DY257399
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY257399 vs. ExPASy Swiss-Prot
Match: RBM38_CHICK (RNA-binding protein 38 OS=Gallus gallus GN=RBM38 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.898e-12 Identity = 37/76 (48.68%), Postives = 49/76 (64.47%), Query Frame = 3 Query: 60 RCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEA 287 + FVGGL + TTDSSL + F +GDI E+ +I DR+TG+SRG+GFVT D + A + N +DGR VN A Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPN-PIIDGRKANVNLA 86
BLAST of DY257399 vs. ExPASy Swiss-Prot
Match: RBM24_XENTR (RNA-binding protein 24 OS=Xenopus tropicalis GN=rbm24 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.898e-12 Identity = 37/76 (48.68%), Postives = 49/76 (64.47%), Query Frame = 3 Query: 60 RCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEA 287 + FVGGL + TTDSSL + F +GDI E+ +I DR+TG+SRG+GFVT D + A + N +DGR VN A Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPN-PIIDGRKANVNLA 86
BLAST of DY257399 vs. ExPASy Swiss-Prot
Match: RBM24_CHICK (RNA-binding protein 24 OS=Gallus gallus GN=RBM24 PE=2 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 5.898e-12 Identity = 37/76 (48.68%), Postives = 49/76 (64.47%), Query Frame = 3 Query: 60 RCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEA 287 + FVGGL + TTDSSL + F +GDI E+ +I DR+TG+SRG+GFVT D + A + N +DGR VN A Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPN-PIIDGRKANVNLA 86
BLAST of DY257399 vs. ExPASy Swiss-Prot
Match: RB24B_XENLA (RNA-binding protein 24-B OS=Xenopus laevis GN=rbm24-B PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.898e-12 Identity = 37/76 (48.68%), Postives = 49/76 (64.47%), Query Frame = 3 Query: 60 RCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEA 287 + FVGGL + TTDSSL + F +GDI E+ +I DR+TG+SRG+GFVT D + A + N +DGR VN A Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPN-PIIDGRKANVNLA 86
BLAST of DY257399 vs. ExPASy Swiss-Prot
Match: RB24A_XENLA (RNA-binding protein 24-A OS=Xenopus laevis GN=rbm24-A PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.898e-12 Identity = 37/76 (48.68%), Postives = 49/76 (64.47%), Query Frame = 3 Query: 60 RCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEA 287 + FVGGL + TTDSSL + F +GDI E+ +I DR+TG+SRG+GFVT D + A + N +DGR VN A Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPN-PIIDGRKANVNLA 86
BLAST of DY257399 vs. ExPASy Swiss-Prot
Match: HNRGT_HUMAN (RNA-binding motif protein, X-linked-like-2 OS=Homo sapiens GN=RBMXL2 PE=1 SV=3) HSP 1 Score: 71.2478 bits (173), Expect = 5.898e-12 Identity = 36/84 (42.86%), Postives = 49/84 (58.33%), Query Frame = 3 Query: 36 MASADVEFRCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEA 287 M AD + F+GGL T + +L F YG I+E ++ DRET +SRGF FVTF + A MNG++LDG+ I V +A Sbjct: 1 MVEADRPGKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAARDMNGKSLDGKAIKVAQA 84
BLAST of DY257399 vs. ExPASy Swiss-Prot
Match: ROC5_NICSY (33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.006e-11 Identity = 32/80 (40.00%), Postives = 49/80 (61.25%), Query Frame = 3 Query: 48 DVEFRCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEA 287 D + +V L+WA T L +AF+ + +K+I DR +GRSRGFGF+TF ++M A++ MN L+GR + +N A Sbjct: 214 DSPHKLYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSALDTMNEVELEGRPLRLNVA 293
BLAST of DY257399 vs. ExPASy Swiss-Prot
Match: RBM38_HUMAN (RNA-binding protein 38 OS=Homo sapiens GN=RBM38 PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.314e-11 Identity = 36/76 (47.37%), Postives = 49/76 (64.47%), Query Frame = 3 Query: 60 RCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEA 287 + FVGGL + TTD+SL + F +GDI E+ +I DR+TG+SRG+GFVT D + A + N +DGR VN A Sbjct: 35 KIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPN-PIIDGRKANVNLA 109
BLAST of DY257399 vs. ExPASy Swiss-Prot
Match: RBM38_XENTR (RNA-binding protein 38 OS=Xenopus tropicalis GN=rbm38 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.716e-11 Identity = 36/76 (47.37%), Postives = 49/76 (64.47%), Query Frame = 3 Query: 60 RCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEA 287 + FVGGL + TTD+SL + F +GDI E+ +I DR+TG+SRG+GFVT D + A + N +DGR VN A Sbjct: 12 KIFVGGLPYHTTDASLRKYFEVFGDIDEAVVITDRQTGKSRGYGFVTMSDRAAAERACKDPN-PIIDGRKANVNLA 86
BLAST of DY257399 vs. ExPASy Swiss-Prot
Match: RBY1B_MOUSE (RNA-binding motif protein, Y chromosome, family 1 member B OS=Mus musculus GN=Rbmy1b PE=2 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.241e-11 Identity = 34/85 (40.00%), Postives = 50/85 (58.82%), Query Frame = 3 Query: 36 MASADVEFRCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 290 MA D + F+GGL T +L E F +G + ++ DRET +SRGF F+TFR ++A++ MNG LDG+ I V +A+ Sbjct: 1 MAETDQPGKIFIGGLNIKTRQKTLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRPADAKNAVKEMNGVILDGKRIKVKQAR 85 The following BLAST results are available for this feature:
BLAST of DY257399 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
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Sequences
The
following sequences are available for this feature:
EST sequence >DY257399 ID=DY257399; Name=DY257399; organism=Citrus sinensis; type=EST; length=705bpback to top |