DY257513

Overview
NameDY257513
Unique NameDY257513
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length633
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_BURTA (Uracil phosphoribosyltransferase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=upp PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.232e-15
Identity = 46/133 (34.59%), Postives = 73/133 (54.89%), Query Frame = 1
Query:   10 VMLSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            V+ +G  M + L             ++R  D+       +LP D+ +R  +L DP++ATG SA  AI +L  +GVP   I+FL L++APEG+       P +K+  + +D  L++   ++PGLG+ GDR FGT
Sbjct:   83 VLRAGVGMSDGLLELIPSARVGHIGVYRADDHRPVEYLVRLP-DLEDRIFILCDPMVATGYSAAHAIDVLKRRGVPGERIMFLALVAAPEGVQVFQDAHPDVKLYVASLDSHLDDHAYIVPGLGDAGDRLFGT 214          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_STRTD (Uracil phosphoribosyltransferase OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=upp PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.609e-15
Identity = 44/109 (40.37%), Postives = 70/109 (64.22%), Query Frame = 1
Query:   85 IHRDGDNGKQLIY-EKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            ++RD +  + + Y  KLP DI +R + ++DP+LATG SA  A+  L ++G   ++I F+ L++APEG+  +    P + I T+ +D  LNE   ++PGLG+ GDR FGT
Sbjct:  102 MYRDEETLEPVEYLVKLPEDIDQRQIFVMDPMLATGGSAILAVDSLKKRGA--ANIKFVCLVAAPEGVKKLQDAHPDIDIYTASLDERLNENGYIVPGLGDAGDRLFGT 208          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_STRT2 (Uracil phosphoribosyltransferase OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=upp PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.609e-15
Identity = 44/109 (40.37%), Postives = 70/109 (64.22%), Query Frame = 1
Query:   85 IHRDGDNGKQLIY-EKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            ++RD +  + + Y  KLP DI +R + ++DP+LATG SA  A+  L ++G   ++I F+ L++APEG+  +    P + I T+ +D  LNE   ++PGLG+ GDR FGT
Sbjct:  102 MYRDEETLEPVEYLVKLPEDIDQRQIFVMDPMLATGGSAILAVDSLKKRGA--ANIKFVCLVAAPEGVKKLQDAHPDIDIYTASLDERLNENGYIVPGLGDAGDRLFGT 208          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_STRT1 (Uracil phosphoribosyltransferase OS=Streptococcus thermophilus (strain CNRZ 1066) GN=upp PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.609e-15
Identity = 44/109 (40.37%), Postives = 70/109 (64.22%), Query Frame = 1
Query:   85 IHRDGDNGKQLIY-EKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            ++RD +  + + Y  KLP DI +R + ++DP+LATG SA  A+  L ++G   ++I F+ L++APEG+  +    P + I T+ +D  LNE   ++PGLG+ GDR FGT
Sbjct:  102 MYRDEETLEPVEYLVKLPEDIDQRQIFVMDPMLATGGSAILAVDSLKKRGA--ANIKFVCLVAAPEGVKKLQDAHPDIDIYTASLDERLNENGYIVPGLGDAGDRLFGT 208          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_STRA5 (Uracil phosphoribosyltransferase OS=Streptococcus agalactiae serotype V GN=upp PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.609e-15
Identity = 44/109 (40.37%), Postives = 70/109 (64.22%), Query Frame = 1
Query:   85 IHRDGDNGKQLIY-EKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            ++RD +  + + Y  KLP DI +R + ++DP+LATG SA  A+  L ++G   + I F+ L++APEG+  + +  P + I T+ +D  LNE   ++PGLG+ GDR FGT
Sbjct:  102 MYRDEETFQPVEYLVKLPEDIDQRQIFVVDPMLATGGSAILAVDSLKKRGA--ASIKFVCLVAAPEGVAALQEAHPDVDIYTAALDEKLNEHGYIVPGLGDAGDRLFGT 208          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_STRA3 (Uracil phosphoribosyltransferase OS=Streptococcus agalactiae serotype III GN=upp PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.609e-15
Identity = 44/109 (40.37%), Postives = 70/109 (64.22%), Query Frame = 1
Query:   85 IHRDGDNGKQLIY-EKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            ++RD +  + + Y  KLP DI +R + ++DP+LATG SA  A+  L ++G   + I F+ L++APEG+  + +  P + I T+ +D  LNE   ++PGLG+ GDR FGT
Sbjct:  102 MYRDEETFQPVEYLVKLPEDIDQRQIFVVDPMLATGGSAILAVDSLKKRGA--ASIKFVCLVAAPEGVAALQEAHPDVDIYTAALDEKLNEHGYIVPGLGDAGDRLFGT 208          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_STRA1 (Uracil phosphoribosyltransferase OS=Streptococcus agalactiae serotype Ia GN=upp PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.609e-15
Identity = 44/109 (40.37%), Postives = 70/109 (64.22%), Query Frame = 1
Query:   85 IHRDGDNGKQLIY-EKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            ++RD +  + + Y  KLP DI +R + ++DP+LATG SA  A+  L ++G   + I F+ L++APEG+  + +  P + I T+ +D  LNE   ++PGLG+ GDR FGT
Sbjct:  102 MYRDEETFQPVEYLVKLPEDIDQRQIFVVDPMLATGGSAILAVDSLKKRGA--ASIKFVCLVAAPEGVAALQEAHPDVDIYTAALDEKLNEHGYIVPGLGDAGDRLFGT 208          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_RHOCS (Uracil phosphoribosyltransferase OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=upp PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.609e-15
Identity = 45/109 (41.28%), Postives = 68/109 (62.39%), Query Frame = 1
Query:   85 IHRDGDNGKQLIY-EKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            ++RD D    + Y  KLP D + R  +L+DP+LATGNSA  A+ +L   GV ++ I F+ L++APEG+       P++ + T+ +D  LN    ++PGLG+ GDR FGT
Sbjct:  108 LYRDHDTKMPVEYLVKLP-DPAGRRFILVDPMLATGNSAVHAVDVLNRNGVLDAQIRFMALVAAPEGVRTFHAAHPTVPVFTAGLDSHLNPNAYIVPGLGDAGDRLFGT 215          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_RHILO (Uracil phosphoribosyltransferase OS=Rhizobium loti GN=upp PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.609e-15
Identity = 47/109 (43.12%), Postives = 72/109 (66.06%), Query Frame = 1
Query:   85 IHRDGDNGKQLIYE-KLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            ++RD +  + + Y  K P+D+++R V+++DP+LAT NSA  AI  L  KG   ++I FL L++APEGI    K  P + + T+ ID  LNE+  ++PGLG+ GDR +GT
Sbjct:  102 LYRDHETLEAVEYFFKAPSDLADRLVIVVDPMLATANSAIAAIDKL--KGRGATNIRFLCLLAAPEGIERFTKAHPDVPVFTASIDRQLNEKGYIMPGLGDAGDRMYGT 208          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_PSEPK (Uracil phosphoribosyltransferase OS=Pseudomonas putida (strain KT2440) GN=upp PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.609e-15
Identity = 46/95 (48.42%), Postives = 61/95 (64.21%), Query Frame = 1
Query:  124 EKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            EKL  DI++R  L++DP+LATG S    I LL + G  E  I  + L++APEGI  V K  P +KI T+ ID  LNE   ++PGLG+ GD+ FGT
Sbjct:  115 EKLAPDINQRLALIIDPMLATGGSMVATIDLLKKAGCKE--IRAMVLVAAPEGIEVVEKAHPDVKIYTASIDQRLNEHGYIVPGLGDAGDKIFGT 207          
The following BLAST results are available for this feature:
BLAST of DY257513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 481
Match NameE-valueIdentityDescription
UPP_BURTA1.232e-1534.59Uracil phosphoribosyltransferase OS=Burkholderia t... [more]
UPP_STRTD1.609e-1540.37Uracil phosphoribosyltransferase OS=Streptococcus ... [more]
UPP_STRT21.609e-1540.37Uracil phosphoribosyltransferase OS=Streptococcus ... [more]
UPP_STRT11.609e-1540.37Uracil phosphoribosyltransferase OS=Streptococcus ... [more]
UPP_STRA51.609e-1540.37Uracil phosphoribosyltransferase OS=Streptococcus ... [more]
UPP_STRA31.609e-1540.37Uracil phosphoribosyltransferase OS=Streptococcus ... [more]
UPP_STRA11.609e-1540.37Uracil phosphoribosyltransferase OS=Streptococcus ... [more]
UPP_RHOCS1.609e-1541.28Uracil phosphoribosyltransferase OS=Rhodospirillum... [more]
UPP_RHILO1.609e-1543.12Uracil phosphoribosyltransferase OS=Rhizobium loti... [more]
UPP_PSEPK1.609e-1548.42Uracil phosphoribosyltransferase OS=Pseudomonas pu... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAK2DG09FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257513 ID=DY257513; Name=DY257513; organism=Citrus sinensis; type=EST; length=633bp
GTTTCTACTGTGATGTTAAGTGGTGAAAGCATGGAAAATGCATTGCGTGC
ATGTTGCAAAGGAATAAAAATTGGAAAAATTCTGATTCACCGTGATGGGG
ACAATGGCAAACAGCTTATCTATGAGAAGCTGCCAAATGATATTTCAGAA
AGACATGTCCTGCTTCTAGATCCTGTTCTTGCCACAGGGAACTCTGCCAA
CCAAGCTATTCAACTACTCATAGAGAAAGGAGTTCCAGAATCCCACATAA
TATTCTTGAATCTCATCTCTGCTCCAGAGGGAATCCATTGTGTTTGCAAA
CGTTTTCCATCACTGAAAATTGTCACTTCAGAGATTGATGTTGCTTTGAA
TGAAGAATTCCGTGTGATACCTGGTCTGGGTGAGTTTGGCGACCGTTACT
TTGGCACTGATGATTGATAGGCTGAAGGTCAAGTAGTGGAGATTGTTAGC
TCTTATCAAATGGGTTGATTTCCCTAGAAATAACATAAATCAATATTTTG
AAAGCTGAGGGAGGCATGTTTCCTGAAAGACGAAAAATAAACAGAAAAGG
GGGGAAAAAAGTCTGAAGGGAGACCCCCACTTTGCAAAATATAATACAAA
TGCTGATTGTTCTCNNNNNNNAANAAAAAAAAA
back to top