DY257513

Overview
NameDY257513
Unique NameDY257513
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length633
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_THENN (Uracil phosphoribosyltransferase OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=upp PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.356e-13
Identity = 44/109 (40.37%), Postives = 67/109 (61.47%), Query Frame = 1
Query:   85 IHRDGDNGKQL-IYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            I+RD +  + +  Y KLP    ++ V LLDP+LATG S+ +A+ +L E G  +  I  + LI+APEG+  V ++   +KI  + +D  LN+   +IPGLG+ GDR F T
Sbjct:  102 IYRDPETLRAVEYYAKLPPLDGDKEVFLLDPMLATGVSSVKALDILKENGARK--ITLVALIAAPEGVEAVEEKHSDVKIYVAALDERLNDHGYIIPGLGDAGDRLFRT 208          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_STAS1 (Uracil phosphoribosyltransferase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=upp PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.356e-13
Identity = 43/109 (39.45%), Postives = 67/109 (61.47%), Query Frame = 1
Query:   85 IHRDGDNGKQLIY-EKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            ++RD +  + + Y  KLP DI ER ++++DP+LATG SA +AI  L ++G    +I F+ LI+APEG+  +      + I  + +D  L+    + PGLG+ GDR FGT
Sbjct:  102 LYRDPETLEAVEYFVKLPQDIEEREIVVVDPMLATGASAIEAINSLKKRGA--KNIRFMCLIAAPEGVEKLQAAHEDVDIFIAALDEKLDNHAYITPGLGDAGDRLFGT 208          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_CAUSK (Uracil phosphoribosyltransferase OS=Caulobacter sp. (strain K31) GN=upp PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.356e-13
Identity = 38/96 (39.58%), Postives = 63/96 (65.62%), Query Frame = 1
Query:  121 YEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            Y K P+DI++R V+++DP+LATG++A  AI  L   GV +  + F+ L+++ +G+  +    P + I T+ +D  LN+   ++PGLG+ GDR FGT
Sbjct:  115 YYKTPDDIADRLVIVVDPMLATGHTAVAAIARLKRSGVTD--LRFVCLVASVQGVETLRAAHPDVPIWTAAVDAELNDHGYIVPGLGDAGDRTFGT 208          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_ARTAT (Uracil phosphoribosyltransferase OS=Arthrobacter aurescens (strain TC1) GN=upp PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.356e-13
Identity = 38/96 (39.58%), Postives = 64/96 (66.67%), Query Frame = 1
Query:  124 EKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRF--PSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFG 405
            E+LP D++ R + +LDP+LATG +  +AI+ L ++G   S +  + L++APEG+  + +     ++KIV + ID  LNE+  ++PGLG+ GDR +G
Sbjct:  115 ERLPEDLTGRQIFVLDPMLATGGTLREAIKFLFKRGA--SDVTCICLLAAPEGLSKLEEELSDANVKIVLASIDEKLNEKSYIVPGLGDAGDRLYG 208          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_ACHLI (Uracil phosphoribosyltransferase OS=Acholeplasma laidlawii (strain PG-8A) GN=upp PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.356e-13
Identity = 40/96 (41.67%), Postives = 57/96 (59.38%), Query Frame = 1
Query:  121 YEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            Y K P DI +  VL++DP+LATG SA  AI  L  +G  +  + F+ L+  PEG+  +    P + I  + +D  LNE   ++PGLG+ GDR FGT
Sbjct:  114 YAKFPTDILDGVVLVVDPMLATGGSATAAITELKNRGAKD--VRFVGLVGCPEGVKRLQMDHPDVPIYLAALDEKLNEVGYIVPGLGDAGDRLFGT 207          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_SYNY3 (Uracil phosphoribosyltransferase OS=Synechocystis sp. (strain PCC 6803) GN=upp PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.383e-13
Identity = 39/99 (39.39%), Postives = 61/99 (61.62%), Query Frame = 1
Query:  115 LIYEKLPNDISE-RHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            L   KLP   +   H+LLLDP+LATGN+   A+ LL+ + +  + I  +++++AP  +  +    P+L I T+ ID  LN+   ++PGLG+ GDR FGT
Sbjct:  118 LYLNKLPERFAPGTHLLLLDPMLATGNTIMAALDLLMARDIDANLIRLVSVVAAPTALQKLSNAHPNLTIYTAMIDEQLNDRGYIVPGLGDAGDRCFGT 216          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_MYCGA (Uracil phosphoribosyltransferase OS=Mycoplasma gallisepticum GN=upp PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.383e-13
Identity = 40/98 (40.82%), Postives = 61/98 (62.24%), Query Frame = 1
Query:  121 YEKLPNDISERHVLLLDPVLATGNSANQAIQLL--IEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            Y K P  + + HV++LDP+LATG S  +AI L+  I+   P S I F+ L+ APEG+  + +  P + +  + +D  LN++  + PGLG+ GDR FGT
Sbjct:  114 YSKFPQTMDDGHVIVLDPMLATGASVIKAISLVKNIQPKKPRS-IKFMGLLGAPEGLKALNQAHPDVDVYLACLDEKLNDKNYIYPGLGDAGDRIFGT 210          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_GEOLS (Uracil phosphoribosyltransferase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=upp PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.383e-13
Identity = 38/96 (39.58%), Postives = 56/96 (58.33%), Query Frame = 1
Query:  121 YEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            YEK   D+ ER  L++DP+LATG S    I++L   G      +FL  ++ PEG+  +    P ++I  + ID  LNE   ++PGLG+ GD+ FGT
Sbjct:  114 YEKFTTDMEERTALIIDPMLATGGSLLATIEMLKATGCRRIKGLFL--VAVPEGLEKISSAHPDVEIYVASIDERLNEHGYILPGLGDAGDKIFGT 207          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_FERNB (Uracil phosphoribosyltransferase OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=upp PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.383e-13
Identity = 44/109 (40.37%), Postives = 65/109 (59.63%), Query Frame = 1
Query:   85 IHRDGDNGKQL-IYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            I+RD +  K +  Y K P    +  + +LDP+LATG SA  AI  + E G  +  I F++LIS+PEG+  + K  P + I T+ +D  LN+   ++PGLG+ GDR F T
Sbjct:  100 IYRDPETLKAVDYYFKTPKLHDKSEIFILDPMLATGVSAIDAITKVKELGGKQ--ITFISLISSPEGVKAIEKAHPDVNIYTASLDRELNDHGYILPGLGDAGDRLFRT 206          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_CORK4 (Uracil phosphoribosyltransferase OS=Corynebacterium kroppenstedtii (strain DSM 44385 / CCUG 35717) GN=upp PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.383e-13
Identity = 43/107 (40.19%), Postives = 66/107 (61.68%), Query Frame = 1
Query:   91 RDGDNGKQLIY-EKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCV-CKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFG 405
            RD    K + Y E LP+D+S R V L+DP+LATG S   AI+LL  +G  +  I  + +++A  G+  +     P  ++VT+ ID +LNE+  ++PGLG+ GDR +G
Sbjct:  102 RDETTHKPVPYLEALPDDLSGRPVFLVDPMLATGGSLLHAIRLLASRGADD--ITCICMVAAEPGVQALKAADLPVTRLVTATIDPSLNEDAYIVPGLGDAGDRLYG 206          
The following BLAST results are available for this feature:
BLAST of DY257513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 481
Match NameE-valueIdentityDescription
UPP_THENN3.356e-1340.37Uracil phosphoribosyltransferase OS=Thermotoga nea... [more]
UPP_STAS13.356e-1339.45Uracil phosphoribosyltransferase OS=Staphylococcus... [more]
UPP_CAUSK3.356e-1339.58Uracil phosphoribosyltransferase OS=Caulobacter sp... [more]
UPP_ARTAT3.356e-1339.58Uracil phosphoribosyltransferase OS=Arthrobacter a... [more]
UPP_ACHLI3.356e-1341.67Uracil phosphoribosyltransferase OS=Acholeplasma l... [more]
UPP_SYNY34.383e-1339.39Uracil phosphoribosyltransferase OS=Synechocystis ... [more]
UPP_MYCGA4.383e-1340.82Uracil phosphoribosyltransferase OS=Mycoplasma gal... [more]
UPP_GEOLS4.383e-1339.58Uracil phosphoribosyltransferase OS=Geobacter lovl... [more]
UPP_FERNB4.383e-1340.37Uracil phosphoribosyltransferase OS=Fervidobacteri... [more]
UPP_CORK44.383e-1340.19Uracil phosphoribosyltransferase OS=Corynebacteriu... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK2DG09FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257513 ID=DY257513; Name=DY257513; organism=Citrus sinensis; type=EST; length=633bp
GTTTCTACTGTGATGTTAAGTGGTGAAAGCATGGAAAATGCATTGCGTGC
ATGTTGCAAAGGAATAAAAATTGGAAAAATTCTGATTCACCGTGATGGGG
ACAATGGCAAACAGCTTATCTATGAGAAGCTGCCAAATGATATTTCAGAA
AGACATGTCCTGCTTCTAGATCCTGTTCTTGCCACAGGGAACTCTGCCAA
CCAAGCTATTCAACTACTCATAGAGAAAGGAGTTCCAGAATCCCACATAA
TATTCTTGAATCTCATCTCTGCTCCAGAGGGAATCCATTGTGTTTGCAAA
CGTTTTCCATCACTGAAAATTGTCACTTCAGAGATTGATGTTGCTTTGAA
TGAAGAATTCCGTGTGATACCTGGTCTGGGTGAGTTTGGCGACCGTTACT
TTGGCACTGATGATTGATAGGCTGAAGGTCAAGTAGTGGAGATTGTTAGC
TCTTATCAAATGGGTTGATTTCCCTAGAAATAACATAAATCAATATTTTG
AAAGCTGAGGGAGGCATGTTTCCTGAAAGACGAAAAATAAACAGAAAAGG
GGGGAAAAAAGTCTGAAGGGAGACCCCCACTTTGCAAAATATAATACAAA
TGCTGATTGTTCTCNNNNNNNAANAAAAAAAAA
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