CX301616
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX301616 vs. ExPASy Swiss-Prot
Match: GL814_ORYSJ (Germin-like protein 8-14 OS=Oryza sativa subsp. japonica GN=GER5 PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.404e-23 Identity = 60/163 (36.81%), Postives = 89/163 (54.60%), Query Frame = 3 Query: 141 QDVCLADLNAPISINGFPCKPASEVTSDDFFTDFSKNPTTFDVFKRAVTLGDVSGFPAVNTQGVSLFRIDLDVGGINPPHTHPRGTEAGIVTRGKVLVGLVT-TNNTFFSKVLTPGMVFLIPRALIHFQLNVGKGPATFIPIFNTQNPGVSDSLTTLFDTTPP 626 QD C+ADL + G+PCK AS D + + T ++ K AVT V FP VN G+S R+D+ VGG+ P HTHP +E VT+G V G +T ++NT +++ L G + + P+ L+H+Q N G+ A + F+ NPG+ + LF P Sbjct: 26 QDFCVADLTCSDTPAGYPCK-ASVGAGDFAYHGLAAAGNTSNLIKAAVTPAFVGQFPGVNGLGISAARLDIAVGGVVPLHTHPAASELLFVTQGTVAAGFITSSSNTVYTRTLYAGDIMVFPQGLLHYQYNAGQSAAVALVAFSGPNPGLQITDYALFANNLP 187
BLAST of CX301616 vs. ExPASy Swiss-Prot
Match: GL31_ARATH (Germin-like protein subfamily 3 member 1 OS=Arabidopsis thaliana GN=GLP1 PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.572e-22 Identity = 57/164 (34.76%), Postives = 86/164 (52.44%), Query Frame = 3 Query: 138 LQDVCLADLNAPISINGFPCKPASEVTSDDF-FTDFSKNPTTFDVFKRAVTLGDVSGFPAVNTQGVSLFRIDLDVGGINPPHTHPRGTEAGIVTRGKVLVGLVTTNNTFFSKVLTPGMVFLIPRALIHFQLNVGKGPATFIPIFNTQNPGVSDSLTTLFDTTPP 626 +QD C+A+L + G+PC V + DF F+ T ++ AVT + FP +N G+S R+DL G+ P HTHP +E V G + G V++ N + + L PG V + P+ L+HFQ+N GK A+ + FN+ NPG+ LF + P Sbjct: 19 VQDFCVANLKRAETPAGYPCIRPIHVKATDFVFSGLGTPGNTTNIINAAVTPAFAAQFPGLNGLGLSTARLDLAPKGVIPMHTHPGASEVLFVLTGSITAGFVSSANAVYVQTLKPGQVMVFPQGLLHFQINAGKSSASAVVTFNSANPGLQILDFALFANSLP 182
BLAST of CX301616 vs. ExPASy Swiss-Prot
Match: GL92_ORYSJ (Putative germin-like protein 9-2 OS=Oryza sativa subsp. japonica GN=Os09g0568600 PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.282e-20 Identity = 63/182 (34.62%), Postives = 90/182 (49.45%), Query Frame = 3 Query: 120 ASDPDPLQDVCLADLNAPISING--FPCKPASEVTSDDFFTDFSKNPTTFDVFKRAVTLGDVSGFPAVNTQGVSLFRIDLDVGGINPPHTHPRGTEAGIVTRGKVLVGLVTTNNTFFSKVLTPGMVFLIPRALIHFQLNVGKGPATFIPIFNTQNPGVSDSLTTLFDTTPPISNEVLTKSFR 659 A DPD L D + P++I G F +V F T + P +F VT ++ FPA+N Q VS + +NPPHTHPR E +V G + VG + T N +++ L G +F+ P+ ++HFQ N G PA + F + PGV T+F T I + VL KSF+ Sbjct: 25 AGDPDILTDYVIPANGNPMNITGDFFTFTGFRKV----FNTSSAPEPNSF-----TVTKATMAEFPALNGQSVSYATLVFPPSTVNPPHTHPRSAELLLVVDGALSVGFIDTTNKLYTQDLAAGDMFVFPKGMVHFQFNSGNQPAMALSAFGSAAPGVVPVPVTVFGT--GIDDAVLAKSFK 195
BLAST of CX301616 vs. ExPASy Swiss-Prot
Match: GL813_ORYSJ (Germin-like protein 8-13 OS=Oryza sativa subsp. japonica GN=Os08g0459700 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.627e-19 Identity = 55/167 (32.93%), Postives = 89/167 (53.29%), Query Frame = 3 Query: 141 QDVCLADLNAPISI-NGFPCKPASEVTSDDFFTDFSKNP-TTFDVFKRAVTLGDVSGFPAVNTQGVSLFRIDLDVGGINPPHTHPRGTEAGIVTRGKVLVGLV-TTNNTFFSKVLTPGMVFLIPRALIHFQLNVGKGPATFIPIFNTQNPGVSDSLTTLFDTTPPIS 632 QD C+A+L +G+ C+PA+ VT+ DF++ P F ++ V +PAVN G+S R+D+ GG+ P HTHP G+E V G ++ G + +++N + K ++ G +F+ P+ L+HFQ N G A +++ NPG+ LF P S Sbjct: 29 QDFCVANLPLGADTPSGYQCRPAATVTAADFYSGALARPGILIRPFNTSLASAFVQQYPAVNGLGISASRVDILPGGVVPLHTHPAGSELLYVLDGALVAGFISSSDNKVYYKEVSKGGMFVFPQGLLHFQYNTGDTTAVAFAAYSSSNPGLQILDYALFANNLPTS 195
BLAST of CX301616 vs. ExPASy Swiss-Prot
Match: GL93_ORYSJ (Germin-like protein 9-3 OS=Oryza sativa subsp. japonica GN=Os09g0568700 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.008e-18 Identity = 64/196 (32.65%), Postives = 93/196 (47.45%), Query Frame = 3 Query: 120 ASDPDPLQDVCLADLNAPISINGFPCKPASEVTSDDF-FTDFSKNPTTFDVFKR------AVTLGDVSGFPAVNTQGVSLFRIDLDVGGINPPHTHPRGTEAGIVTRGKVLVGLVTTNNTFFSKVLTPGMVFLIPRALIHFQLNVGKGPATFIPIFNTQNPGVSDSLTTLFDTTPPISNEVLTKSFRVSDDVINAI 686 A DPD L D + P N A +T D F FT F +NP + ++ VT ++ FPA+N Q VS + +NPPHTHPR E ++ G + VG V T N +++ L G +F+ P+ ++HFQ N G PA + F + G+ T+F T I + VL KSF+ I + Sbjct: 23 AGDPDILTDYVI-----PAGSN------AENITGDFFTFTGF-RNPLSMNMSMPMPNANFTVTKATMAEFPALNGQSVSYAVLMYPPATLNPPHTHPRSAELLLLVDGALSVGFVDTTNKLYTQDLAAGDMFVFPKGMVHFQFNSGNQPAMALSAFGSAAAGLVSVPVTVFGTN--IDDAVLAKSFKTDVPTIQKL 204
BLAST of CX301616 vs. ExPASy Swiss-Prot
Match: GLP1_IPONI (Germin-like protein OS=Ipomoea nil GN=GLP PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.289e-16 Identity = 54/152 (35.53%), Postives = 82/152 (53.95%), Query Frame = 3 Query: 138 LQDVCLAD-LNAPISINGFPCKPASEVTSDDF-FTDFSKNPTTFDVFKRAVTLGDVSGFPAVNTQGVSLFRIDLDVGGINPPHTHPRGTEAGIVTRGKVLVGLVTTNNTFFSKVLTPGMVFLIPRALIHFQLNVGKGPATFIPIFNTQNPGV 587 + D C+A+ A + +GF CK ++VT+ DF ++ +K T ++ AVT V FP V GV+L R+DL GG+ P HTHP +E V G +L +++ N + K L PG V + P+ L+ FQ GK A + +NPG+ Sbjct: 24 VNDFCVANGPGARDTPSGFVCKNTAKVTAADFVYSGLAKPGNTTNIINAAVTPAFVGQFPGVIGLGVTLARLDLAPGGVIPMHTHPGASEILNVVEGTILAAFISSGNKVYEKALYPGDVMVFPQGLLDFQEITGK-IAPGLCELRQRNPGL 174
BLAST of CX301616 vs. ExPASy Swiss-Prot
Match: GL91_ORYSJ (Germin-like protein 9-1 OS=Oryza sativa subsp. japonica GN=Os09g0568500 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.417e-15 Identity = 59/192 (30.73%), Postives = 88/192 (45.83%), Query Frame = 3 Query: 120 ASDPDPLQDVCLADLNAPISINGFPCKPASEVTSDDFFTDFSKNPTTFDVFKRAVTLGDVSGFPAVNTQGVSLFRIDLDVGGINPPHTHPRGTEAGIVTRGKVLVGLV--TTNNTFFSKVLTPGMVFLIPRALIHFQLNVGKG-PATFIPIFNTQNPGVSDSLTTLFDTTPPISNEVLTKSFRVSDDVINAI 686 A+DPD L D + P I+G + T + T S +P K VT + FPA+ Q VS + G +NPPH HPR +E +V +G +LVGLV N T +++ L G +F+ P+ ++HFQ N G A F + PG LF + I + +L KS ++ + Sbjct: 25 AADPDILTDFVVPSDTDPSGIDG------AFFTYKNLVTGNSGDPA-----KLTVTKATHAEFPALLGQSVSYAALVFGAGTVNPPHIHPRASELLVVVQGPLLVGLVDAARNGTVYTQTLQTGDMFVFPKGMVHFQFNNGTDVVARAFSAFGSATPGTISLPAALFGS--GIDDTILDKSMHTDQATVDQL 203
BLAST of CX301616 vs. ExPASy Swiss-Prot
Match: SR1A_PHYPO (Spherulin-1A OS=Physarum polycephalum PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.576e-14 Identity = 54/172 (31.40%), Postives = 80/172 (46.51%), Query Frame = 3 Query: 105 PFPSHASDPDPLQDVCLADLNAPISINGFPCKPASEVTSDDFFTDF--SKNPTTFDVFKRAVTLGDVSGFPAVNTQGVSLFRIDLDVGGINPPHTHPRGTEAGIVTRGKVLVGLVTTNNT-FFSKVLTPGMVFLIPRALIHFQLNVGKGPATFIPIFNTQNPGVSDSLTTLF 611 P PS A+ P+ + + LNAP ++ + + F DF SK T + V + FPAV V++ ++ GIN PHTHPR TE + GK G N F L GM + P+ IHF++N+ PA F+ FN ++PGV + ++ F Sbjct: 40 PLPSSAASPELVAQL----LNAPSELDRIKL-----LKDNQFVFDFKNSKLGVTQGTGGKTVATSRTN-FPAVIGHNVAMTVGFIEACGINLPHTHPRATEINFIASGKFEAGFFLENQAKFIGHTLEAGMATVFPQGAIHFEINMNCEPAMFVAAFNNEDPGVQTTASSFF 201
BLAST of CX301616 vs. ExPASy Swiss-Prot
Match: SR1B_PHYPO (Spherulin-1B OS=Physarum polycephalum PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.989e-14 Identity = 37/103 (35.92%), Postives = 57/103 (55.34%), Query Frame = 3 Query: 306 FPAVNTQGVSLFRIDLDVGGINPPHTHPRGTEAGIVTRGKVLVGLVTTNN-TFFSKVLTPGMVFLIPRALIHFQLNVGKGPATFIPIFNTQNPGVSDSLTTLF 611 FPAV +++ ++ GIN PHTHPR TE + +G+ G N TF +L GM + P+ IHF++N+ PA F+ FN ++PGV + ++ F Sbjct: 86 FPAVIGHNIAMTVGFIEACGINLPHTHPRATEINFIAKGRFQAGFFLENQATFIGHILEEGMATVFPQGAIHFEINLECEPAMFVAAFNNEDPGVQTTASSFF 188 The following BLAST results are available for this feature:
BLAST of CX301616 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
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Sequences
The
following sequences are available for this feature:
EST sequence >CX301616 ID=CX301616; Name=CX301616; organism=Citrus sinensis; type=EST; length=686bpback to top |