CX301740
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX301740 vs. ExPASy Swiss-Prot
Match: HS166_ORYSJ (16.6 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP16.6 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 2.715e-29 Identity = 70/132 (53.03%), Postives = 83/132 (62.88%), Query Frame = 3 Query: 9 NVFDPFSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEE--KND-KWHRVERSSGKFLRRFRLPDNAKVEQVKASKENGVQTVTVP 395 NV DP S+D W D F + S A N R+DWKETP AHVF ADLPG+R G +L ISGER++E++ KND +WH VERSSGKF RRFRLP A+V+QV AS +NGV TVTVP Sbjct: 8 NVLDPMSVDFWADADPFGA-----VRSLAERCPVLTNVRVDWKETPTAHVFTADLPGVRKDQAKVEVEDGGVLVISGERAREEDVDGKNDERWHHVERSSGKFQRRFRLPRGARVDQVSASMDNGVLTVTVP 134
BLAST of CX301740 vs. ExPASy Swiss-Prot
Match: HS189_ORYSJ (18.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.9 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.821e-25 Identity = 57/128 (44.53%), Postives = 83/128 (64.84%), Query Frame = 3 Query: 18 DPFSLDVWDPF-DGFLSSALTNAPSSARETSQF-ANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASKENGVQTVTVP 395 +P S+D+ +PF D +A APS+A + + A +DWKET AHVF AD+PG+R ++L+ISG+R++ EEK ++WHRVERSS +F+R RLP NA + V A+ +NGV T+T+P Sbjct: 34 EPVSVDIMEPFMDAISLTAFAAAPSAAAAAAGVPSTASMDWKETAAAHVFMADMPGVRREEVRVEVEEEKVLRISGQRARAAEEKGERWHRVERSSERFVRTVRLPPNANTDGVHAALDNGVLTITIP 161
BLAST of CX301740 vs. ExPASy Swiss-Prot
Match: HSP41_SOYBN (22.0 kDa class IV heat shock protein OS=Glycine max GN=HSP22.0 PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.014e-24 Identity = 50/91 (54.95%), Postives = 64/91 (70.33%), Query Frame = 3 Query: 120 ARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASKENGVQTVTV 392 AR+DWKETP+ HV D+PGL+ R+L++SGER KE+E+K D WHRVERS GKF R+FRLP N ++ VKA ENGV T+T+ Sbjct: 67 ARVDWKETPEGHVIMLDVPGLKREEIKVEVEENRVLRVSGERKKEEEKKGDHWHRVERSYGKFWRQFRLPQNVDLDSVKAKLENGVLTLTL 157
BLAST of CX301740 vs. ExPASy Swiss-Prot
Match: HSP41_PEA (22.7 kDa class IV heat shock protein OS=Pisum sativum GN=HSP22.7 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 3.435e-24 Identity = 48/93 (51.61%), Postives = 66/93 (70.97%), Query Frame = 3 Query: 114 ANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASKENGVQTVTV 392 ++AR+DWKETP+ HV D+PGL+ R+L++SGER KE+++K D WHRVERS GKF R+F+LP N ++ VKA ENGV T+T+ Sbjct: 73 SHARVDWKETPEGHVIMVDVPGLKKDDIKIEVEENRVLRVSGERKKEEDKKGDHWHRVERSYGKFWRQFKLPQNVDLDSVKAKMENGVLTLTL 165
BLAST of CX301740 vs. ExPASy Swiss-Prot
Match: HSP22_ARATH (22.0 kDa heat shock protein OS=Arabidopsis thaliana GN=HSP22.0 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.443e-22 Identity = 49/100 (49.00%), Postives = 67/100 (67.00%), Query Frame = 3 Query: 96 RETS-QFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASKENGVQTVTV 392 R+TS + AR+DWKET + H D+PGL+ +L++SGER +E+E+K D+WHRVERS GKF R+F+LPDN +E VKA ENGV T+ + Sbjct: 62 RDTSVALSPARVDWKETAEGHEIMLDIPGLKKDEVKIEVEENGVLRVSGERKREEEKKGDQWHRVERSYGKFWRQFKLPDNVDMESVKAKLENGVLTINL 161
BLAST of CX301740 vs. ExPASy Swiss-Prot
Match: HS17B_ORYSJ (17.9 kDa heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP17.9B PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 4.199e-22 Identity = 56/129 (43.41%), Postives = 80/129 (62.02%), Query Frame = 3 Query: 12 VFDPFSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLP-GLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASKENGVQTVTVP 395 +FD + D W+PF F ++ +A A +TS FAN I+ +ET +A+VF+ADLP G++ G +L I+GERS +EEK + H +ERS F RF LPD+A V+ V+AS + G+ TVTVP Sbjct: 6 LFDTLAFDAWNPFSIFGTTVAADA-WLASDTSAFANTYIESRETAEAYVFRADLPAGVKKEEVRVEVDEGNVLVITGERSVRREEKGQRSHHIERSCATFFGRFHLPDDAVVDLVRASMDGGMLTVTVP 133
BLAST of CX301740 vs. ExPASy Swiss-Prot
Match: HSP12_SOYBN (Class I heat shock protein (Fragment) OS=Glycine max GN=HSP6834-A PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 3.555e-21 Identity = 48/58 (82.76%), Postives = 53/58 (91.38%), Query Frame = 3 Query: 222 ILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASKENGVQTVTVP 395 ILQISGER+ E+E+KND WHRVERSSGKF+R FRLPDNAKV+QVKAS ENGV TVTVP Sbjct: 1 ILQISGERNVEKEDKNDTWHRVERSSGKFMRSFRLPDNAKVDQVKASMENGVLTVTVP 58
BLAST of CX301740 vs. ExPASy Swiss-Prot
Match: HS219_ORYSJ (21.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP21.9 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.675e-19 Identity = 51/113 (45.13%), Postives = 72/113 (63.72%), Query Frame = 3 Query: 81 APSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXG-RILQISGER-----SKEQEEKND--KWHRVERSSGKFLRRFRLPDNAKVEQVKASKENGVQTVTVP 395 A ++A E + A AR DWKETP+AHV D+PG+R R+L++SGER ++E+E + D +WHR ER++G+F RRFR+P A V +V A ++GV TVTVP Sbjct: 59 AAAAAGEPAAVALARCDWKETPEAHVVTVDVPGVRRGDVRVEVDEASRVLRVSGERRRAGAAEEEEGERDGVRWHRAERAAGRFWRRFRMPPGADVGRVAARLDDGVLTVTVP 171
BLAST of CX301740 vs. ExPASy Swiss-Prot
Match: HS232_ORYSJ (23.2 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP23.2 PE=2 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 6.275e-18 Identity = 45/100 (45.00%), Postives = 63/100 (63.00%), Query Frame = 3 Query: 99 ETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQ--EEKN--DKWHRVERSSGKFLRRFRLPDNAKVEQVKASKENGVQTV 386 + + + AR+DW+ET AH D+PG+R R+L+ISGER +E+ E+K D WHR ERS G+F R+ RLPDNA ++ + AS +NGV TV Sbjct: 69 DVAMLSMARVDWRETGDAHEVVVDVPGMRKEDLRVEVEDNRVLRISGERRREETTEQKGGGDHWHREERSYGRFWRQLRLPDNADLDSIAASLDNGVLTV 168
BLAST of CX301740 vs. ExPASy Swiss-Prot
Match: HS157_ARATH (15.7 kDa heat shock protein, peroxisomal OS=Arabidopsis thaliana GN=HSP15.7 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.636e-16 Identity = 43/99 (43.43%), Postives = 58/99 (58.59%), Query Frame = 3 Query: 114 ANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSS-----GKFLRRFRLPDNAKVEQVKASKENGVQTVTVP 395 + A IDW E+ +H+FK ++PG G +L I GE KE++++N WH ER + +FLRR LP+N KV+QVKA ENGV TV VP Sbjct: 20 STALIDWMESNNSHIFKINVPGYNKEDIKVQIEEGNVLSIRGEGIKEEKKENLVWHVAEREAFSGGGSEFLRRIELPENVKVDQVKAYVENGVLTVVVP 118 The following BLAST results are available for this feature:
BLAST of CX301740 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CX301740 ID=CX301740; Name=CX301740; organism=Citrus sinensis; type=EST; length=397bpback to top |