CX301562
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX301562 vs. ExPASy Swiss-Prot
Match: MEG11_HUMAN (Multiple epidermal growth factor-like domains protein 11 OS=Homo sapiens GN=MEGF11 PE=2 SV=3) HSP 1 Score: 76.2554 bits (186), Expect = 1.931e-13 Identity = 62/202 (30.69%), Postives = 79/202 (39.11%), Query Frame = 3 Query: 66 CPNGCNGHGSCGTNDQCTCYNR-----IDGE----PAWVNADCSARTCPKSAAWVGSVQNSNDAHPVVECSNKGICDRKTGECQCFPNYDGIACERTVCPNR----CSDSGICFSQNQLATDAGKTYTTPWDSEKEVGCVCDPGRRGPDCSLIECPSGPDVMGGYGNEAGRDC-----SGRGLCDYSSGICNCFHGYYGTKC 617 CP+G G N+ CTC N IDG P W+ C CP + ++ +CS+ CD TG C C + GI C+ T P R CS S C + + + G C C PG RGP C I CP G YG+ + C S R C + SGIC C G+ G C Sbjct: 480 CPSGTWG---LNCNESCTCANGAACSPIDGSCSCTPGWLGDTCEL-PCPDGTFGLNCSEHC-------DCSHADGCDPVTGHCCCLAGWTGIRCDSTCPPGRWGPNCSVSCSCENGGSCSPEDG-------------SCECAPGFRGPLCQRI-CPP-----GFYGHGCAQPCPLCVHSSRP-CHHISGICECLPGFSGALC 650 HSP 2 Score: 67.781 bits (164), Expect = 6.869e-11 Identity = 52/187 (27.81%), Postives = 74/187 (39.57%), Query Frame = 3 Query: 78 CNGHGSCGTND-QCTCYNRIDGEPAWVNADCSARTCPKSAAWVGSVQNSNDAHPVVECSNKGICDRKTGECQCFPNYDGIACERTVCPNRC--SDSG-ICFSQNQLATD--AGKTYTTPWDSEKEVGCVCDPGRRGPDCSLIECPSGPDVMGGYGNEAGRDCSGRGLCDYSSGICNCFHGYYGTKCE 620 C +G+C D C C+ P W+ DCS + CP W + ++ C N C + G C C P + G+ C + CP D G +C QN + D +GK C C G G C C G GYG + +C CD+ +G C C G+ G +C+ Sbjct: 669 CANNGTCSPIDGSCQCF------PGWIGKDCS-QACPPGF-WGPACFHA------CSCHNGASCSAEDGACHCTPGWTGLFCTQR-CPAAFFGKDCGRVCQCQNGASCDHISGK-------------CTCRTGFTGQHCEQ-RCAPGTF---GYGCQQLCECMNNSTCDHVTGTCYCSPGFKGIRCD 823
BLAST of CX301562 vs. ExPASy Swiss-Prot
Match: TENN_MOUSE (Tenascin-N OS=Mus musculus GN=Tnn PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.295e-13 Identity = 44/148 (29.73%), Postives = 58/148 (39.19%), Query Frame = 3 Query: 57 QSACPNGCNGHGSCGTNDQCTCYNRIDGEPAWVNADCSARTCPKSAAWVGSVQNSNDAHPVVECSNKGICDRKTGECQCFPNYDGIACERTVCPNRCSDSGICFSQNQLATDAGKTYTTPWDSEKEVGCVCDPGRRGPDCSLIECPSG 500 Q CP CNGHG C + QC C + +V DC+ CP+ +CS G+C + G CQC ++ C CP CS +G C D G+ C C+ G GPDCS + P G Sbjct: 168 QPTCPGACNGHGRC-VDGQCVC------DAPYVGVDCAYAACPQ------------------DCSGHGVCVQ--GVCQCHEDFTAEDCSEQRCPGDCSGNGFC--------DTGE-------------CYCEMGFTGPDCSQVVAPQG 267
BLAST of CX301562 vs. ExPASy Swiss-Prot
Match: MEG10_XENTR (Multiple epidermal growth factor-like domains protein 10 OS=Xenopus tropicalis GN=megf10 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.586e-13 Identity = 59/198 (29.80%), Postives = 77/198 (38.89%), Query Frame = 3 Query: 66 CPNGCNGH---GSCGTNDQCTCYNRIDGE----PAWVNADCSARTCPKSAAWVGSVQNSNDAHPVVECSNKGICDRKTGECQCFPNYDGIACERTVCP-----NRCSDSGICFSQNQLATDAGKTYTTPWDSEKEVG-CVCDPGRRGPDCSLIECPSGPDVMGGYGNEAGRDCSGRGLCDYSSGICNCFHGYYGTKCE 620 CP+G G G C + TC N IDG P W+ DCS + CP + N C N C GEC+C P + G+ C + CP C+ +C QN D + G C C G G C +CPS GYG DC CD+ +G C C G+ G +C+ Sbjct: 659 CPSGRYGKNCAGVCACTNNGTC-NPIDGTCQCYPGWIGNDCS-QACPPGHWGPNCIHTCN-------CHNGAYCSAYDGECKCSPGWTGLYCTQR-CPLGYYGKECTL--VCQCQNGA------------DCDHITGQCTCRTGFMGKFCEQ-KCPSASY---GYGCRQVCDCLNNSTCDHITGTCYCSPGWKGARCD 828
BLAST of CX301562 vs. ExPASy Swiss-Prot
Match: TENR_HUMAN (Tenascin-R OS=Homo sapiens GN=TNR PE=1 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.252e-12 Identity = 53/185 (28.65%), Postives = 66/185 (35.68%), Query Frame = 3 Query: 78 CNGHG-----SCGTNDQCTCYNRIDGEPAWVNADCSARTCPKSAAWVGSVQNSNDAHPVVECSNKGICDRKTGECQCFPNYDGIACERTVCPNRCSDSGICFSQNQLATDAGKTYTTPWDSEKEVGCVCDPGRRGPDCSLIECPSGPDVMGGYGNEAGRDCSGRGLCDYSSGICNCFHGYYGTKC 617 C+GHG SCG C C W +CS CP + CS++G+C G+C C Y G C CP CS G+C D E CVC+ G DC + CP DCSG+G C ++G C C GY G C Sbjct: 175 CSGHGNFSFESCG----CIC------NEGWFGKNCSEPYCP------------------LGCSSRGVC--VDGQCICDSEYSGDDCSELRCPTDCSSRGLCV-----------------DGE----CVCEEPYTGEDCRELRCPG--------------DCSGKGRC--ANGTCLCEEGYVGEDC 292 HSP 2 Score: 70.4774 bits (171), Expect = 1.060e-11 Identity = 48/160 (30.00%), Postives = 64/160 (40.00%), Query Frame = 3 Query: 66 CPNGCNGHGSCGTNDQCTCYNRIDGEPAWVNADCSARTCPKSAAWVGSVQNSNDAHPVVECSNKGICDRKTGECQCFPNYDGIACERTVCPNRCSDSGICFS------QNQLATDAGKTYTTPWDSEK----EVGCVCDPGRRGPDCSLIECPSGPDVMG 515 CP GC+ G C + QC C + G+ DCS CP +CS++G+C GEC C Y G C CP CS G C + + + D G+ S + E CVC+ G +GPDCS + P V G Sbjct: 204 CPLGCSSRGVC-VDGQCICDSEYSGD------DCSELRCP------------------TDCSSRGLC--VDGECVCEEPYTGEDCRELRCPGDCSGKGRCANGTCLCEEGYVGEDCGQRQCLNACSGRGQCEEGLCVCEEGYQGPDCSAVAPPEDLRVAG 336
BLAST of CX301562 vs. ExPASy Swiss-Prot
Match: TENR_RAT (Tenascin-R OS=Rattus norvegicus GN=Tnr PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.635e-12 Identity = 53/185 (28.65%), Postives = 66/185 (35.68%), Query Frame = 3 Query: 78 CNGHG-----SCGTNDQCTCYNRIDGEPAWVNADCSARTCPKSAAWVGSVQNSNDAHPVVECSNKGICDRKTGECQCFPNYDGIACERTVCPNRCSDSGICFSQNQLATDAGKTYTTPWDSEKEVGCVCDPGRRGPDCSLIECPSGPDVMGGYGNEAGRDCSGRGLCDYSSGICNCFHGYYGTKC 617 C+GHG SCG C C W +CS CP + CS++G+C G+C C Y G C CP CS G+C D E CVC+ G DC + CP DCSG+G C ++G C C GY G C Sbjct: 175 CSGHGNFSFESCG----CIC------NEGWFGKNCSEPYCP------------------LGCSSRGVC--VDGQCICDSEYSGDDCSELRCPTDCSSRGLCV-----------------DGE----CVCEEPYTGEDCRELRCPG--------------DCSGKGQC--ANGTCLCQEGYAGEDC 292 HSP 2 Score: 67.781 bits (164), Expect = 6.869e-11 Identity = 47/160 (29.38%), Postives = 65/160 (40.62%), Query Frame = 3 Query: 66 CPNGCNGHGSCGTNDQCTCYNRIDGEPAWVNADCSARTCPKSAAWVGSVQNSNDAHPVVECSNKGICDRKTGECQCFPNYDGIACERTVCPNRCSDSGICFSQNQLATD--AGKTYT--------TPWDSEKEVGCVCDPGRRGPDCSLIECPSGPDVMG 515 CP GC+ G C + QC C + G+ DCS CP +CS++G+C GEC C Y G C CP CS G C + L + AG+ + + +E C+C+ G +GPDCS + P V G Sbjct: 204 CPLGCSSRGVC-VDGQCICDSEYSGD------DCSELRCP------------------TDCSSRGLC--VDGECVCEEPYTGEDCRELRCPGDCSGKGQCANGTCLCQEGYAGEDCSQRRCLNACSGRGHCQEGLCICEEGYQGPDCSAVTPPEDLRVAG 336
BLAST of CX301562 vs. ExPASy Swiss-Prot
Match: TENR_MOUSE (Tenascin-R OS=Mus musculus GN=Tnr PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.635e-12 Identity = 53/185 (28.65%), Postives = 66/185 (35.68%), Query Frame = 3 Query: 78 CNGHG-----SCGTNDQCTCYNRIDGEPAWVNADCSARTCPKSAAWVGSVQNSNDAHPVVECSNKGICDRKTGECQCFPNYDGIACERTVCPNRCSDSGICFSQNQLATDAGKTYTTPWDSEKEVGCVCDPGRRGPDCSLIECPSGPDVMGGYGNEAGRDCSGRGLCDYSSGICNCFHGYYGTKC 617 C+GHG SCG C C W +CS CP + CS++G+C G+C C Y G C CP CS G+C D E CVC+ G DC + CP DCSG+G C ++G C C GY G C Sbjct: 175 CSGHGNFSFESCG----CIC------NEGWFGKNCSEPYCP------------------LGCSSRGVC--VDGQCICDSEYSGDDCSELRCPTDCSSRGLCV-----------------DGE----CVCEEPYTGEDCRELRCPG--------------DCSGKGQC--ANGTCLCQEGYAGEDC 292 HSP 2 Score: 67.781 bits (164), Expect = 6.869e-11 Identity = 47/160 (29.38%), Postives = 65/160 (40.62%), Query Frame = 3 Query: 66 CPNGCNGHGSCGTNDQCTCYNRIDGEPAWVNADCSARTCPKSAAWVGSVQNSNDAHPVVECSNKGICDRKTGECQCFPNYDGIACERTVCPNRCSDSGICFSQNQLATD--AGKTYT--------TPWDSEKEVGCVCDPGRRGPDCSLIECPSGPDVMG 515 CP GC+ G C + QC C + G+ DCS CP +CS++G+C GEC C Y G C CP CS G C + L + AG+ + + +E C+C+ G +GPDCS + P V G Sbjct: 204 CPLGCSSRGVC-VDGQCICDSEYSGD------DCSELRCP------------------TDCSSRGLC--VDGECVCEEPYTGEDCRELRCPGDCSGKGQCANGTCLCQEGYAGEDCSQRRCLNACSGRGHCQEGLCICEEGYQGPDCSAVAPPEDLRVAG 336
BLAST of CX301562 vs. ExPASy Swiss-Prot
Match: FP2_MYTGA (Adhesive plaque matrix protein 2 OS=Mytilus galloprovincialis GN=FP2 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.789e-12 Identity = 64/229 (27.95%), Postives = 79/229 (34.50%), Query Frame = 3 Query: 3 GTRQILCXXXXXXXXXXXQSAC-PNGCNGHGSC---GTNDQCTCYNRIDGE----------PAWVNADCS-----ARTCPKSAAWVGSVQNSNDAHPVVECSNKGIC--DRKTG-ECQCFPNYDGIACERTVC-PNRCSDSGICFSQNQLATDAGKTYTTPWDSEKEVGCVCDPGRRGPDCSLIECPSGPDVMGGYGNEAGRDCSGRGLCDYSSGICNCFHGYYGTKCE 620 G+ + C ++AC PN C C G +C C N G P N CS C S + G + P C NKG C D KTG +C+C Y G C+ C PN CS+ G C + D + C C PG GP+C C P GG CS G Y C C GY G C+ Sbjct: 65 GSYKCFCKGGYYGYNCNLKNACKPNQCKNKSRCVPVGKTFKCVCRNGNFGRLCEKNVCSPNPCKNNGKCSPLGKTGYKCTCSGGYTGPRCEVHACKPN-PCKNKGRCFPDGKTGYKCRCVDGYSGPTCQENACKPNPCSNGGTCSA----------------DKFGDYSCECRPGYFGPECERYVCAPNPCKNGGI-------CSSDGSGGYR---CRCKGGYSGPTCK 266
BLAST of CX301562 vs. ExPASy Swiss-Prot
Match: PEAR1_HUMAN (Platelet endothelial aggregation receptor 1 OS=Homo sapiens GN=PEAR1 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.643e-12 Identity = 53/197 (26.90%), Postives = 83/197 (42.13%), Query Frame = 3 Query: 66 CPNG-----CNGHGSCGTNDQCTCYNRIDGE----PAWVNADCSARTCPKSAAWVGSVQNSNDAHPVVECSNKGICDRKTGECQCFPNYDGIACERTVCP---NRCSDSGICFSQNQLATDAGKTYTTPWDSEKEVGCVCDPGRRGPDCSLIECPSGPDVMGGYGNEAGRDCSGRGLCDYSSGICNCFHGYYGTKCE 620 CP+G C +C +C+ ++GE P W C+ +CP+ G ++ C + G+C +G CQC P Y G C ++CP + S C +N +A +P D E CVC G + +CS + CP G G+ A C+ +C +G C C G++G C+ Sbjct: 350 CPDGFYGLSCQAPCTCDREHSLSCHP-MNGECSCLPGWAGLHCN-ESCPQDTHGPGCQEHCL-------CLHGGVCQATSGLCQCAPGYTGPHC-ASLCPPDTYGVNCSARCSCENAIA-------CSPIDGE----CVCKEGWQRGNCS-VPCPPG---TWGFSCNASCQCAHEAVCSPQTGACTCTPGWHGAHCQ 521 HSP 2 Score: 68.1662 bits (165), Expect = 5.260e-11 Identity = 61/224 (27.23%), Postives = 76/224 (33.93%), Query Frame = 3 Query: 87 HGSCGTNDQCTCYNRIDGEPAWVNADCSARTCPKSAAWVGSVQNSNDAHPVVECSNKGICDRKTGECQC-------------FPNYDGIACE-RTVCPNRCSD--SGICFSQNQLATDA----------------------GKTYTTPWDSEKEVGCVCDPGRRGPDCSLIECPSGPDVMGGYGNEAGRDCS--GRGLCDYSSGICNCFHGYYGTKCEFQTVLG 638 HG C +QC C P W DCS+ P W C N CD K+G C C P Y G AC+ R C D +G CF + + G + TP S C C PG G CSL CP G +G ++C GLCD +G C C GY G +C + +G Sbjct: 111 HGRCVAPNQCQCV------PGWRGDDCSSECAP--GMW------GPQCDKPCSCGNNSSCDPKSGVCSCPSGLQPPNCLQPCTPGYYGPACQFRCQCHGAPCDPQTGACFCPAERTGPSCDVSCSQGTSGFFCPSTHSCQNGGVFQTPQGS-----CSCPPGWMGTICSL-PCPEG-----FHGPNCSQECRCHNGGLCDRFTGQCRCAPGYTGDRCREECPVG 309
BLAST of CX301562 vs. ExPASy Swiss-Prot
Match: TEN4_HUMAN (Teneurin-4 OS=Homo sapiens GN=ODZ4 PE=2 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 4.757e-12 Identity = 59/216 (27.31%), Postives = 79/216 (36.57%), Query Frame = 3 Query: 66 CPNGCNGHGSCGTNDQCTCYNRIDGEPAWVNADCSARTCPK---------------SAAWVGSVQNSNDAHPV-VECSNKGICDRKTGECQCFPNYDGIACERTVCPN-RCSDSGICF------SQNQLATDAGKTYTTPWDSEKEVG--------CVCDPGRRGPDCSLIECPSGPDVMGGYGNEAGRDCSGRGLCDYSSGICNCFHGYYGTKCE 620 CP+ C G+G C + C C+ ++ DC +CP + W G+ + + V CSN G C TG C C P Y G +CE C + CS G+C S T+ T D G C CDP G DCS+ C + DC G G+C G C C G+ G C+ Sbjct: 566 CPSNCYGNGDC-ISGTCHCF------LGFLGPDCGRASCPVLCSGNGQYMKGRCLCHSGWKGAECDVPTNQCIDVACSNHGTC--ITGTCICNPGYKGESCEEVDCMDPTCSGRGVCVRGECHCSVGWGGTNCETPRATCLDQCSGHGTFLPDTGLCSCDPSWTGHDCSIEICAA--------------DCGGHGVC--VGGTCRCEDGWMGAACD 756
BLAST of CX301562 vs. ExPASy Swiss-Prot
Match: TEN3_HUMAN (Teneurin-3 OS=Homo sapiens GN=ODZ3 PE=2 SV=3) HSP 1 Score: 70.4774 bits (171), Expect = 1.060e-11 Identity = 57/225 (25.33%), Postives = 79/225 (35.11%), Query Frame = 3 Query: 66 CPNGCNGHGSCGTNDQCTCYNRIDGEPAWVNADCSARTCPK---------------SAAWVGS---VQNSNDAHPVVECSNKGICDRKTGECQCFPNYDGIACERTVCPN-RCSDSGICFSQNQLATDAGKTYTTP-WDS---------------------EKEVGCVCDPGRRGPDCSLIECPSGPDVMGGYGNEAGRDCSGRGLCDYSSGICNCFHGYYGTKC 617 CP C+G+G C + C C+ P ++ DCS CP + W G+ V + P +C +GIC G C C Y G +CE C + CS+ G+C G+ + +P W ++ C CDP GPDCS C DC G+C G C C G+ G C Sbjct: 518 CPRNCHGNGEC-VSGTCHCF------PGFLGPDCSRAACPVLCSGNGQYSKGRCLCFSGWKGTECDVPTTQCIDP--QCGGRGIC--IMGSCACNSGYKGESCEEADCIDPGCSNHGVCIH--------GECHCSPGWGGSNCEILKTMCPDQCSGHGTYLQESGSCTCDPNWTGPDCSNEIC--------------SVDCGSHGVC--MGGTCRCEEGWTGPAC 707 HSP 2 Score: 70.0922 bits (170), Expect = 1.384e-11 Identity = 46/159 (28.93%), Postives = 61/159 (38.36%), Query Frame = 3 Query: 57 QSACPNGCNGHGS-CGTNDQCTCYNRIDGEPAWVNADCSAR---------------TCPKSAAWVGSVQNSNDAHPVVECSNKGICDRKTGECQCFPNYDGIACERTVCPNRCSDSGIC-FSQNQLATDAGKTYTTPWDSEKEVGCVCDPGRRGPDCSL 482 ++ CP+ C+GHG+ + CTC +P W DCS TC W G N HP C+ G C K G+C+C ++G C CP C+ +G C QN W CVC PG RG C + Sbjct: 645 KTMCPDQCSGHGTYLQESGSCTC------DPNWTGPDCSNEICSVDCGSHGVCMGGTCRCEEGWTGPACNQRACHP--RCAEHGTC--KDGKCECSQGWNGEHCTIEGCPGLCNSNGRCTLDQNG------------WH------CVCQPGWRGAGCDV 775 The following BLAST results are available for this feature:
BLAST of CX301562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >CX301562 ID=CX301562; Name=CX301562; organism=Citrus sinensis; type=EST; length=728bpback to top |