAAGCATATAACCATCCTTGGGT
CCAACAACAAGTCGAAGTTGAAAGCAGAGATCTTGAAGTTGATCCTGAAG
TTATTAAAAAACTCGGTGATTTCTTGGAAAGTCAAGCATTGAAGAAAGCA
ATTTTATTATATGTTGCTCAACAAATTCCTGAAAAAGACATCGACCATTT
GAAAAAGCTGTTTGTGATGATTGATACAAATGGTAACGGAACATTGTCAA
TGGAAGAATTTGAGAATGCATTTGATGAATTCCAGCAAAAACTCAACTTA
AACAAGCAATTTTCAAAAGAAGAAGTTGTCAACCTCTTCAAGGCCATCGA
TGCCAATAACAACGGCGTTATTGATTATTCTGAATTTATCGCTGTCTTTG
CTGAACATCATCTCTTTAAAACTGAAAAATATCTTCGTATGGTCTTTGAA
CGTTTCGATTTGGATAAAAATGGAAAGATTAATCAACAAGAACTTAGAAA
ATTACTGAGCGGAGGAAGTTTGGTGCCAATCGATCAAGTTGATAAAATCC
TTAAACAAGCTGATACTGATGGTGATGGAGAGTTGGATTACGAAGAAGTC
TTGGTTTATATCAAGCAATCCAGAACTTG
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