CX301551
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX301551 vs. ExPASy Swiss-Prot
Match: RL11_HUMAN (60S ribosomal protein L11 OS=Homo sapiens GN=RPL11 PE=1 SV=2) HSP 1 Score: 254.988 bits (650), Expect = 2.486e-67 Identity = 119/172 (69.19%), Postives = 150/172 (87.21%), Query Frame = 2 Query: 35 NEDKLKNPMRQLKVDKLIINCCVGESGDRLTRAAKVLEQLTDKKPVYSKARYTVRSFGIRRNEKIAVHVTVRGFKANEILDRGLKVKEYELKKKNFSNTGCFGFGITEHIDLGLKYDPATGIFGMDFYVVLIRPGYRVARRKIKPGRIGNKHRVTKDDAIAWFQQKYEGIVM 550 ++ + +NPMR+L++ KL +N CVGESGDRLTRAAKVLEQLT + PV+SKARYTVRSFGIRRNEKIAVH TVRG KA EIL++GLKV+EYEL+K NFS+TG FGFGI EHIDLG+KYDP+ GI+G+DFYVVL RPG+ +A +K + G IG KHR++K++A+ WFQQKY+GI++ Sbjct: 4 DQGEKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGIIL 175
BLAST of CX301551 vs. ExPASy Swiss-Prot
Match: RL11_CHILA (60S ribosomal protein L11 OS=Chinchilla lanigera GN=RPL11 PE=2 SV=3) HSP 1 Score: 254.988 bits (650), Expect = 2.486e-67 Identity = 119/172 (69.19%), Postives = 150/172 (87.21%), Query Frame = 2 Query: 35 NEDKLKNPMRQLKVDKLIINCCVGESGDRLTRAAKVLEQLTDKKPVYSKARYTVRSFGIRRNEKIAVHVTVRGFKANEILDRGLKVKEYELKKKNFSNTGCFGFGITEHIDLGLKYDPATGIFGMDFYVVLIRPGYRVARRKIKPGRIGNKHRVTKDDAIAWFQQKYEGIVM 550 ++ + +NPMR+L++ KL +N CVGESGDRLTRAAKVLEQLT + PV+SKARYTVRSFGIRRNEKIAVH TVRG KA EIL++GLKV+EYEL+K NFS+TG FGFGI EHIDLG+KYDP+ GI+G+DFYVVL RPG+ +A +K + G IG KHR++K++A+ WFQQKY+GI++ Sbjct: 4 DQGEKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGIIL 175
BLAST of CX301551 vs. ExPASy Swiss-Prot
Match: RL11_BOVIN (60S ribosomal protein L11 OS=Bos taurus GN=RPL11 PE=2 SV=3) HSP 1 Score: 254.988 bits (650), Expect = 2.486e-67 Identity = 119/172 (69.19%), Postives = 150/172 (87.21%), Query Frame = 2 Query: 35 NEDKLKNPMRQLKVDKLIINCCVGESGDRLTRAAKVLEQLTDKKPVYSKARYTVRSFGIRRNEKIAVHVTVRGFKANEILDRGLKVKEYELKKKNFSNTGCFGFGITEHIDLGLKYDPATGIFGMDFYVVLIRPGYRVARRKIKPGRIGNKHRVTKDDAIAWFQQKYEGIVM 550 ++ + +NPMR+L++ KL +N CVGESGDRLTRAAKVLEQLT + PV+SKARYTVRSFGIRRNEKIAVH TVRG KA EIL++GLKV+EYEL+K NFS+TG FGFGI EHIDLG+KYDP+ GI+G+DFYVVL RPG+ +A +K + G IG KHR++K++A+ WFQQKY+GI++ Sbjct: 4 DQGEKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGIIL 175
BLAST of CX301551 vs. ExPASy Swiss-Prot
Match: RL11_CAEEL (60S ribosomal protein L11 OS=Caenorhabditis elegans GN=rpl-11.1 PE=2 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 4.240e-67 Identity = 123/171 (71.93%), Postives = 145/171 (84.80%), Query Frame = 2 Query: 38 EDKLKNPMRQLKVDKLIINCCVGESGDRLTRAAKVLEQLTDKKPVYSKARYTVRSFGIRRNEKIAVHVTVRGFKANEILDRGLKVKEYELKKKNFSNTGCFGFGITEHIDLGLKYDPATGIFGMDFYVVLIRPGYRVARRKIKPGRIGNKHRVTKDDAIAWFQQKYEGIVM 550 E K +N MR+LK+ KL +N CVGESGDRLTRAAKVLEQLT + PV+SKARYTVR+FGIRRNEKIAVH TVRG KA EIL++GLKVKEYEL K+NFS+TG FGFG+ EHIDLG+KYDP GI+GMDFYVVL R G RV++R+ PGRIG HRV K++ I WFQQKY+GI++ Sbjct: 12 EKKGRNVMRELKIQKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRTFGIRRNEKIAVHCTVRGPKAEEILEKGLKVKEYELFKENFSDTGNFGFGVQEHIDLGIKYDPGIGIYGMDFYVVLNRNGVRVSKRRRAPGRIGPSHRVDKEETIKWFQQKYDGIIL 182
BLAST of CX301551 vs. ExPASy Swiss-Prot
Match: RL11_PONAB (60S ribosomal protein L11 OS=Pongo abelii GN=RPL11 PE=2 SV=3) HSP 1 Score: 253.447 bits (646), Expect = 7.232e-67 Identity = 118/172 (68.60%), Postives = 149/172 (86.63%), Query Frame = 2 Query: 35 NEDKLKNPMRQLKVDKLIINCCVGESGDRLTRAAKVLEQLTDKKPVYSKARYTVRSFGIRRNEKIAVHVTVRGFKANEILDRGLKVKEYELKKKNFSNTGCFGFGITEHIDLGLKYDPATGIFGMDFYVVLIRPGYRVARRKIKPGRIGNKHRVTKDDAIAWFQQKYEGIVM 550 ++ + +NPMR+L++ KL +N CVGESGDRLTRAAKVLEQLT + PV+SKARYTVRSFGIRRNEKIAVH TVRG KA EIL++GLKV+EYEL+K NFS+TG FGFGI EHIDLG+KYDP+ GI+G+DFYVVL RPG+ + +K + G IG KHR++K++A+ WFQQKY+GI++ Sbjct: 4 DQGEKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFSITDKKRRTGCIGAKHRISKEEAMRWFQQKYDGIIL 175
BLAST of CX301551 vs. ExPASy Swiss-Prot
Match: RL11_PIG (60S ribosomal protein L11 OS=Sus scrofa GN=RPL11 PE=2 SV=3) HSP 1 Score: 253.062 bits (645), Expect = 9.446e-67 Identity = 118/172 (68.60%), Postives = 150/172 (87.21%), Query Frame = 2 Query: 35 NEDKLKNPMRQLKVDKLIINCCVGESGDRLTRAAKVLEQLTDKKPVYSKARYTVRSFGIRRNEKIAVHVTVRGFKANEILDRGLKVKEYELKKKNFSNTGCFGFGITEHIDLGLKYDPATGIFGMDFYVVLIRPGYRVARRKIKPGRIGNKHRVTKDDAIAWFQQKYEGIVM 550 ++ + +NPMR+L++ KL +N CVGESGDRLTRAAKVLEQLT + PV+SKARYTVRSFGIRRNEKIAVH TVRG KA EIL++GLKV+EYEL+K NFS+TG FGFGI EHIDLG+KYDP+ GI+G+DFYVVL RPG+ +A +K + G IG KHR++K++A+ WFQQK++GI++ Sbjct: 4 DQGEKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKHDGIIL 175
BLAST of CX301551 vs. ExPASy Swiss-Prot
Match: RL11_SCHPO (60S ribosomal protein L11 OS=Schizosaccharomyces pombe GN=rpl11a PE=1 SV=1) HSP 1 Score: 250.751 bits (639), Expect = 4.688e-66 Identity = 117/170 (68.82%), Postives = 145/170 (85.29%), Query Frame = 2 Query: 41 DKLKNPMRQLKVDKLIINCCVGESGDRLTRAAKVLEQLTDKKPVYSKARYTVRSFGIRRNEKIAVHVTVRGFKANEILDRGLKVKEYELKKKNFSNTGCFGFGITEHIDLGLKYDPATGIFGMDFYVVLIRPGYRVARRKIKPGRIGNKHRVTKDDAIAWFQQKYEGIVM 550 +K +NPM++L++ KL++N +GESGDRLTRAAKVLEQL+ + PV+SKARYT+R FGIRRNEKIA HVTVRG KA EIL+RGLKVKEYELKK+NFS TG FGFGI EHIDLG+KYDP+ GI+GMDFYVV+ RPG RVARRK + GR+G H++ +D I WF+QKY+ +V+ Sbjct: 3 EKAQNPMKELRISKLVLNISLGESGDRLTRAAKVLEQLSGQTPVFSKARYTIRRFGIRRNEKIACHVTVRGPKAEEILERGLKVKEYELKKRNFSATGNFGFGIQEHIDLGIKYDPSIGIYGMDFYVVMDRPGMRVARRKAQRGRVGYTHKINAEDTINWFKQKYDAVVL 172
BLAST of CX301551 vs. ExPASy Swiss-Prot
Match: RL11B_YEAST (60S ribosomal protein L11-B OS=Saccharomyces cerevisiae GN=RPL11B PE=1 SV=3) HSP 1 Score: 249.21 bits (635), Expect = 1.364e-65 Identity = 119/169 (70.41%), Postives = 143/169 (84.62%), Query Frame = 2 Query: 44 KLKNPMRQLKVDKLIINCCVGESGDRLTRAAKVLEQLTDKKPVYSKARYTVRSFGIRRNEKIAVHVTVRGFKANEILDRGLKVKEYELKKKNFSNTGCFGFGITEHIDLGLKYDPATGIFGMDFYVVLIRPGYRVARRKIKPGRIGNKHRVTKDDAIAWFQQKYEGIVM 550 K +NPMR LK++KL++N VGESGDRLTRA+KVLEQL+ + PV SKARYTVR+FGIRRNEKIAVHVTVRG KA EIL+RGLKVKEY+L+ +NFS TG FGFGI EHIDLG+KYDP+ GIFGMDFYVV+ RPG RV RRK G +GN H+ TK+D ++WF+QKY+ V+ Sbjct: 4 KAQNPMRDLKIEKLVLNISVGESGDRLTRASKVLEQLSGQTPVQSKARYTVRTFGIRRNEKIAVHVTVRGPKAEEILERGLKVKEYQLRDRNFSATGNFGFGIDEHIDLGIKYDPSIGIFGMDFYVVMNRPGARVTRRKRCKGTVGNSHKTTKEDTVSWFKQKYDADVL 172
BLAST of CX301551 vs. ExPASy Swiss-Prot
Match: RL11A_YEAST (60S ribosomal protein L11-A OS=Saccharomyces cerevisiae GN=RPL11A PE=1 SV=2) HSP 1 Score: 249.21 bits (635), Expect = 1.364e-65 Identity = 119/169 (70.41%), Postives = 143/169 (84.62%), Query Frame = 2 Query: 44 KLKNPMRQLKVDKLIINCCVGESGDRLTRAAKVLEQLTDKKPVYSKARYTVRSFGIRRNEKIAVHVTVRGFKANEILDRGLKVKEYELKKKNFSNTGCFGFGITEHIDLGLKYDPATGIFGMDFYVVLIRPGYRVARRKIKPGRIGNKHRVTKDDAIAWFQQKYEGIVM 550 K +NPMR LK++KL++N VGESGDRLTRA+KVLEQL+ + PV SKARYTVR+FGIRRNEKIAVHVTVRG KA EIL+RGLKVKEY+L+ +NFS TG FGFGI EHIDLG+KYDP+ GIFGMDFYVV+ RPG RV RRK G +GN H+ TK+D ++WF+QKY+ V+ Sbjct: 4 KAQNPMRDLKIEKLVLNISVGESGDRLTRASKVLEQLSGQTPVQSKARYTVRTFGIRRNEKIAVHVTVRGPKAEEILERGLKVKEYQLRDRNFSATGNFGFGIDEHIDLGIKYDPSIGIFGMDFYVVMNRPGARVTRRKRCKGTVGNSHKTTKEDTVSWFKQKYDADVL 172
BLAST of CX301551 vs. ExPASy Swiss-Prot
Match: RL11_TETTH (60S ribosomal protein L11 OS=Tetrahymena thermophila GN=RPL11 PE=3 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 8.841e-65 Identity = 115/169 (68.05%), Postives = 145/169 (85.80%), Query Frame = 2 Query: 41 DKLKNPMRQLKVDKLIINCCVGESGDRLTRAAKVLEQLTDKKPVYSKARYTVRSFGIRRNEKIAVHVTVRGFKANEILDRGLKVKEYELKKKNFSNTGCFGFGITEHIDLGLKYDPATGIFGMDFYVVLIRPGYRVARRKIKPGRIGNKHRVTKDDAIAWFQQKYEGIV 547 DK +N MR++K+ KL+INCCVGESGD+LT+AAKVL+ L+ ++PV+S+ARYT+RSFGI+RNEK+AVHVT+RG KA +IL RGLKVKE EL+KKNFSNTG FGFGI EHIDLG+KYDP+TGIFGMDFYVVL RPG RVARR+ R+GN ++K++ I WF+ ++EG V Sbjct: 3 DKKENKMREVKIAKLVINCCVGESGDKLTKAAKVLKDLSGQEPVFSRARYTIRSFGIKRNEKMAVHVTIRGDKARDILTRGLKVKEMELRKKNFSNTGNFGFGIQEHIDLGMKYDPSTGIFGMDFYVVLERPGTRVARRRRATSRVGNNQMISKEECINWFKTEFEGNV 171 The following BLAST results are available for this feature:
BLAST of CX301551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 99
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Sequences
The
following sequences are available for this feature:
EST sequence >CX301551 ID=CX301551; Name=CX301551; organism=Citrus sinensis; type=EST; length=651bpback to top |