DY257513

Overview
NameDY257513
Unique NameDY257513
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length633
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_LACF3 (Uracil phosphoribosyltransferase OS=Lactobacillus fermentum (strain IFO 3956 / LMG 18251) GN=upp PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 6.314e-20
Identity = 46/96 (47.92%), Postives = 68/96 (70.83%), Query Frame = 1
Query:  121 YEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            + KLPNDI+ER + ++DP+LATG SA  AI+ L ++G  E ++ F  L++APEG+  V + FP + I T+ +D  LNE+  ++PGLG+ GDR FGT
Sbjct:  115 FVKLPNDITERQLFIVDPMLATGGSAVMAIEALKKRGCQEKNMKFACLVAAPEGVKAVQEAFPDVDIYTAGLDERLNEDGYIVPGLGDAGDRLFGT 210          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_THETN (Uracil phosphoribosyltransferase OS=Thermoanaerobacter tengcongensis GN=upp PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.134e-19
Identity = 52/109 (47.71%), Postives = 72/109 (66.06%), Query Frame = 1
Query:   85 IHRDGDNGKQLIYE-KLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            I+RD +  K + Y  KLP+DI+ER ++++DP+LATG SA+ AI  L E+G     ++  NLI+APEGI  V K  P + I  + ID  LNE   ++PGLG+ GDR FGT
Sbjct:  103 IYRDPETLKPVEYYCKLPSDIAERDLIVVDPMLATGGSASAAIHFLKERGAQSIKLV--NLIAAPEGIKAVHKDHPEVPIYVASIDQGLNEHGYIVPGLGDAGDRLFGT 209          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_RALSO (Uracil phosphoribosyltransferase OS=Ralstonia solanacearum GN=upp PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.134e-19
Identity = 50/136 (36.76%), Postives = 79/136 (58.09%), Query Frame = 1
Query:    1 VSTVMLSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            V  V+ +G  M + L             ++RD  +       +LP D+ ER  +L DP++ATG+SA  A+ ++ ++GVP+ HI+FL L++APEG+    +  P +K+  + +D  LNE   +IPGLG+ GDR FGT
Sbjct:   80 VVPVLRAGVGMSDGLLELIPSARVGHIGVYRDEQHRPVEYLVRLP-DLEERTFILCDPMVATGHSAVHAVDVMKQRGVPDEHILFLALVAAPEGVEVFQQAHPGVKLYVASLDSHLNEHAYIIPGLGDAGDRLFGT 214          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_LACRJ (Uracil phosphoribosyltransferase OS=Lactobacillus reuteri (strain JCM 1112) GN=upp PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.134e-19
Identity = 45/96 (46.88%), Postives = 67/96 (69.79%), Query Frame = 1
Query:  121 YEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            + KLPNDI+ER + ++DP+LATG SA  AI+ L ++G  E ++ F  L++APEG+  V   +P + I T+ +D  LNE+  ++PGLG+ GDR FGT
Sbjct:  115 FVKLPNDITERQLFIVDPMLATGGSAMMAIEALKKRGCSEKNMKFACLVAAPEGVKAVRDAYPDVDIYTAGLDDHLNEDGYIVPGLGDAGDRLFGT 210          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_LACRD (Uracil phosphoribosyltransferase OS=Lactobacillus reuteri (strain DSM 20016) GN=upp PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.134e-19
Identity = 45/96 (46.88%), Postives = 67/96 (69.79%), Query Frame = 1
Query:  121 YEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            + KLPNDI+ER + ++DP+LATG SA  AI+ L ++G  E ++ F  L++APEG+  V   +P + I T+ +D  LNE+  ++PGLG+ GDR FGT
Sbjct:  115 FVKLPNDITERQLFIVDPMLATGGSAMMAIEALKKRGCSEKNMKFACLVAAPEGVKAVRDAYPDVDIYTAGLDDHLNEDGYIVPGLGDAGDRLFGT 210          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_DEIRA (Uracil phosphoribosyltransferase OS=Deinococcus radiodurans GN=upp PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.093e-19
Identity = 48/96 (50.00%), Postives = 64/96 (66.67%), Query Frame = 1
Query:  121 YEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            Y KLP DI+ER V L DP+LATG SAN AIQ L + G     I  + +++APEGIH V +  P + IVT+ +D  LN+   ++PGLG+ GDR +GT
Sbjct:  116 YSKLPADIAERRVFLTDPMLATGGSANAAIQNLKDAGAQS--IKLMTILAAPEGIHAVQQAHPDVDIVTASVDSRLNDHGYIVPGLGDAGDRIYGT 209          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_DANRE (Uracil phosphoribosyltransferase OS=Danio rerio GN=uprt PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 6.981e-19
Identity = 54/136 (39.71%), Postives = 76/136 (55.88%), Query Frame = 1
Query:    7 TVMLSGESMENALRAXXXXXXXXXXLIHRDGDNGK-QLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGTD 411
            ++M SGE+ME  LR           LI  D +  K ++ Y K P DIS R VLL+ P+L+TGN+  +A+++L E G+   HII L+L S P G   + + FP + I+T+E+         V P    FG RYFGTD
Sbjct:  131 SIMRSGEAMEQGLRDCCRSIRIGKILIQSDEETQKAKVYYAKFPPDISRRKVLLMYPILSTGNTVIEAVRVLTEHGLQAKHIILLSLFSTPHGARSIVQEFPDITILTTEVHA-------VAP--THFGQRYFGTD 257          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_THEPX (Uracil phosphoribosyltransferase OS=Thermoanaerobacter sp. (strain X514) GN=upp PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 9.118e-19
Identity = 52/109 (47.71%), Postives = 72/109 (66.06%), Query Frame = 1
Query:   85 IHRDGDNGKQLIYE-KLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            I+RD +  K + Y  KLP+DI+ER ++++DP+LATG SA  AI  L E+G    +I  +NLI+APEGI  V +  P + I  + ID  LNE   ++PGLG+ GDR FGT
Sbjct:  103 IYRDPETLKPVEYYCKLPSDIAERDLIVVDPMLATGGSACAAIHFLKERGA--QNIKLVNLIAAPEGIEAVHRDHPEVPIYVASIDQGLNEHGYIVPGLGDAGDRLFGT 209          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_THEP3 (Uracil phosphoribosyltransferase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=upp PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 9.118e-19
Identity = 52/109 (47.71%), Postives = 72/109 (66.06%), Query Frame = 1
Query:   85 IHRDGDNGKQLIYE-KLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            I+RD +  K + Y  KLP+DI+ER ++++DP+LATG SA  AI  L E+G    +I  +NLI+APEGI  V +  P + I  + ID  LNE   ++PGLG+ GDR FGT
Sbjct:  103 IYRDPETLKPVEYYCKLPSDIAERDLIVVDPMLATGGSACAAIHFLKERGA--QNIKLVNLIAAPEGIEAVHRDHPEVPIYVASIDQGLNEHGYIVPGLGDAGDRLFGT 209          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_FUSNN (Uracil phosphoribosyltransferase OS=Fusobacterium nucleatum subsp. nucleatum GN=upp PE=3 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 2.653e-18
Identity = 49/96 (51.04%), Postives = 66/96 (68.75%), Query Frame = 1
Query:  121 YEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            Y KLP DI+ R V+L+DP+LATG SA  AI  L E+GV +  IIF+ L++AP+GI  +  + P + I T++ID  LNE   + PGLG+ GDR FGT
Sbjct:  113 YCKLPTDIASRKVILVDPMLATGGSAVYAIDYLKEQGVTD--IIFMCLVAAPDGIARLLNKHPDVPIYTAKIDQGLNENGYIYPGLGDCGDRIFGT 206          
The following BLAST results are available for this feature:
BLAST of DY257513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 481
Match NameE-valueIdentityDescription
UPP_LACF36.314e-2047.92Uracil phosphoribosyltransferase OS=Lactobacillus ... [more]
UPP_THETN3.134e-1947.71Uracil phosphoribosyltransferase OS=Thermoanaeroba... [more]
UPP_RALSO3.134e-1936.76Uracil phosphoribosyltransferase OS=Ralstonia sola... [more]
UPP_LACRJ3.134e-1946.88Uracil phosphoribosyltransferase OS=Lactobacillus ... [more]
UPP_LACRD3.134e-1946.88Uracil phosphoribosyltransferase OS=Lactobacillus ... [more]
UPP_DEIRA4.093e-1950.00Uracil phosphoribosyltransferase OS=Deinococcus ra... [more]
UPP_DANRE6.981e-1939.71Uracil phosphoribosyltransferase OS=Danio rerio GN... [more]
UPP_THEPX9.118e-1947.71Uracil phosphoribosyltransferase OS=Thermoanaeroba... [more]
UPP_THEP39.118e-1947.71Uracil phosphoribosyltransferase OS=Thermoanaeroba... [more]
UPP_FUSNN2.653e-1851.04Uracil phosphoribosyltransferase OS=Fusobacterium ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK2DG09FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257513 ID=DY257513; Name=DY257513; organism=Citrus sinensis; type=EST; length=633bp
GTTTCTACTGTGATGTTAAGTGGTGAAAGCATGGAAAATGCATTGCGTGC
ATGTTGCAAAGGAATAAAAATTGGAAAAATTCTGATTCACCGTGATGGGG
ACAATGGCAAACAGCTTATCTATGAGAAGCTGCCAAATGATATTTCAGAA
AGACATGTCCTGCTTCTAGATCCTGTTCTTGCCACAGGGAACTCTGCCAA
CCAAGCTATTCAACTACTCATAGAGAAAGGAGTTCCAGAATCCCACATAA
TATTCTTGAATCTCATCTCTGCTCCAGAGGGAATCCATTGTGTTTGCAAA
CGTTTTCCATCACTGAAAATTGTCACTTCAGAGATTGATGTTGCTTTGAA
TGAAGAATTCCGTGTGATACCTGGTCTGGGTGAGTTTGGCGACCGTTACT
TTGGCACTGATGATTGATAGGCTGAAGGTCAAGTAGTGGAGATTGTTAGC
TCTTATCAAATGGGTTGATTTCCCTAGAAATAACATAAATCAATATTTTG
AAAGCTGAGGGAGGCATGTTTCCTGAAAGACGAAAAATAAACAGAAAAGG
GGGGAAAAAAGTCTGAAGGGAGACCCCCACTTTGCAAAATATAATACAAA
TGCTGATTGTTCTCNNNNNNNAANAAAAAAAAA
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