CX301595

Overview
NameCX301595
Unique NameCX301595
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length706
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15_HYPMO (60S ribosomal protein L15 OS=Hypophthalmichthys molitrix GN=rpl15 PE=2 SV=3)

HSP 1 Score: 293.123 bits (749), Expect = 9.543e-79
Identity = 141/205 (68.78%), Postives = 163/205 (79.51%), Query Frame = 3
Query:   39 MGAYKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPNHKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLRVKGHRANNTIGGSHRAAWKRRNTKVFLRYR 653
            MGAYKY++ELWRKKQS+V+RFLLRVR WQYRQ + + R  +PTRPDKA +LGYKAKQGYV+YRI VRRGGRKRP  KG  YGKP + G+NQ+KF R+L+SVAEERAGR    LRVLNSYW+ +D+TYK+FEVIL+D  H AIR +P   WI   V KHRE RGLTSAGKK RGL  KGH+ + TIGGS RAAWKRRNT    RYR
Sbjct:    1 MGAYKYMQELWRKKQSNVMRFLLRVRCWQYRQLSSLHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSVAEERAGRHCGGLRVLNSYWVGEDSTYKFFEVILIDTFHKAIRRNPDTQWITKAVRKHREMRGLTSAGKKSRGLG-KGHKFHLTIGGSRRAAWKRRNTLQLHRYR 204          
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15_CHITE (60S ribosomal protein L15 OS=Chironomus tentans GN=RpL15 PE=3 SV=3)

HSP 1 Score: 293.123 bits (749), Expect = 9.543e-79
Identity = 138/205 (67.32%), Postives = 165/205 (80.49%), Query Frame = 3
Query:   39 MGAYKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPNHKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLRVKGHRANNTIGGSHRAAWKRRNTKVFLRYR 653
            MGAY+Y++EL+RKKQSDVLR+LLRVR WQYRQ  K+ R  +P+RPDKA +LGYKAKQG+++YRI VRRGGRKRP HKG  YGKPK+ G+NQLK  RNL+SVAEER GR    LRVLNSYW+ QDA +KY+EVI VDP H A+R DP++NW+ N VHKHRE RGLTSAGK  RG+  KG+R + TIGGS RAAW+R+N     RYR
Sbjct:    1 MGAYRYVQELYRKKQSDVLRYLLRVRCWQYRQLTKLHRAPRPSRPDKARRLGYKAKQGFLIYRIRVRRGGRKRPVHKGCTYGKPKSHGVNQLKPYRNLQSVAEERVGRRMGGLRVLNSYWVAQDAAFKYYEVICVDPFHNAVRRDPKVNWVCNAVHKHRELRGLTSAGKSSRGVG-KGYRYSQTIGGSRRAAWRRKNRLHLRRYR 204          
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15_PELFU (60S ribosomal protein L15 OS=Pelteobagrus fulvidraco GN=rpl15 PE=2 SV=3)

HSP 1 Score: 291.197 bits (744), Expect = 3.626e-78
Identity = 139/205 (67.80%), Postives = 164/205 (80.00%), Query Frame = 3
Query:   39 MGAYKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPNHKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLRVKGHRANNTIGGSHRAAWKRRNTKVFLRYR 653
            MGAY+Y+++LWRKKQSDV+RFLLRVR WQYRQ + + R  +PTRPDKA +LGYKAKQGYV+YR+ VRRGGRKRP  KG  YGKP + G+NQ+KF R+L+SVAEERAGR    LRVL+SYW+ +D+TYK+FEVILVD  H AIR +P   WI   VHKHRE RGLTSAGKK RGL  KGH+ + TIGGS RAAW+RRNT    RYR
Sbjct:    1 MGAYRYMQKLWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRVRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSVAEERAGRHCGGLRVLSSYWVGEDSTYKFFEVILVDIFHKAIRRNPDTQWITKAVHKHREMRGLTSAGKKSRGLG-KGHKFHLTIGGSRRAAWRRRNTLQLHRYR 204          
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15B_SCHPO (60S ribosomal protein L15-B OS=Schizosaccharomyces pombe GN=rpl15b PE=1 SV=1)

HSP 1 Score: 291.197 bits (744), Expect = 3.626e-78
Identity = 144/205 (70.24%), Postives = 161/205 (78.54%), Query Frame = 3
Query:   39 MGAYKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPNHKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLRVKGHRANNTIGGSHRAAWKRRNTKVFLRYR 653
            MGAYKYLEEL +KKQSDV  FL RVRAW+YRQ N I R ++P+RPDKA +LGYKAKQGYV+YRI VRRGGRKRP  KG  YGKP +QG+N LK+ R+ R  AEER GR  +NLRVLNSYW+NQDATYK+FEVILVDP+H AIR DPRINWIVNPVHKHRE RGLTS GKK RG+  KGHR NN+      A W R NT    RYR
Sbjct:    1 MGAYKYLEELAKKKQSDVNLFLSRVRAWEYRQMNVIHRASRPSRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGQTYGKPVHQGVNHLKYQRSARCTAEERVGRYCSNLRVLNSYWVNQDATYKFFEVILVDPSHKAIRRDPRINWIVNPVHKHRESRGLTSIGKKSRGIG-KGHRYNNS---PQHATWLRHNTLSLRRYR 201          
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15A_SCHPO (60S ribosomal protein L15-A OS=Schizosaccharomyces pombe GN=rpl15a PE=2 SV=1)

HSP 1 Score: 291.197 bits (744), Expect = 3.626e-78
Identity = 144/205 (70.24%), Postives = 161/205 (78.54%), Query Frame = 3
Query:   39 MGAYKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPNHKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLRVKGHRANNTIGGSHRAAWKRRNTKVFLRYR 653
            MGAYKYLEEL +KKQSDV  FL RVRAW+YRQ N I R ++P+RPDKA +LGYKAKQGYV+YRI VRRGGRKRP  KG  YGKP +QG+N LK+ R+ R  AEER GR  +NLRVLNSYW+NQDATYK+FEVILVDP+H AIR DPRINWIVNPVHKHRE RGLTS GKK RG+  KGHR NN+      A W R NT    RYR
Sbjct:    1 MGAYKYLEELAKKKQSDVNLFLSRVRAWEYRQMNVIHRASRPSRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGQTYGKPVHQGVNHLKYQRSARCTAEERVGRYCSNLRVLNSYWVNQDATYKFFEVILVDPSHKAIRRDPRINWIVNPVHKHRESRGLTSIGKKSRGIG-KGHRFNNS---PQHATWLRHNTLSLRRYR 201          
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15_DROME (60S ribosomal protein L15 OS=Drosophila melanogaster GN=RpL15 PE=2 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 4.009e-77
Identity = 138/205 (67.32%), Postives = 164/205 (80.00%), Query Frame = 3
Query:   39 MGAYKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPNHKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLRVKGHRANNTIGGSHRAAWKRRNTKVFLRYR 653
            MGAY+Y++EL+RKKQSDV+R+LLR+R WQYRQ  K+ R  +PTRPDKA +LGY+AKQG+V+YRI VRRGGRKRP  KG  YGKPK+ G+NQLK  R L+S+AEER GR    LRVLNSYWI QDA+YKYFEVIL+D +H AIR DP+INWI   VHKHRE RGLTSAGK  RG+  KG+R + TIGGS RAAWKR+N +   R R
Sbjct:    1 MGAYRYMQELYRKKQSDVMRYLLRIRVWQYRQLTKLHRSPRPTRPDKARRLGYRAKQGFVIYRIRVRRGGRKRPVPKGCTYGKPKSHGVNQLKPYRGLQSIAEERVGRRLGGLRVLNSYWIAQDASYKYFEVILIDTHHSAIRRDPKINWICKHVHKHRELRGLTSAGKSSRGIG-KGYRYSQTIGGSRRAAWKRKNREHMHRKR 204          
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15_ANOGA (60S ribosomal protein L15 OS=Anopheles gambiae GN=RpL15 PE=2 SV=3)

HSP 1 Score: 283.108 bits (723), Expect = 9.876e-76
Identity = 136/205 (66.34%), Postives = 160/205 (78.05%), Query Frame = 3
Query:   39 MGAYKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPNHKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLRVKGHRANNTIGGSHRAAWKRRNTKVFLRYR 653
            MGAY+Y++EL+RKKQSDV+R+LLR+R WQYRQ  +  R  +P+RPDKA +LGYKAKQG+ ++RI VRRGGRKRP  KG  YGKPK+ G+NQLK  R L+SVAEER GR    LRVLNSYW+ QDA +KYFEVI+VDP H AIR DP +NWI N VHKHRE RGLTSAGK  RGL  KG+R + TIGGS RA W+RRN     RYR
Sbjct:    1 MGAYRYVQELYRKKQSDVMRYLLRIRVWQYRQMTRFHRAPRPSRPDKARRLGYKAKQGFSIFRIRVRRGGRKRPVPKGCTYGKPKSHGVNQLKPYRCLQSVAEERVGRRLGGLRVLNSYWVAQDAAHKYFEVIMVDPAHNAIRRDPNVNWICNAVHKHRELRGLTSAGKSSRGLG-KGYRYSQTIGGSRRACWRRRNRLHLRRYR 204          
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15_DICDI (60S ribosomal protein L15 OS=Dictyostelium discoideum GN=rpl15-1 PE=1 SV=1)

HSP 1 Score: 274.248 bits (700), Expect = 4.587e-73
Identity = 142/206 (68.93%), Postives = 159/206 (77.18%), Query Frame = 3
Query:   39 MGAYKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPNHKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLRVKG-HRANNTIGGSHRAAWKRRNTKVFLRYR 653
            MGAYKYL+EL++KKQSD +RFLLRVR W+YR      R + PTR DKA +LGYKA QG+VVYRI VRRGGRKR    G   GKPK  G+N+LK  RNLRSVAEER GR   NLRVLNSYW+NQD+TYKY+EVILVD +H AIRNDPR NWI  PVHKHRE RGLTSAG K RGLR KG HRA+ T   S +A +KRRNT VF RYR
Sbjct:    1 MGAYKYLQELYKKKQSDAVRFLLRVRCWEYRNLPVCHRASHPTRVDKARRLGYKATQGFVVYRIRVRRGGRKRQVPGGRTGGKPKTHGVNELKPSRNLRSVAEERVGRRCPNLRVLNSYWVNQDSTYKYYEVILVDNSHNAIRNDPRYNWICKPVHKHRELRGLTSAGIKARGLRRKGTHRASKT-RPSRQANYKRRNTVVFHRYR 205          
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15_CAEEL (60S ribosomal protein L15 OS=Caenorhabditis elegans GN=rpl-15 PE=2 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 1.335e-72
Identity = 128/205 (62.44%), Postives = 160/205 (78.05%), Query Frame = 3
Query:   39 MGAYKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPNHKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLRVKGHRANNTIGGSHRAAWKRRNTKVFLRYR 653
            MGAYKY++E+WRKKQSD LR+LLR+R W YRQ + + RV +PTRP+KA +LGY+AKQG+VVYR+ VRRG RKRP  KG  YGKPK  G+N+LK  ++ ++VAE RAGR   +LRVLNSYW+ +D+TYK++EV+L+DP H AIR +P   WI  PVHKHRE+RGLTSAG+K RGL  KG R + T GGS    WKR+NTKVF R R
Sbjct:    1 MGAYKYMQEIWRKKQSDALRYLLRIRTWHYRQLSAVHRVPRPTRPEKARRLGYRAKQGFVVYRVRVRRGNRKRPVCKGQTYGKPKTHGVNELKNAKSKQAVAEGRAGRRLGSLRVLNSYWVAEDSTYKFYEVVLIDPFHKAIRRNPDTQWITKPVHKHREQRGLTSAGRKSRGLG-KGWRFSATRGGSQAKNWKRKNTKVFHRKR 204          
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15_ORCLI (60S ribosomal protein L15 OS=Orconectes limosus GN=RPL15 PE=2 SV=3)

HSP 1 Score: 270.011 bits (689), Expect = 8.651e-72
Identity = 130/205 (63.41%), Postives = 154/205 (75.12%), Query Frame = 3
Query:   39 MGAYKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPNHKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLRVKGHRANNTIGGSHRAAWKRRNTKVFLRYR 653
            MGAYKY++E++RKKQSDV+RFLLR+RAWQYR  NK+ R  +PTRP+KA +LGYKAKQG+V+YRI +RRGGRKRP  KG  YGKPK+ G+NQLK  RNL+S+AEER GR    LRVLNSYW+ QD+TYKYFEVILVD  H  IR    +NWI     KHRE RG TSAG+KHRGL  +G   + T GGS R+ W R NT    R R
Sbjct:    1 MGAYKYMQEIYRKKQSDVMRFLLRIRAWQYRHLNKLHRAPRPTRPEKARRLGYKAKQGFVIYRIRIRRGGRKRPVPKGATYGKPKSHGVNQLKPTRNLQSLAEERTGRRLGGLRVLNSYWVAQDSTYKYFEVILVDIRHNVIRKSGSLNWICKHTQKHREMRGKTSAGRKHRGLG-RGFHYSQTKGGSRRSCWLRHNTLSLRRKR 204          
The following BLAST results are available for this feature:
BLAST of CX301595 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93
Match NameE-valueIdentityDescription
RL15_HYPMO9.543e-7968.7860S ribosomal protein L15 OS=Hypophthalmichthys mo... [more]
RL15_CHITE9.543e-7967.3260S ribosomal protein L15 OS=Chironomus tentans GN... [more]
RL15_PELFU3.626e-7867.8060S ribosomal protein L15 OS=Pelteobagrus fulvidra... [more]
RL15B_SCHPO3.626e-7870.2460S ribosomal protein L15-B OS=Schizosaccharomyces... [more]
RL15A_SCHPO3.626e-7870.2460S ribosomal protein L15-A OS=Schizosaccharomyces... [more]
RL15_DROME4.009e-7767.3260S ribosomal protein L15 OS=Drosophila melanogast... [more]
RL15_ANOGA9.876e-7666.3460S ribosomal protein L15 OS=Anopheles gambiae GN=... [more]
RL15_DICDI4.587e-7368.9360S ribosomal protein L15 OS=Dictyostelium discoid... [more]
RL15_CAEEL1.335e-7262.4460S ribosomal protein L15 OS=Caenorhabditis elegan... [more]
RL15_ORCLI8.651e-7263.4160S ribosomal protein L15 OS=Orconectes limosus GN... [more]

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Properties
Property NameValue
Genbank descriptionC08011E01SK PhyRootSw1 Citrus sinensis cDNA clone C08011E01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX301595 ID=CX301595; Name=CX301595; organism=Citrus sinensis; type=EST; length=706bp
AATTCGGCACGAGGTTAATATCGATTAATTAAACAAAAATGGGAGCATAC
AAGTACCTCGAAGAGCTCTGGAGAAAGAAGCAATCTGATGTGCTTCGTTT
CTTGTTACGTGTTCGTGCTTGGCAATATCGTCAAACCAACAAGATCCAAC
GTGTCAACAAGCCAACTCGCCCAGACAAGGCTCACAAGTTAGGATACAAG
GCCAAGCAAGGATATGTTGTCTACCGTATCGCTGTCCGTCGTGGTGGCCG
CAAGAGACCAAACCACAAGGGTATTGTCTACGGTAAACCAAAGAACCAAG
GTATCAACCAGTTAAAGTTCGTCCGCAACTTACGCAGTGTTGCCGAGGAA
CGTGCTGGTCGTGTTGCTGCCAACTTACGTGTGTTGAACTCTTACTGGAT
CAACCAAGATGCCACCTACAAGTACTTCGAGGTCATCTTAGTCGATCCTA
ACCACGTTGCCATCAGAAACGATCCTCGCATCAACTGGATCGTTAACCCT
GTTCACAAGCACCGCGAACGCCGTGGACTTACCTCCGCTGGCAAGAAGCA
CCGCGGTCTCAGAGTCAAGGGTCACAGAGCCAACAACACCATCGGTGGTT
CCCACAGAGCTGCCTGGAAGCGCCGCAACACCAAGGTCTTCCTCAGATAC
CGTTAATCAACTTCTTCACCTCCTCCATAATGCACTTAGCGTTGTTATTC
CTCGCT
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