CX301628

Overview
NameCX301628
Unique NameCX301628
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length744
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX301628 vs. ExPASy Swiss-Prot
Match: GTR3_RABIT (Solute carrier family 2, facilitated glucose transporter member 3 (Fragment) OS=Oryctolagus cuniculus GN=SLC2A3 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.014e-17
Identity = 62/228 (27.19%), Postives = 115/228 (50.44%), Query Frame = 1
Query:   70 DTPNSLIERGRFEEGKAVLR---KIRGTDKIEPEFLELVEAS-RIAKEVKHPFRNLLKRRN-RPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSCS 738
            ++P  L+     +E K +L+   ++ GT  +  +  E+ E S R+ +E +     L +  + R  ++I++ LQ+ QQ +GINA+ +Y+  +FK  G      +Y+T+  G VN + T+VS++ V++ GRR L L     M L   ++ + L +K K      +   +++ +  I  + + F    GP+ WLI +  F  + R A  +V  C N    F++   F S +
Sbjct:  110 ESPRFLLINKEEDEAKQILQILQRLWGTQDVAQDIQEMKEESARMRQEKQVTVLELFRAPSYRQPIIISIVLQLSQQLSGINAVFYYSTGIFKDAGV--REPIYATIGAGVVNTIFTIVSVFLVERAGRRTLHLIGLGGMALCSVLMTVSLLLKXK------YDTMSLVCIAAILIYAAFFEIGPGPIPWLIVTGLFSQDPRPAAMAVAGCSNWTSNFLVGLLFPSAA 329          
BLAST of CX301628 vs. ExPASy Swiss-Prot
Match: GTR1_RAT (Solute carrier family 2, facilitated glucose transporter member 1 OS=Rattus norvegicus GN=Slc2a1 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.014e-17
Identity = 66/216 (30.56%), Postives = 106/216 (49.07%), Query Frame = 1
Query:   85 LIERGRFEEGKAVLRKIRGTDKIEPEFLELVEASR-IAKEVKHPFRNLLKR-RNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAF 726
            LI R      K+VL+K+RGT  +  +  E+ E  R + +E K     L +    R  ++IAV LQ+ QQ +GINA+ +Y+  +F+  G      +Y+T+ +G VN   T+VS++ V++ GRR L L     M     ++ I L +      E L    + L ++ I  F++ F    GP+ W I +E F    R A  +V    N    F++   F
Sbjct:  215 LINRNEENRAKSVLKKLRGTADVTRDLQEMKEEGRQMMREKKVTILELFRSPAYRQPILIAVVLQLSQQLSGINAVFYYSTSIFEKAGV--QQPVYATIGSGIVNTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAVLMTIALAL-----LEQL-PWMSYLSIVAIFGFVAFFEVGPGPIPWFIVAELFSQGPRPAAVAVAGFSNWTSNFIVGMCF 422          
BLAST of CX301628 vs. ExPASy Swiss-Prot
Match: GHT4_SCHPO (High-affinity hexose transporter ght4 OS=Schizosaccharomyces pombe GN=ght4 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 3.014e-17
Identity = 70/249 (28.11%), Postives = 122/249 (49.00%), Query Frame = 1
Query:   19 RAEFGTRLL-----TVGSLLVTDTPNSLIERGRFEEGKAVLRKIRGTDKIEPEFLELVEA------SRIAKEV---KHPFRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKV--KDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIA 717
            R  FG  +L      VG L + ++P  LI +GR EE    LR +  T +++PE  E+++       S I  E+   K  +  +  +  R + V+     + ++  G N   +YA  +FK  G G +      VI GA+N  +T  ++Y++D +GRR  L+       +   + A +   K+  K+ + D   G   ++++  C F+ ++  SWGP+GW+I  ETFP+  RS   +V    N L  F+++
Sbjct:  179 RTSFGINILWGIFLMVGVLFLPESPRYLIYKGRDEEA---LRIMCQTAELDPES-EIIQTNFNTIKSDIEMEMAGGKARWPEVFGKEVRYRTVLGFLTMLLRELIGNNYYFYYATQVFK--GTGMTDIFLPAVILGAINFGTTFGALYTIDNLGRRNPLIFGAAFQSICFFIYAAVGDRKLIYKNGTSDHRAG--AVMIVFSCLFLFSYCCSWGPMGWVIVGETFPIRYRSKCAAVATSGNWLGNFMVS 419          
BLAST of CX301628 vs. ExPASy Swiss-Prot
Match: ERDL4_ARATH (Sugar transporter ERD6-like 4 OS=Arabidopsis thaliana GN=At1g19450 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.014e-17
Identity = 58/228 (25.44%), Postives = 119/228 (52.19%), Query Frame = 1
Query:   40 LLTVGSLLVTDTPNSLIERGRFEEGKAVLRKIRGTDK-IEPEFLELVEA-SRIAKEVKHPFRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIK-VKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVI 714
            LL  G   + ++P  L + G  ++ +  L+ +RG +  I  E  E+  + +  +K     F +L +RR    L++ + L   QQ  GIN ++FY+  +F++ G   ++S  +T   G V V++T ++ + VDK GRR+LL+ + I M +S  ++A+   +K       +++   +++ V+ +   + + +   GP+ WLI SE  P+  +    S+   +N   ++++
Sbjct:  213 LLIPGLFFIPESPRWLAKMGLTDDFETSLQVLRGFETDITVEVNEIKRSVASSSKRSAVRFVDLKRRRYYFPLMVGIGLLALQQLGGINGVLFYSSTIFESAGV--TSSNVATFGVGVVQVVATGIATWLVDKAGRRLLLMISSIGMTISLVIVAVAFYLKEFVSPDSNMYNILSMVSVVGVVAMVISCSLGMGPIPWLIMSEILPVNIKGLAGSIATLLNWFVSWLV 438          
BLAST of CX301628 vs. ExPASy Swiss-Prot
Match: GTR2_RAT (Solute carrier family 2, facilitated glucose transporter member 2 OS=Rattus norvegicus GN=Slc2a2 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.937e-17
Identity = 63/206 (30.58%), Postives = 102/206 (49.51%), Query Frame = 1
Query:  115 KAVLRKIRGTDKIEPEFLEL-VEASRIAKEVKHPFRNLLKRRN-RPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAF 726
            K  L+++RGT+ I  +  E+  E    + E K     L    N R  +V+A+ L + QQ +GIN I +Y+  +F+T G   S  +Y+T+  GA+N++ T VS+  V+K GRR L L   I MF     +++ L +       D  T  + + +  I  F+S F    GP+ W + +E F    R    ++    N +  F+IA  F
Sbjct:  255 KKSLKRLRGTEDITKDINEMRKEKEEASTEQKVSVIQLFTDPNYRQPIVVALMLHLAQQFSGINGIFYYSTSIFQTAGI--SQPVYATIGVGAINMIFTAVSVLLVEKAGRRTLFLAGMIGMFFCAVFMSLGLVLL------DKFTWMSYVSMTAIFLFVSFFEIGPGPIPWFMVAEFFSQGPRPTALALAAFSNWVCNFIIALCF 452          
BLAST of CX301628 vs. ExPASy Swiss-Prot
Match: EDL16_ARATH (Sugar transporter ERD6-like 16 OS=Arabidopsis thaliana GN=At5g18840 PE=2 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 3.937e-17
Identity = 63/231 (27.27%), Postives = 113/231 (48.92%), Query Frame = 1
Query:   40 LLTVGSLLVTDTPNSLIERGRFEEGKAVLRKIRGTDKIEPEFLELVEASRIAKEV--KHPFRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAF 726
            +L  G   + ++P  L + G  +E +  L+K+RG D       + ++ S  A E+  K   ++L+ ++    ++I V+L +FQQ  GIN I FYA   F   GF  ++    T+    V V  T++    +DK GRR L++ +   +FL   +      +K +    +     AV  V++   +++AF+   GP+ W+I SE FP+  +    S+ V VN    + ++  F
Sbjct:  208 VLLFGLCFIPESPRWLAKAGHEKEFRVALQKLRGKDADITNEADGIQVSIQALEILPKARIQDLVSKKYGRSVIIGVSLMVFQQFVGINGIGFYASETFVKAGF--TSGKLGTIAIACVQVPITVLGTILIDKSGRRPLIMISAGGIFLGCILTGTSFLLKGQSLLLEWVPSLAVGGVLI---YVAAFSIGMGPVPWVIMSEIFPINVKGIAGSLVVLVNWSGAWAVSYTF 433          
BLAST of CX301628 vs. ExPASy Swiss-Prot
Match: XYLL1_ARATH (D-xylose-proton symporter-like 1 OS=Arabidopsis thaliana GN=At3g03090 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.142e-17
Identity = 57/186 (30.65%), Postives = 95/186 (51.08%), Query Frame = 1
Query:  172 LVEASRIAKEVKHPFRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYS-TVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAF 726
            L E S + ++ +  F  L + +    L IA  L +FQQ TG  ++++YAP + +T GF  +A     +++ G + ++ T VS+  +D+VGRR LLL     M +S      +LG          +     + V  +  ++  +  S+GP+GWL+ SE FPL+ R  G S+ V VN     ++  AF
Sbjct:  280 LAELSLVGEDKEATFGELFRGKCLKALTIAGGLVLFQQITGQPSVLYYAPSILQTAGFSAAADATRISILLGLLKLVMTGVSVIVIDRVGRRPLLLCGVSGMVIS----LFLLGSYYM-----FYKNVPAVAVAALLLYVGCYQLSFGPIGWLMISEIFPLKLRGRGISLAVLVNFGANALVTFAF 456          
BLAST of CX301628 vs. ExPASy Swiss-Prot
Match: GTR1_MOUSE (Solute carrier family 2, facilitated glucose transporter member 1 OS=Mus musculus GN=Slc2a1 PE=1 SV=3)

HSP 1 Score: 88.1965 bits (217), Expect = 5.142e-17
Identity = 64/216 (29.63%), Postives = 105/216 (48.61%), Query Frame = 1
Query:   85 LIERGRFEEGKAVLRKIRGTDKIEPEFLELVEASR-IAKEVKHPFRNLLKR-RNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAF 726
            LI R      K+VL+K+RGT  +  +  E+ E  R + +E K     L +    R  ++IAV LQ+ QQ +GINA+ +Y+  +F+  G      +Y+T+ +G VN   T+VS++ V++ GRR L L     M     ++ I L +       +     + L ++ I  F++ F    GP+ W I +E F    R A  +V    N    F++   F
Sbjct:  215 LINRNEENRAKSVLKKLRGTADVTRDLQEMKEEGRQMMREKKVTILELFRSPAYRQPILIAVVLQLSQQLSGINAVFYYSTSIFEKAGV--QQPVYATIGSGIVNTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAVLMTIALALL------ERLPWMSYLSIVAIFGFVAFFEVGPGPIPWFIVAELFSQGPRPAAIAVAGFSNWTSNFIVGMCF 422          
BLAST of CX301628 vs. ExPASy Swiss-Prot
Match: QAY_NEUTR (Quinate permease OS=Neurospora terricola GN=qa-y PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.715e-17
Identity = 70/242 (28.93%), Postives = 117/242 (48.35%), Query Frame = 1
Query:   40 LLTVGSLLVTDTPNSLIERGRFEEGKAVL---RKIRGTDKIEPEFLELVEAS--RIAKEVKH----PFRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGF-GGSASLYSTVITGAVNVLSTLV-SIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGI----KVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQ 720
            LL +GS  + ++P  L   G+ EE   VL   R +  TD+   E +  ++A   R A+EV      PF +L +R+ + +  +   L ++Q  +GINAI +Y+P +F+++G  G +    +T I G V ++ T+V  ++ VD VGRR +L        L    I   + I      K     L +G  +  +     + + +  SW    W+I SE F   TRS GQ+     N  + F+I++
Sbjct:  207 LLFLGSFWIPESPRWLFANGKREEAMKVLCWMRNLEPTDRYIVEEVSYIDADLERYAREVGKGFWKPFLSLKQRKVQWRFFLGGMLFLWQNGSGINAINYYSPTVFRSIGITGTNTGFLTTGIFGVVKMVLTIVWLLWLVDLVGRRRMLFIGATGGSLCMWFIGAYIKIAGPGSTKAEDAKLTSG-GIAAIFFFYLWTAFYTPSWNGTPWVINSEMFDQNTRSLGQASAAANNWFWNFIISR 447          
BLAST of CX301628 vs. ExPASy Swiss-Prot
Match: GHT3_SCHPO (High-affinity gluconate transporter ght3 OS=Schizosaccharomyces pombe GN=ght3 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.715e-17
Identity = 67/237 (28.27%), Postives = 118/237 (49.79%), Query Frame = 1
Query:   40 LLTVGSLLVTDTPNSLIERGRFEEGKAVLRKIRGTDKIEPEFLELVEAS--RIAKEV-------KHPFRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKV--KDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIA 717
            LL VG L + ++P  LI +GR EE    LR +    ++ PE  E+++ +   I  ++       K  +  +  +  R +  +   + +F++  G N   +YA  +FK  G G +      VI GA+N  +T  ++Y++D +GRR  L+       +   + A +   K+  K+ + D   G   ++++  C F+ ++  SWGP+GW+I  ETFP+  RS   SV    N L  F+I+
Sbjct:  191 LLMVGVLFLPESPRYLIYKGRDEEA---LRIMCNMAELSPES-EIIQTNFNTIKSDIEIEMAGGKARWIEIFGKDIRYRTCLGFLVMLFRELIGNNYYFYYATQVFK--GTGMTDIFLPAVILGAINFGTTFGALYTIDNLGRRNPLIFGAAFQSICFFIYAAVGDRKLIYKNGTSDHRAGS--VMIVFSCLFLFSYCCSWGPMGWVIVGETFPIRYRSKCASVATSGNWLGNFMIS 419          
The following BLAST results are available for this feature:
BLAST of CX301628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 158
Match NameE-valueIdentityDescription
GTR3_RABIT3.014e-1727.19Solute carrier family 2, facilitated glucose trans... [more]
GTR1_RAT3.014e-1730.56Solute carrier family 2, facilitated glucose trans... [more]
GHT4_SCHPO3.014e-1728.11High-affinity hexose transporter ght4 OS=Schizosac... [more]
ERDL4_ARATH3.014e-1725.44Sugar transporter ERD6-like 4 OS=Arabidopsis thali... [more]
GTR2_RAT3.937e-1730.58Solute carrier family 2, facilitated glucose trans... [more]
EDL16_ARATH3.937e-1727.27Sugar transporter ERD6-like 16 OS=Arabidopsis thal... [more]
XYLL1_ARATH5.142e-1730.65D-xylose-proton symporter-like 1 OS=Arabidopsis th... [more]
GTR1_MOUSE5.142e-1729.63Solute carrier family 2, facilitated glucose trans... [more]
QAY_NEUTR6.715e-1728.93Quinate permease OS=Neurospora terricola GN=qa-y P... [more]
GHT3_SCHPO6.715e-1728.27High-affinity gluconate transporter ght3 OS=Schizo... [more]

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Properties
Property NameValue
Genbank descriptionC08011G12SK PhyRootSw1 Citrus sinensis cDNA clone C08011G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX301628 ID=CX301628; Name=CX301628; organism=Citrus sinensis; type=EST; length=744bp
GAATTCGGCACGAGGCCTCGTGCCGAATTCGGCACGAGGCTCCTGACCGT
GGGATCCCTCCTGGTGACAGACACTCCTAATAGTCTTATTGAACGCGGTC
GTTTCGAAGAAGGGAAGGCCGTGCTCAGAAAGATTAGGGGCACTGACAAG
ATTGAACCTGAGTTCTTGGAGCTTGTTGAGGCTAGTCGTATAGCCAAAGA
AGTAAAGCACCCTTTCAGAAATCTGCTCAAGCGTAGGAACCGGCCCCAGC
TTGTCATTGCTGTTGCCTTGCAGATCTTCCAGCAGTGTACAGGAATCAAT
GCGATCATGTTTTATGCCCCAGTCCTGTTTAAAACGTTGGGATTTGGCGG
CAGTGCTTCTCTTTACTCAACTGTGATTACAGGGGCAGTTAACGTCCTCT
CAACACTAGTATCAATCTACTCGGTGGACAAAGTGGGACGTCGGATGCTA
TTACTCGAAGCTGGAATTCAAATGTTCTTGTCTCAGACTGTGATAGCAAT
CATACTTGGAATTAAGGTTAAGGATCACTCGGAAGATTTACACACTGGCT
TTGCCGTCCTAGTGGTTATTATGATTTGCACTTTCATCTCTGCCTTTGCT
TGGTCTTGGGGACCTCTCGGATGGCTGATTCCCAGCGAAACATTCCCGTT
AGAGACGCGATCAGCTGGACAGAGTGTTACTGTTTGTGTGAACTTGCTGT
TCACTTTTGTGATAGCTCAAGCATTCCTTTCATGCTCTGCCATT
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