DY257513

Overview
NameDY257513
Unique NameDY257513
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length633
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_DICT6 (Uracil phosphoribosyltransferase OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=upp PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.653e-18
Identity = 52/109 (47.71%), Postives = 71/109 (65.14%), Query Frame = 1 
Query:   85 IHRDGDNGKQL-IYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            ++RD +  K +  Y KLP DI +R V+++DP+LATG SA  AI +L  KGV +  I F+ +ISAPEGI  +    P + I T+ ID  LN+   +IPGLG+ GDR FGT
Sbjct:  100 LYRDPETLKPVQYYTKLPEDIDKREVIVVDPMLATGGSAVAAISILKAKGVKD--IKFVCIISAPEGIETLRNSHPDVDIYTAAIDERLNDHGYIIPGLGDAGDRLFGT 206
[Close]
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_DICTD (Uracil phosphoribosyltransferase OS=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) GN=upp PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.465e-18
Identity = 52/109 (47.71%), Postives = 71/109 (65.14%), Query Frame = 1 
Query:   85 IHRDGDNGKQL-IYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            ++RD +  K +  Y KLP DI +R V+++DP+LATG SA  AI +L  KGV   +I F+ +ISAPEGI  +    P + I T+ ID  LN+   +IPGLG+ GDR FGT
Sbjct:  100 LYRDPNTLKPVQYYTKLPEDIDKREVVVVDPMLATGGSAIAAISILKTKGV--KNIKFVCIISAPEGIEALKNSHPDVDIYTAAIDEKLNDHGYIIPGLGDAGDRLFGT 206
[Close]
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_PEDPA (Uracil phosphoribosyltransferase OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=upp PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 7.719e-18
Identity = 48/109 (44.04%), Postives = 72/109 (66.06%), Query Frame = 1 
Query:   85 IHRDGDNGKQLIY-EKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            ++RD +  K   Y  KLP+DISER V ++DP+LATG SA  A+  L ++G  +  I F +L++APEG+  + +  P + I T+ +D  LNE+  ++PGLG+ GDR FGT
Sbjct:  102 MYRDEETLKPTEYFVKLPSDISERQVFVVDPMLATGGSAIMAVDALKKRGAKD--IRFCSLVAAPEGVKALQEAHPDIDIYTAALDEKLNEDGYIVPGLGDAGDRLFGT 208
[Close]
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_LACLA (Uracil phosphoribosyltransferase OS=Lactococcus lactis subsp. lactis GN=upp PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.008e-17
Identity = 46/109 (42.20%), Postives = 71/109 (65.14%), Query Frame = 1 
Query:   85 IHRDGDNGKQLIY-EKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            ++RD +  K + Y  KLP DI++R + L+DP+LATG SA  A+  L ++     +I F+ L++APEG+  + K  P ++I T+ +D  LNE   ++PGLG+ GDR FGT
Sbjct:  102 MYRDEETLKPVEYLVKLPADIADRQIFLVDPMLATGGSAILAVDSLKKRNAKAENIKFVCLVAAPEGVKALQKAHPDIEIYTAALDEKLNEHGYIVPGLGDAGDRLFGT 210
[Close]
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_LACBA (Uracil phosphoribosyltransferase OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=upp PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.008e-17
Identity = 45/96 (46.88%), Postives = 67/96 (69.79%), Query Frame = 1 
Query:  121 YEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            + KLP+DI +R V ++DP+LATG SA  AI  L ++G   S+I F+ L+SAPEG+  + ++ P + I T+ +D  LNE+  ++PGLG+ GDR FGT
Sbjct:  115 FVKLPSDIGQRQVFVVDPMLATGGSAIMAIDALKKRGA--SNIKFVCLVSAPEGVKALREKHPDIDIYTAALDDRLNEDGYIVPGLGDAGDRLFGT 208
[Close]
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_CLOBM (Uracil phosphoribosyltransferase OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=upp PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.008e-17
Identity = 50/109 (45.87%), Postives = 69/109 (63.30%), Query Frame = 1 
Query:   85 IHRDGDNGKQLIYE-KLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            ++RD +  K + Y  KLP DI +R V++ DP+LATG SA  AI LL +KG    HI  + L++APEGI  V    P + I  + +D  LNE+  V+PGLG+ GDR +GT
Sbjct:  102 LYRDEETLKPVEYFCKLPQDIGDRDVIVTDPMLATGGSAKDAITLLKQKGA--KHIRLMCLVAAPEGIKEVMDEHPDVDIYVASVDEKLNEKGYVVPGLGDAGDRLYGT 208
[Close]
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_CLOBL (Uracil phosphoribosyltransferase OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=upp PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.008e-17
Identity = 50/109 (45.87%), Postives = 69/109 (63.30%), Query Frame = 1 
Query:   85 IHRDGDNGKQLIYE-KLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            ++RD +  K + Y  KLP DI +R V++ DP+LATG SA  AI LL +KG    HI  + L++APEGI  V    P + I  + +D  LNE+  V+PGLG+ GDR +GT
Sbjct:  102 LYRDEETLKPVEYFCKLPQDIGDRDVIVTDPMLATGGSAKDAITLLKQKGA--KHIRLMCLVAAPEGIKEVMDEHPDVDIYVASVDEKLNEKGYVVPGLGDAGDRLYGT 208
[Close]
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_CLOBK (Uracil phosphoribosyltransferase OS=Clostridium botulinum (strain Okra / Type B1) GN=upp PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.008e-17
Identity = 50/109 (45.87%), Postives = 69/109 (63.30%), Query Frame = 1 
Query:   85 IHRDGDNGKQLIYE-KLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            ++RD +  K + Y  KLP DI +R V++ DP+LATG SA  AI LL +KG    HI  + L++APEGI  V    P + I  + +D  LNE+  V+PGLG+ GDR +GT
Sbjct:  102 LYRDEETLKPVEYFCKLPQDIGDRDVIVTDPMLATGGSAKDAITLLKQKGA--KHIRLMCLVAAPEGIKEVMDEHPDVDIYVASVDEKLNEKGYVVPGLGDAGDRLYGT 208
[Close]
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_CLOBJ (Uracil phosphoribosyltransferase OS=Clostridium botulinum (strain Kyoto / Type A2) GN=upp PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.008e-17
Identity = 50/109 (45.87%), Postives = 69/109 (63.30%), Query Frame = 1 
Query:   85 IHRDGDNGKQLIYE-KLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            ++RD +  K + Y  KLP DI +R V++ DP+LATG SA  AI LL +KG    HI  + L++APEGI  V    P + I  + +D  LNE+  V+PGLG+ GDR +GT
Sbjct:  102 LYRDEETLKPVEYFCKLPQDIGDRDVIVTDPMLATGGSAKDAITLLKQKGA--KHIRLMCLVAAPEGIKEVMDEHPDVDIYVASVDEKLNEKGYVVPGLGDAGDRLYGT 208
[Close]
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_CLOBH (Uracil phosphoribosyltransferase OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=upp PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.008e-17
Identity = 50/109 (45.87%), Postives = 69/109 (63.30%), Query Frame = 1 
Query:   85 IHRDGDNGKQLIYE-KLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            ++RD +  K + Y  KLP DI +R V++ DP+LATG SA  AI LL +KG    HI  + L++APEGI  V    P + I  + +D  LNE+  V+PGLG+ GDR +GT
Sbjct:  102 LYRDEETLKPVEYFCKLPQDIGDRDVIVTDPMLATGGSAKDAITLLKQKGA--KHIRLMCLVAAPEGIKEVMDEHPDVDIYVASVDEKLNEKGYVVPGLGDAGDRLYGT 208
The following BLAST results are available for this feature:
BLAST of DY257513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 481
Match NameE-valueIdentityDescription
UPP_DICT62.653e-1847.71Uracil phosphoribosyltransferase OS=Dictyoglomus t... [more]
UPP_DICTD3.465e-1847.71Uracil phosphoribosyltransferase OS=Dictyoglomus t... [more]
UPP_PEDPA7.719e-1844.04Uracil phosphoribosyltransferase OS=Pediococcus pe... [more]
UPP_LACLA1.008e-1742.20Uracil phosphoribosyltransferase OS=Lactococcus la... [more]
UPP_LACBA1.008e-1746.88Uracil phosphoribosyltransferase OS=Lactobacillus ... [more]
UPP_CLOBM1.008e-1745.87Uracil phosphoribosyltransferase OS=Clostridium bo... [more]
UPP_CLOBL1.008e-1745.87Uracil phosphoribosyltransferase OS=Clostridium bo... [more]
UPP_CLOBK1.008e-1745.87Uracil phosphoribosyltransferase OS=Clostridium bo... [more]
UPP_CLOBJ1.008e-1745.87Uracil phosphoribosyltransferase OS=Clostridium bo... [more]
UPP_CLOBH1.008e-1745.87Uracil phosphoribosyltransferase OS=Clostridium bo... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK2DG09FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257513 ID=DY257513; Name=DY257513; organism=Citrus sinensis; type=EST; length=633bp
GTTTCTACTGTGATGTTAAGTGGTGAAAGCATGGAAAATGCATTGCGTGC
ATGTTGCAAAGGAATAAAAATTGGAAAAATTCTGATTCACCGTGATGGGG
ACAATGGCAAACAGCTTATCTATGAGAAGCTGCCAAATGATATTTCAGAA
AGACATGTCCTGCTTCTAGATCCTGTTCTTGCCACAGGGAACTCTGCCAA
CCAAGCTATTCAACTACTCATAGAGAAAGGAGTTCCAGAATCCCACATAA
TATTCTTGAATCTCATCTCTGCTCCAGAGGGAATCCATTGTGTTTGCAAA
CGTTTTCCATCACTGAAAATTGTCACTTCAGAGATTGATGTTGCTTTGAA
TGAAGAATTCCGTGTGATACCTGGTCTGGGTGAGTTTGGCGACCGTTACT
TTGGCACTGATGATTGATAGGCTGAAGGTCAAGTAGTGGAGATTGTTAGC
TCTTATCAAATGGGTTGATTTCCCTAGAAATAACATAAATCAATATTTTG
AAAGCTGAGGGAGGCATGTTTCCTGAAAGACGAAAAATAAACAGAAAAGG
GGGGAAAAAAGTCTGAAGGGAGACCCCCACTTTGCAAAATATAATACAAA
TGCTGATTGTTCTCNNNNNNNAANAAAAAAAAA
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