DY257513

Overview
NameDY257513
Unique NameDY257513
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length633
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_CLOB6 (Uracil phosphoribosyltransferase OS=Clostridium botulinum (strain 657 / Type Ba4) GN=upp PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.008e-17
Identity = 50/109 (45.87%), Postives = 69/109 (63.30%), Query Frame = 1
Query:   85 IHRDGDNGKQLIYE-KLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            ++RD +  K + Y  KLP DI +R V++ DP+LATG SA  AI LL +KG    HI  + L++APEGI  V    P + I  + +D  LNE+  V+PGLG+ GDR +GT
Sbjct:  102 LYRDEETLKPVEYFCKLPQDIGDRDVIVTDPMLATGGSAKDAITLLKQKGA--KHIRLMCLVAAPEGIKEVMDEHPDVDIYVASVDEKLNEKGYVVPGLGDAGDRLYGT 208          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_CLOB1 (Uracil phosphoribosyltransferase OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=upp PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.008e-17
Identity = 50/109 (45.87%), Postives = 69/109 (63.30%), Query Frame = 1
Query:   85 IHRDGDNGKQLIYE-KLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            ++RD +  K + Y  KLP DI +R V++ DP+LATG SA  AI LL +KG    HI  + L++APEGI  V    P + I  + +D  LNE+  V+PGLG+ GDR +GT
Sbjct:  102 LYRDEETLKPVEYFCKLPQDIGDRDVIVTDPMLATGGSAKDAITLLKQKGA--KHIRLMCLVAAPEGIKEVMDEHPDVDIYVASVDEKLNEKGYVVPGLGDAGDRLYGT 208          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_STRSY (Uracil phosphoribosyltransferase OS=Streptococcus suis (strain 05ZYH33) GN=upp PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.317e-17
Identity = 50/134 (37.31%), Postives = 80/134 (59.70%), Query Frame = 1
Query:   10 VMLSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLIY-EKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            ++ +G  M + L +           ++RD +  + + Y  KLP DI +RH+ ++DP+LATG SA  A+  L ++G   S+I F+ L+SAPEG+  +    P + I T+ +D  LNE+  ++PGLG+ GDR FGT
Sbjct:   77 ILRAGVGMVDGLLSLVPAAKVGHIGMYRDEETLQPVEYLVKLPEDIDQRHIFVVDPMLATGGSAILAVDSLKKRGA--SNIKFVALVSAPEGVKALQDAHPDIDIYTAALDEKLNEKGYIVPGLGDAGDRLFGT 208          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_OCEIH (Uracil phosphoribosyltransferase OS=Oceanobacillus iheyensis GN=upp PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.317e-17
Identity = 50/134 (37.31%), Postives = 79/134 (58.96%), Query Frame = 1
Query:   10 VMLSGESMENALRAXXXXXXXXXXLIHRDGDNGKQL-IYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            ++ +G  M + +R            ++RD +  K +  Y KLPNDI ER ++++DP+LATG SAN AI  + ++G    +I  + LI+APEG+  V +  P + I  + +D  L++   +IPGLG+ GDR FGT
Sbjct:   77 ILRAGLGMVDGVRKLIPAAKVGHVGLYRDPETFKPVEYYVKLPNDIEEREIIVIDPMLATGGSANDAIAAIKKRGA--KNIRLMCLIAAPEGVEVVKEAHPDVDIYLAAMDERLDDHGYIIPGLGDAGDRLFGT 208          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_CAMC1 (Uracil phosphoribosyltransferase OS=Campylobacter concisus (strain 13826) GN=upp PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.317e-17
Identity = 43/99 (43.43%), Postives = 66/99 (66.67%), Query Frame = 1
Query:  112 QLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            +  Y KLP D  ER  +++DP+ ATG +A  A++ L EKGV E  I F+++I+APEG+    + +P +++ T+ ID  LNE+  ++PGLG+ GDR F T
Sbjct:  111 EFFYAKLPKDAKERMAIIIDPMFATGGTAIDAVKFLREKGVKE--IKFISIIAAPEGLKRFSEIYPDVEVYTASIDEKLNEKNYIVPGLGDAGDRVFNT 207          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_RALPJ (Uracil phosphoribosyltransferase OS=Ralstonia pickettii (strain 12J) GN=upp PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.720e-17
Identity = 48/136 (35.29%), Postives = 78/136 (57.35%), Query Frame = 1
Query:    1 VSTVMLSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            V  V+ +G  M + L             ++RD  +       +LP D+ +R  +L DP++ATG SA  A+ ++ ++GVP+ +I+FL L++APEG+    K  P +K+  + +D  L+E   +IPGLG+ GDR FGT
Sbjct:   80 VVPVLRAGVGMSDGLVELIPSARIGHIGVYRDDQHRPVEYLVRLP-DLEDRTFILCDPMVATGYSAVHAVDVMKKRGVPDENILFLALVAAPEGVEVFQKAHPGVKLFVASLDSHLDENAYIIPGLGDAGDRLFGT 214          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_CLOBB (Uracil phosphoribosyltransferase OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=upp PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.720e-17
Identity = 49/109 (44.95%), Postives = 72/109 (66.06%), Query Frame = 1
Query:   85 IHRDGDNGKQLIYE-KLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            ++RD +  + + Y  KLP DI ER V+++DP+LATG SA  A+ +L EKG    ++  + LISAPEGI  V ++ P + I  + ID  LNE+  ++PGLG+ GDR +GT
Sbjct:  102 LYRDEETLQPVEYFCKLPKDIEERDVIVVDPMLATGGSAADALTMLKEKGA--KNLKLMCLISAPEGIKLVQEKHPDVDIYVASIDEKLNEKGYIVPGLGDAGDRLYGT 208          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_CLOBA (Uracil phosphoribosyltransferase OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=upp PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.720e-17
Identity = 49/109 (44.95%), Postives = 72/109 (66.06%), Query Frame = 1
Query:   85 IHRDGDNGKQLIYE-KLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            ++RD +  + + Y  KLP DI ER V+++DP+LATG SA  A+ +L EKG    ++  + LISAPEGI  V ++ P + I  + ID  LNE+  ++PGLG+ GDR +GT
Sbjct:  102 LYRDEETLQPVEYFCKLPKDIEERDVIVVDPMLATGGSAADALTMLKEKGA--KNLKLMCLISAPEGIKLVQEKHPDVDIYVASIDEKLNEKGYIVPGLGDAGDRLYGT 208          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_STRSV (Uracil phosphoribosyltransferase OS=Streptococcus sanguinis (strain SK36) GN=upp PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.246e-17
Identity = 47/109 (43.12%), Postives = 71/109 (65.14%), Query Frame = 1
Query:   85 IHRDGDNGKQLIY-EKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            ++RD +  K + Y  KLP DI +R + ++DP+LATG SA  A+  L ++G   SHI F+ L+SAPEG+  + +  P + I T+ +D  LN+   ++PGLG+ GDR FGT
Sbjct:  102 MYRDEETLKPVEYLVKLPEDIDQRQIFVVDPMLATGGSAILAVDSLKKRGA--SHITFVCLVSAPEGVKALQEAHPDVDIFTAALDDHLNDHGYIVPGLGDAGDRLFGT 208          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_STRGC (Uracil phosphoribosyltransferase OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=upp PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.246e-17
Identity = 47/109 (43.12%), Postives = 71/109 (65.14%), Query Frame = 1
Query:   85 IHRDGDNGKQLIY-EKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            ++RD +  K + Y  KLP DI +R + ++DP+LATG SA  A+  L ++G   SHI F+ L+SAPEG+  + +  P + I T+ +D  LN+   ++PGLG+ GDR FGT
Sbjct:  102 MYRDEETLKPVEYLVKLPEDIDQRQIFVVDPMLATGGSAILAVDSLKKRGA--SHITFVCLVSAPEGVKALQEAHPDVDIFTAALDDHLNDHGYIVPGLGDAGDRLFGT 208          
The following BLAST results are available for this feature:
BLAST of DY257513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 481
Match NameE-valueIdentityDescription
UPP_CLOB61.008e-1745.87Uracil phosphoribosyltransferase OS=Clostridium bo... [more]
UPP_CLOB11.008e-1745.87Uracil phosphoribosyltransferase OS=Clostridium bo... [more]
UPP_STRSY1.317e-1737.31Uracil phosphoribosyltransferase OS=Streptococcus ... [more]
UPP_OCEIH1.317e-1737.31Uracil phosphoribosyltransferase OS=Oceanobacillus... [more]
UPP_CAMC11.317e-1743.43Uracil phosphoribosyltransferase OS=Campylobacter ... [more]
UPP_RALPJ1.720e-1735.29Uracil phosphoribosyltransferase OS=Ralstonia pick... [more]
UPP_CLOBB1.720e-1744.95Uracil phosphoribosyltransferase OS=Clostridium bo... [more]
UPP_CLOBA1.720e-1744.95Uracil phosphoribosyltransferase OS=Clostridium bo... [more]
UPP_STRSV2.246e-1743.12Uracil phosphoribosyltransferase OS=Streptococcus ... [more]
UPP_STRGC2.246e-1743.12Uracil phosphoribosyltransferase OS=Streptococcus ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAK2DG09FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257513 ID=DY257513; Name=DY257513; organism=Citrus sinensis; type=EST; length=633bp
GTTTCTACTGTGATGTTAAGTGGTGAAAGCATGGAAAATGCATTGCGTGC
ATGTTGCAAAGGAATAAAAATTGGAAAAATTCTGATTCACCGTGATGGGG
ACAATGGCAAACAGCTTATCTATGAGAAGCTGCCAAATGATATTTCAGAA
AGACATGTCCTGCTTCTAGATCCTGTTCTTGCCACAGGGAACTCTGCCAA
CCAAGCTATTCAACTACTCATAGAGAAAGGAGTTCCAGAATCCCACATAA
TATTCTTGAATCTCATCTCTGCTCCAGAGGGAATCCATTGTGTTTGCAAA
CGTTTTCCATCACTGAAAATTGTCACTTCAGAGATTGATGTTGCTTTGAA
TGAAGAATTCCGTGTGATACCTGGTCTGGGTGAGTTTGGCGACCGTTACT
TTGGCACTGATGATTGATAGGCTGAAGGTCAAGTAGTGGAGATTGTTAGC
TCTTATCAAATGGGTTGATTTCCCTAGAAATAACATAAATCAATATTTTG
AAAGCTGAGGGAGGCATGTTTCCTGAAAGACGAAAAATAAACAGAAAAGG
GGGGAAAAAAGTCTGAAGGGAGACCCCCACTTTGCAAAATATAATACAAA
TGCTGATTGTTCTCNNNNNNNAANAAAAAAAAA
back to top