DY257394

Overview
NameDY257394
Unique NameDY257394
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length571
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY257394 vs. ExPASy Swiss-Prot
Match: SAR1A_DICDI (GTP-binding protein Sar1A OS=Dictyostelium discoideum GN=sarA PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.343e-11
Identity = 38/126 (30.16%), Postives = 66/126 (52.38%), Query Frame = 1
Query:   13 NISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPN--------AMNAAEIT--DKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSN 360
            NI F  +D+GG +  R LW+ Y+ +   +++++DS+ +DR VE++ EL  +L+ DEL +   L+  NK D+ N        ++   + T   K  L+ +R    ++ S       G  EG  WL+N
Sbjct:   63 NIRFKAFDLGGHESARRLWKDYYPSVDAIVYLIDSSAQDRFVESKKELDSLLSSDELANVPFLILGNKVDIGNTSEEKFRASLGLTQTTGKGKTTLNGVRPIEVFMCS--VVKRYGYAEGFRWLAN 186          
BLAST of DY257394 vs. ExPASy Swiss-Prot
Match: ARL10_MOUSE (ADP-ribosylation factor-like protein 10 OS=Mus musculus GN=Arl10 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.343e-11
Identity = 40/112 (35.71%), Postives = 62/112 (55.36%), Query Frame = 1
Query:   10 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLG-LHSLRQRH-WYIQSTCATSGEGLYE 339
            KN    + ++G    +R  W+ +      L+F+VDS DR R+  AR EL ++L+ D   D  +++ ANKQDL  AMN  E+  +LG L S  QR  + + ++ A +G G  E
Sbjct:  119 KNFEVDLLEIGDSQNLRFYWKEFVNEVDVLVFMVDSTDRLRLPWARQELQKLLDRDP--DLPVVIVANKQDLSGAMNMVELQQELGLLASYNQREVFLLAASIAPAGSGFGE 228          
BLAST of DY257394 vs. ExPASy Swiss-Prot
Match: SAR1A_PONAB (GTP-binding protein SAR1a OS=Pongo abelii GN=SAR1A PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.366e-11
Identity = 34/129 (26.36%), Postives = 67/129 (51.94%), Query Frame = 1
Query:   16 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH------------SLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 366
            ++FT +D+GG ++ R +W++Y     G++F+VD  D  R+VE++ EL+ ++ ++ + +  +L+  NK D  +A++  ++ +  GL+             L  R   +        +G  EG  WLS  I
Sbjct:   69 MTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHSRLVESKVELNALMTDETISNVPILILGNKIDRTDAISEEKLREIFGLYGQTTGKGNVTLKELNARPMEVFMCSVLKRQGYGEGFRWLSQYI 197          
BLAST of DY257394 vs. ExPASy Swiss-Prot
Match: SAR1A_HUMAN (GTP-binding protein SAR1a OS=Homo sapiens GN=SAR1A PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.366e-11
Identity = 34/129 (26.36%), Postives = 67/129 (51.94%), Query Frame = 1
Query:   16 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH------------SLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 366
            ++FT +D+GG ++ R +W++Y     G++F+VD  D  R+VE++ EL+ ++ ++ + +  +L+  NK D  +A++  ++ +  GL+             L  R   +        +G  EG  WLS  I
Sbjct:   69 MTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHSRLVESKVELNALMTDETISNVPILILGNKIDRTDAISEEKLREIFGLYGQTTGKGNVTLKELNARPMEVFMCSVLKRQGYGEGFRWLSQYI 197          
BLAST of DY257394 vs. ExPASy Swiss-Prot
Match: SAR1B_MOUSE (GTP-binding protein SAR1b OS=Mus musculus GN=Sar1b PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.702e-11
Identity = 32/129 (24.81%), Postives = 66/129 (51.16%), Query Frame = 1
Query:   16 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH------------SLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 366
            ++FT +D+GG  + R +W++Y     G++F+VD  D +R++E+++EL  ++ ++ + +  +L+  NK D P A++   + +  GL+             L  R   +        +G  EG  W++  I
Sbjct:   69 MTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEGFRWMAQYI 197          
BLAST of DY257394 vs. ExPASy Swiss-Prot
Match: SAR1B_HUMAN (GTP-binding protein SAR1b OS=Homo sapiens GN=SAR1B PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.702e-11
Identity = 32/129 (24.81%), Postives = 66/129 (51.16%), Query Frame = 1
Query:   16 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH------------SLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 366
            ++FT +D+GG  + R +W++Y     G++F+VD  D +R++E+++EL  ++ ++ + +  +L+  NK D P A++   + +  GL+             L  R   +        +G  EG  W++  I
Sbjct:   69 MTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSISLKELNARPLEVFMCSVLKRQGYGEGFRWMAQYI 197          
BLAST of DY257394 vs. ExPASy Swiss-Prot
Match: SAR1B_CRIGR (GTP-binding protein SAR1b OS=Cricetulus griseus GN=SAR1B PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.702e-11
Identity = 32/129 (24.81%), Postives = 66/129 (51.16%), Query Frame = 1
Query:   16 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH------------SLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 366
            ++FT +D+GG  + R +W++Y     G++F+VD  D +R++E+++EL  ++ ++ + +  +L+  NK D P A++   + +  GL+             L  R   +        +G  EG  W++  I
Sbjct:   69 MTFTTFDLGGHIQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEGFRWMAQYI 197          
BLAST of DY257394 vs. ExPASy Swiss-Prot
Match: SAR1B_RAT (GTP-binding protein SAR1b OS=Rattus norvegicus GN=Sar1b PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 7.447e-11
Identity = 32/129 (24.81%), Postives = 66/129 (51.16%), Query Frame = 1
Query:   16 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH------------SLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 366
            ++FT +D+GG  + R +W++Y     G++F+VD  D +R++E+++EL  ++ ++ + +  +L+  NK D P A++   + +  GL+             L  R   +        +G  EG  W++  I
Sbjct:   69 MTFTTFDLGGHLQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEGFRWMAQYI 197          
BLAST of DY257394 vs. ExPASy Swiss-Prot
Match: SAR1B_PIG (GTP-binding protein SAR1b OS=Sus scrofa GN=SAR1B PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 7.447e-11
Identity = 32/129 (24.81%), Postives = 66/129 (51.16%), Query Frame = 1
Query:   16 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH------------SLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 366
            ++FT +D+GG  + R +W++Y     G++F+VD  D +R++E+++EL  ++ ++ + +  +L+  NK D P A++   + +  GL+             L  R   +        +G  EG  W++  I
Sbjct:   69 MTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETVANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEGFRWMAQYI 197          
BLAST of DY257394 vs. ExPASy Swiss-Prot
Match: SAR1B_BOVIN (GTP-binding protein SAR1b OS=Bos taurus GN=SAR1B PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 7.447e-11
Identity = 32/129 (24.81%), Postives = 66/129 (51.16%), Query Frame = 1
Query:   16 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH------------SLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 366
            ++FT +D+GG  + R +W++Y     G++F+VD  D +R++E+++EL  ++ ++ + +  +L+  NK D P A++   + +  GL+             L  R   +        +G  EG  W++  I
Sbjct:   69 MTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETVANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGNVSLKELNARPLEVFMCSVLKRQGYGEGFRWMAQYI 197          
The following BLAST results are available for this feature:
BLAST of DY257394 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 200
Match NameE-valueIdentityDescription
SAR1A_DICDI3.343e-1130.16GTP-binding protein Sar1A OS=Dictyostelium discoid... [more]
ARL10_MOUSE3.343e-1135.71ADP-ribosylation factor-like protein 10 OS=Mus mus... [more]
SAR1A_PONAB4.366e-1126.36GTP-binding protein SAR1a OS=Pongo abelii GN=SAR1A... [more]
SAR1A_HUMAN4.366e-1126.36GTP-binding protein SAR1a OS=Homo sapiens GN=SAR1A... [more]
SAR1B_MOUSE5.702e-1124.81GTP-binding protein SAR1b OS=Mus musculus GN=Sar1b... [more]
SAR1B_HUMAN5.702e-1124.81GTP-binding protein SAR1b OS=Homo sapiens GN=SAR1B... [more]
SAR1B_CRIGR5.702e-1124.81GTP-binding protein SAR1b OS=Cricetulus griseus GN... [more]
SAR1B_RAT7.447e-1124.81GTP-binding protein SAR1b OS=Rattus norvegicus GN=... [more]
SAR1B_PIG7.447e-1124.81GTP-binding protein SAR1b OS=Sus scrofa GN=SAR1B P... [more]
SAR1B_BOVIN7.447e-1124.81GTP-binding protein SAR1b OS=Bos taurus GN=SAR1B P... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK2BE03FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257394 ID=DY257394; Name=DY257394; organism=Citrus sinensis; type=EST; length=571bp
GTTGAGTATAAGAACATCAGCTTTACTGTCTGGGATGTCGGGGGTCAAGA
CAAGATCCGACCTTTGTGGAGACATTATTTCCAAAACACCCAAGGACTCA
TCTTTGTGGTTGACAGTAATGATCGCGACCGTGTGGTAGAAGCTAGGGAT
GAGTTGCACAGAATGTTGAATGAGGATGAATTGAGAGATGCTGTGCTGCT
TGTATTTGCTAACAAGCAAGATCTTCCAAATGCAATGAATGCTGCTGAGA
TAACTGACAAGCTTGGCCTTCACTCTCTTCGCCAGCGCCACTGGTATATC
CAGAGCACATGTGCCACTTCTGGTGAAGGGCTGTATGAGGGACTTGACTG
GCTCTCAAACAACATTGCAAACAAGGCATAGACAACTAAATTTTGAGTTT
TGGGTTGCCGCAACTGCTGAAATACAGAGTTAACAACACATCTCAAGTGT
TCTTGCTTTCCTTCCTGTAATAGCTTCGTTGCCCGTTTTACTGTGTTTGT
TGTTTCCCTTGCAAACGTTGAGATTTGTTTCTTGTAGCTTCAGAATAATT
CTTGAATGTTTATCTTTNNNA
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