CX301562
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX301562 vs. ExPASy Swiss-Prot
Match: TEN3_DANRE (Teneurin-3 OS=Danio rerio GN=odz3 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.060e-11 Identity = 54/190 (28.42%), Postives = 70/190 (36.84%), Query Frame = 3 Query: 57 QSACPNGCNGHGSCGTND-QCTCYNRIDGEPAWVNADCSARTCPKSAA---------------WVGSVQNSNDAHPVVECSNKGICDRKTGECQCFPNYDGIACERTVCPNRCSDSGIC-FSQNQLATDAGKTYTTPWDSEKEVGCVCDPGRRGPDCSLIE---CPSGPDVMG-GYGNEAGRDCSGRGLC 563 ++ CP+ C+GHG+ T CTC + W DCS C W GSV + HP C+ G C K G+C+C + G C CP C+ +G C QN W CVC PG RG C + C G D G G + DC + C Sbjct: 535 KTMCPDQCSGHGTYQTESGTCTC------DTNWTGPDCSIEVCAVDCGSHGVCIGGSCRCEEGWTGSVCDLKACHP--RCTEHGTC--KDGKCECHQGWTGEHCTVEGCPGLCNSNGRCTLDQNG------------WH------CVCQPGWRGAGCDVAMETLCADGKDSEGDGLVDCMDPDCCLQSSC 696 HSP 2 Score: 68.9366 bits (167), Expect = 3.084e-11 Identity = 52/206 (25.24%), Postives = 72/206 (34.95%), Query Frame = 3 Query: 66 CPNGCNGHGSCGTNDQCTCYNRIDGEPAWVNADCSARTCPKSAA---------------WVGSVQNSNDAHPV-VECSNKGICDRKTGECQCFPNYDGIACERTVCPN-RCSDSGICFSQNQLATDAGKTYTTPWDSEKEVGCVCDPGRRGPDCSLIE--CPSGPDVMGGYGNEAGRDCSGRGLCDYSSGICNCFHGYYGTKCEFQ 626 CP+ C+G+G C T C C+ P ++ DCS CP + W G+ + + + CS GIC G C C Y G CE C + CS G+C C C+PG G +C +++ CP CSG G SG C C + G C + Sbjct: 408 CPHNCHGNGDCRTGT-CHCF------PGFLGPDCSRAACPVLCSGNGQYSRGRCLCYSGWKGTECDVPSNQCIDIHCSGHGICIM--GTCACNTGYKGDNCEEVDCLDPSCSSHGVCIHGE---------------------CHCNPGWGGNNCEILKTMCPD--------------QCSGHGTYQTESGTCTCDTNWTGPDCSIE 569
BLAST of CX301562 vs. ExPASy Swiss-Prot
Match: MEGF6_HUMAN (Multiple epidermal growth factor-like domains protein 6 OS=Homo sapiens GN=MEGF6 PE=2 SV=4) HSP 1 Score: 68.9366 bits (167), Expect = 3.084e-11 Identity = 59/199 (29.65%), Postives = 72/199 (36.18%), Query Frame = 3 Query: 60 SACPNGCNGHGSCGTNDQCTCYNRIDGEPAWVNADCSARTCPKSAAWVGSVQNSNDAHPVVECSNKGICDRKTGECQCFPNYDGIACERTVCPN-----RCSDSGICFSQNQLATDAGKTYTTPWDSEKEVGCVCDPGRRGPDCSLIECPSGPDVMGGYGNEAGRDCS-GRGLCDYSSGICNCFHGYYGTKCEFQTVLG 638 S+C C G G QC C P DC A CP+ +G + P C + CD +TG C C P + G C+ VCP C C + G P + CD G GPDCS C +CS G G CD SG+C C GY G +CE Q G Sbjct: 742 SSC--SCGGAPCHGVTGQCRC------PPGRTGEDCEA-DCPEGRWGLGC----QEICPA--CQHAARCDPETGACLCLPGFVGSRCQ-DVCPAGWYGPSCQTRCSCANDGHCHPATGHCSCAPGWTGFSCQRACDTGHWGPDCSH-PC----------------NCSAGHGSCDAISGLCLCEAGYVGPRCEQQCPQG 907 HSP 2 Score: 68.9366 bits (167), Expect = 3.084e-11 Identity = 59/206 (28.64%), Postives = 77/206 (37.38%), Query Frame = 3 Query: 57 QSACPNGCNGHGSCGTNDQCTCYNRIDGE-------PAWVNADCSARTCPKSAAWVGSVQNSNDAHPVVECSNKGICDRKTGECQCFPNYDGIACERTV--------CPNRCSDS---GICFSQNQLATDAGKTYTTPWDSEKEVGCVCDPGRRGPDCSLIECPSGPDVMGGYGNEAGRDCSGRGLCDYSSGICNCFHGYYGTKCE 620 ++ CP G G G C R D E P +V + C CP A W G + C+N G C TG C C P + G +C+R C + C+ S G C + + L C+C+ G GP C +CP G G G E C CD+ SG C C G+ GT CE Sbjct: 770 EADCPEGRWGLGCQEICPACQHAARCDPETGACLCLPGFVGSRCQD-VCP--AGWYGPSCQTR-----CSCANDGHCHPATGHCSCAPGWTGFSCQRACDTGHWGPDCSHPCNCSAGHGSCDAISGL-------------------CLCEAGYVGPRCEQ-QCPQG---HFGPGCEQRCQCQHGAACDHVSGACTCPAGWRGTFCE 944
BLAST of CX301562 vs. ExPASy Swiss-Prot
Match: MEGF6_RAT (Multiple epidermal growth factor-like domains protein 6 OS=Rattus norvegicus GN=Megf6 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.869e-11 Identity = 56/197 (28.43%), Postives = 73/197 (37.06%), Query Frame = 3 Query: 57 QSACPNG-----CNGHGSCGTNDQCTCYNRIDGE----PAWVNADCSARTCPKSAAWVGSVQNSNDAHPVVECSNKGICDRKTGECQCFPNYDGIACERTVCPNRCSDSGICFSQNQLATDAGKTYTTPWDSEKEVG-CVCDPGRRGPDCSLIECPSGPDVMGGYGNEAGRDCSGRGLCDYSSGICNCFHGYYGTKC 617 QS+C +G C H +C C + + G P W C + CP+ W G C C TGEC+C P + G++CE+ C L G+T W + G C C G G C L CPSG G G E C G CD ++G C C G+ G C Sbjct: 1120 QSSCVSGTFGVHCEEHCACRKGASC---HHVTGACFCPPGWRGPHCE-QACPRG--WFGEACAQRCL-----CPTNASCHHVTGECRCPPGFTGLSCEQA-----CQPGTFGKDCEHLCQCPGET----WACDPASGVCTCAAGYHGTGC-LQRCPSG---RYGPGCEHICKCLNGGTCDPATGACYCPAGFLGADC 1292
BLAST of CX301562 vs. ExPASy Swiss-Prot
Match: TEN4_MOUSE (Teneurin-4 OS=Mus musculus GN=Odz4 PE=1 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 8.972e-11 Identity = 57/216 (26.39%), Postives = 78/216 (36.11%), Query Frame = 3 Query: 66 CPNGCNGHGSCGTNDQCTCYNRIDGEPAWVNADCSARTCPK---------------SAAWVGSVQNSNDAHPV-VECSNKGICDRKTGECQCFPNYDGIACERTVCPN-RCSDSGICF------SQNQLATDAGKTYTTPWDSEKEVG--------CVCDPGRRGPDCSLIECPSGPDVMGGYGNEAGRDCSGRGLCDYSSGICNCFHGYYGTKCE 620 CP+ C G+G C + C C+ ++ DC +CP + W G+ + + V CS+ G C G C C P Y G +CE C + CS G+C S T+ T D G C CDP G DCS+ C + DC G G+C G C C G+ G C+ Sbjct: 568 CPSNCYGNGDC-ISGTCHCF------LGFLGPDCGRASCPVLCSGNGQYMKGRCLCHSGWKGAECDVPTNQCIDVACSSHGTC--IMGTCICNPGYKGESCEEVDCMDPTCSSRGVCVRGECHCSVGWGGTNCETPRATCLDQCSGHGTFLPDTGLCNCDPSWTGHDCSIEICAA--------------DCGGHGVC--VGGTCRCEDGWMGAACD 758 The following BLAST results are available for this feature:
BLAST of CX301562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX301562 ID=CX301562; Name=CX301562; organism=Citrus sinensis; type=EST; length=728bpback to top |