DY257513

Overview
NameDY257513
Unique NameDY257513
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length633
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_MACFA (Uracil phosphoribosyltransferase OS=Macaca fascicularis GN=UPRT PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.933e-17
Identity = 53/136 (38.97%), Postives = 76/136 (55.88%), Query Frame = 1
Query:    7 TVMLSGESMENALRAXXXXXXXXXXLIHRDGDNGK-QLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGTD 411
            ++M SGE+ME  LR           LI  D +  + ++ Y K P DI  R VLL+ P+L+TGN+  +A+++LIE GV  S II L+L S P G   + + FP + I+T+E+         V P    FG +YFGTD
Sbjct:  183 SIMRSGEAMEQGLRDCCRSIRIGKILIQSDEETQRAKVYYAKFPPDIYRRKVLLMYPILSTGNTVIEAVKVLIEHGVQPSVIILLSLFSTPHGAKSIIQEFPEITILTTEV-------HPVAP--THFGQKYFGTD 309          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_LACLM (Uracil phosphoribosyltransferase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=upp PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.933e-17
Identity = 45/109 (41.28%), Postives = 71/109 (65.14%), Query Frame = 1
Query:   85 IHRDGDNGKQLIY-EKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            ++RD +  K + Y  KLP DI++R + L+DP+LATG SA  A+  L ++     +I F+ L++APEG+  + +  P ++I T+ +D  LNE   ++PGLG+ GDR FGT
Sbjct:  102 MYRDEETLKPVEYLVKLPADIADRQIFLVDPMLATGGSAILAVDSLKKRNAKAENIKFVCLVAAPEGVKALQEAHPDIEIYTAALDEKLNEHGYIVPGLGDAGDRLFGT 210          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_HUMAN (Uracil phosphoribosyltransferase OS=Homo sapiens GN=UPRT PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.933e-17
Identity = 53/136 (38.97%), Postives = 76/136 (55.88%), Query Frame = 1
Query:    7 TVMLSGESMENALRAXXXXXXXXXXLIHRDGDNGK-QLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGTD 411
            ++M SGE+ME  LR           LI  D +  + ++ Y K P DI  R VLL+ P+L+TGN+  +A+++LIE GV  S II L+L S P G   + + FP + I+T+E+         V P    FG +YFGTD
Sbjct:  183 SIMRSGEAMEQGLRDCCRSIRIGKILIQSDEETQRAKVYYAKFPPDIYRRKVLLMYPILSTGNTVIEAVKVLIEHGVQPSVIILLSLFSTPHGAKSIIQEFPEITILTTEV-------HPVAP--THFGQKYFGTD 309          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_CHICK (Uracil phosphoribosyltransferase OS=Gallus gallus GN=UPRT PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.933e-17
Identity = 53/136 (38.97%), Postives = 76/136 (55.88%), Query Frame = 1
Query:    7 TVMLSGESMENALRAXXXXXXXXXXLIHRDGDNGK-QLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGTD 411
            ++M SGE+ME  LR           LI  D +  + ++ Y K P DI  R VLL+ P+L+TGN+  +A+++LIE GV  S II L+L S P G   + + FP + I+T+E+         V P    FG +YFGTD
Sbjct:  151 SIMRSGEAMEQGLRDCCRSIRIGKILIQSDEETQRAKVYYAKFPPDIYRRKVLLMYPILSTGNTVIEAVKVLIEHGVQPSVIILLSLFSTPHGAKSIIQEFPEITILTTEV-------HPVAP--THFGQKYFGTD 277          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_BOVIN (Uracil phosphoribosyltransferase OS=Bos taurus GN=UPRT PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.933e-17
Identity = 53/136 (38.97%), Postives = 76/136 (55.88%), Query Frame = 1
Query:    7 TVMLSGESMENALRAXXXXXXXXXXLIHRDGDNGK-QLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGTD 411
            ++M SGE+ME  LR           LI  D +  + ++ Y K P DI  R VLL+ P+L+TGN+  +A+++LIE GV  S II L+L S P G   + + FP + I+T+E+         V P    FG +YFGTD
Sbjct:  180 SIMRSGEAMEQGLRDCCRSIRIGKILIQSDEETQRAKVYYAKFPPDIYRRKVLLMYPILSTGNTVIEAVKVLIEHGVQPSVIILLSLFSTPHGAKSIIQEFPEITILTTEV-------HPVAP--THFGQKYFGTD 306          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_LACLS (Uracil phosphoribosyltransferase OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=upp PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.003e-17
Identity = 45/109 (41.28%), Postives = 71/109 (65.14%), Query Frame = 1
Query:   85 IHRDGDNGKQLIY-EKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            ++RD +  K + Y  KLP DI++R + L+DP+LATG SA  A+  L ++     +I F+ L++APEG+  + +  P ++I T+ +D  LNE   ++PGLG+ GDR FGT
Sbjct:  102 MYRDEETLKPVEYLVKLPADIADRQIFLVDPMLATGGSAILAVDSLKKRNSKAENIKFVCLVAAPEGVKALQEAHPDIEIYTAALDEKLNEHGYIVPGLGDAGDRLFGT 210          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_BACSK (Uracil phosphoribosyltransferase OS=Bacillus clausii (strain KSM-K16) GN=upp PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.003e-17
Identity = 44/96 (45.83%), Postives = 63/96 (65.62%), Query Frame = 1
Query:  121 YEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            Y KLPND+ ER +L++DP+LATG S  +AI  L ++G     +I L  ++APEG+  V K  P + I  + +D  LNE+  ++PGLG+ GDR FGT
Sbjct:  115 YVKLPNDVEERELLVIDPMLATGGSVVEAINSLKKRGAKSMRLICL--VAAPEGVAYVQKEHPDVDIYLAALDEKLNEKGYIVPGLGDAGDRLFGT 208          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_BACLD (Uracil phosphoribosyltransferase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=upp PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.003e-17
Identity = 47/109 (43.12%), Postives = 72/109 (66.06%), Query Frame = 1
Query:   85 IHRDGDNGKQL-IYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            ++RD +  K +  Y KLP+D+ ER  +++DP+LATG SA +A+  L ++G    +I F+ LI+APEG+  V K  P + I  + +D  LNE+  ++PGLG+ GDR FGT
Sbjct:  102 LYRDPETLKPVEYYVKLPSDVEEREFIVVDPMLATGGSAVEALNSLKKRGA--KNIRFMCLIAAPEGVDEVQKHHPDVDIYIAALDEKLNEKGYIVPGLGDAGDRMFGT 208          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_WOLSU (Uracil phosphoribosyltransferase OS=Wolinella succinogenes GN=upp PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 6.534e-17
Identity = 47/96 (48.96%), Postives = 62/96 (64.58%), Query Frame = 1
Query:  121 YEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            Y KLP DI++R V L+DP+LATG SA  AI  L  +GVP+  + FL +++APEGI  V    P + I  ++ID  L E   + PGLG+ GDR FGT
Sbjct:  114 YCKLPEDIAKRSVFLVDPMLATGGSAIYAIDYLKSQGVPK--VTFLCILAAPEGIKAVTTAHPDVDIFIAKIDERLTEHGYIFPGLGDAGDRVFGT 207          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_THET8 (Uracil phosphoribosyltransferase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=upp PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 6.534e-17
Identity = 43/96 (44.79%), Postives = 64/96 (66.67%), Query Frame = 1
Query:  121 YEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            Y KLP DI+ER   LLDP+LATG SA+ A+ LL E+G   + +  + +++APEG+  + K  P  ++V + ID  LN+   ++PGLG+ GDR +GT
Sbjct:  114 YIKLPPDIAERRAFLLDPMLATGGSASLALSLLKERGA--TGVKLMAILAAPEGLERIAKDHPDTEVVVAAIDERLNDHGYIVPGLGDAGDRIYGT 207          
The following BLAST results are available for this feature:
BLAST of DY257513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 481
Match NameE-valueIdentityDescription
UPP_MACFA2.933e-1738.97Uracil phosphoribosyltransferase OS=Macaca fascicu... [more]
UPP_LACLM2.933e-1741.28Uracil phosphoribosyltransferase OS=Lactococcus la... [more]
UPP_HUMAN2.933e-1738.97Uracil phosphoribosyltransferase OS=Homo sapiens G... [more]
UPP_CHICK2.933e-1738.97Uracil phosphoribosyltransferase OS=Gallus gallus ... [more]
UPP_BOVIN2.933e-1738.97Uracil phosphoribosyltransferase OS=Bos taurus GN=... [more]
UPP_LACLS5.003e-1741.28Uracil phosphoribosyltransferase OS=Lactococcus la... [more]
UPP_BACSK5.003e-1745.83Uracil phosphoribosyltransferase OS=Bacillus claus... [more]
UPP_BACLD5.003e-1743.12Uracil phosphoribosyltransferase OS=Bacillus liche... [more]
UPP_WOLSU6.534e-1748.96Uracil phosphoribosyltransferase OS=Wolinella succ... [more]
UPP_THET86.534e-1744.79Uracil phosphoribosyltransferase OS=Thermus thermo... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAK2DG09FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257513 ID=DY257513; Name=DY257513; organism=Citrus sinensis; type=EST; length=633bp
GTTTCTACTGTGATGTTAAGTGGTGAAAGCATGGAAAATGCATTGCGTGC
ATGTTGCAAAGGAATAAAAATTGGAAAAATTCTGATTCACCGTGATGGGG
ACAATGGCAAACAGCTTATCTATGAGAAGCTGCCAAATGATATTTCAGAA
AGACATGTCCTGCTTCTAGATCCTGTTCTTGCCACAGGGAACTCTGCCAA
CCAAGCTATTCAACTACTCATAGAGAAAGGAGTTCCAGAATCCCACATAA
TATTCTTGAATCTCATCTCTGCTCCAGAGGGAATCCATTGTGTTTGCAAA
CGTTTTCCATCACTGAAAATTGTCACTTCAGAGATTGATGTTGCTTTGAA
TGAAGAATTCCGTGTGATACCTGGTCTGGGTGAGTTTGGCGACCGTTACT
TTGGCACTGATGATTGATAGGCTGAAGGTCAAGTAGTGGAGATTGTTAGC
TCTTATCAAATGGGTTGATTTCCCTAGAAATAACATAAATCAATATTTTG
AAAGCTGAGGGAGGCATGTTTCCTGAAAGACGAAAAATAAACAGAAAAGG
GGGGAAAAAAGTCTGAAGGGAGACCCCCACTTTGCAAAATATAATACAAA
TGCTGATTGTTCTCNNNNNNNAANAAAAAAAAA
back to top