DY257513

Overview
NameDY257513
Unique NameDY257513
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length633
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_CLAM3 (Uracil phosphoribosyltransferase OS=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) GN=upp PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.405e-11
Identity = 39/97 (40.21%), Postives = 58/97 (59.79%), Query Frame = 1
Query:  124 EKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCV--CKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            E+LP D+S R   ++DP+LATG S   AI+ L ++G  +  +  + LI+APEG+  V        + IV   +D  L+E   +IPGLG+ GDR +GT
Sbjct:  115 ERLPTDLSNRQCFVVDPMLATGGSLIAAIEYLFDRGAVD--VTCICLIAAPEGLKAVEEATAGREVTIVLGALDERLDEVGYIIPGLGDAGDRLYGT 209          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_MYCHO (Uracil phosphoribosyltransferase OS=Mycoplasma hominis GN=upp PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.141e-11
Identity = 37/94 (39.36%), Postives = 59/94 (62.77%), Query Frame = 1
Query:  127 KLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            K+P    + +++++DP+LATG+SA  AI  L + G   ++I  + L+   +GI  V K+FP++ I  +  D  LNE   ++PGLG+ GDR FGT
Sbjct:  115 KIPEVPHDSYIIIVDPMLATGSSACDAIAKLDKLGF--NNIKLVCLVGVQQGIDKVTKQFPNVDIYLASKDEKLNEHNYILPGLGDAGDRIFGT 206          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_METM7 (Probable uracil phosphoribosyltransferase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=upp PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.141e-11
Identity = 37/99 (37.37%), Postives = 64/99 (64.65%), Query Frame = 1
Query:  112 QLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIE-KGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFG 405
            ++ Y K+P   SE  V++ DP++ATG++    I++L E K      ++ + +++APEGI+ V   FP ++I  ++ID  LN++  ++PGLG+ GDR FG
Sbjct:  121 EMNYIKVPQLNSEDTVIISDPMIATGSTL---IRVLNEFKDSKPKRMLIVGVLAAPEGINAVKAEFPDVEIFVTKIDEKLNKDGYIVPGLGDAGDRAFG 216          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_BRAJA (Uracil phosphoribosyltransferase OS=Bradyrhizobium japonicum GN=upp PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.141e-11
Identity = 37/94 (39.36%), Postives = 58/94 (61.70%), Query Frame = 1
Query:  127 KLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            K P+D+ ER  +++ PV+AT N+A  AI  L E+G  +  +  L  I+APEG+  +    P + I T+ +D  L+E   ++PGLG+ GDR +GT
Sbjct:  117 KSPSDLGERLAIVVTPVVATANTAVAAIDRLKERGAKDIRLACL--IAAPEGLERLRGLHPDVPIWTAAVDEGLDENGFILPGLGDAGDRAYGT 208          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_ANASP (Uracil phosphoribosyltransferase OS=Anabaena sp. (strain PCC 7120) GN=upp PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.141e-11
Identity = 35/95 (36.84%), Postives = 58/95 (61.05%), Query Frame = 1
Query:  127 KLPNDIS-ERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            KLP     +  VL+ DP+LATG S  +A+  L E+GV  S +  +++++AP  +  +   +  L + T+ ID  +N++  ++PGLG+ GDR FGT
Sbjct:  122 KLPEKFDPQTRVLITDPMLATGGSIMKAMSELTERGVDPSLVRIVSVVAAPPALQKLNAAYSGLIVYTATIDETVNDQGFIVPGLGDAGDRIFGT 216          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_BIFAA (Uracil phosphoribosyltransferase OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083) GN=upp PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.358e-11
Identity = 42/113 (37.17%), Postives = 65/113 (57.52%), Query Frame = 1
Query:   91 RDGDNGKQLIY--EKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRF-PSLK--IVTSEIDVALNEEFRVIPGLGEFGDRYFGTDD 414
            RD +N  Q I    +LP D++ R   L+DP+LATG +   A   L E+G  +  I  + ++ APEG+  V +   PS+K  +V   +D  LN++  ++PGLG+ GDR +G  D
Sbjct:  103 RDEENPTQQITYANRLPEDLTGRQCFLIDPMLATGGTLVAATHYLAERGAKD--ITAVCILGAPEGLKFVEENLDPSIKFKLVLCAVDEKLNDKCYIVPGLGDAGDRLYGVID 213          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_THEM4 (Uracil phosphoribosyltransferase OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=upp PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.997e-11
Identity = 37/96 (38.54%), Postives = 57/96 (59.38%), Query Frame = 1
Query:  121 YEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            Y K P       V +LDP+LATG S+ +A++++ + G    +II + LI++PEG   V    P + I T+ +D  LN +  ++PGLG+ GDR F T
Sbjct:  114 YAKFPKITDNSIVFVLDPMLATGVSSIKALEIVKKNGA--KNIILVTLIASPEGTEKVNIEHPDVIIYTASLDKKLNSKGYILPGLGDAGDRLFRT 207          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_PYRAB (Probable uracil phosphoribosyltransferase OS=Pyrococcus abyssi GN=upp PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.997e-11
Identity = 34/98 (34.69%), Postives = 62/98 (63.27%), Query Frame = 1
Query:  112 QLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFG 405
            ++ Y K+P    E  V++ DP++ATG++  + +  + + G P+  I+ L +++APEGI  +   FP ++I  ++ID  L+ +  ++PGLG+ GDR FG
Sbjct:  121 EMDYVKIPQIKPEDTVIVADPMIATGSTLTRVLGEVKKYGEPKRTIV-LGVLAAPEGISKIKSEFPDVEIFVAKIDRELDHKGYILPGLGDAGDRAFG 217          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_HALMA (Probable uracil phosphoribosyltransferase OS=Haloarcula marismortui GN=upp PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.997e-11
Identity = 36/105 (34.29%), Postives = 59/105 (56.19%), Query Frame = 1
Query:   94 DGDNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            DG+    + Y KLP    +  V++ DP+LATG++    +  +  +     +++ L  +SAPEGI  V +  P   I++  ID  L+E+  ++PGLG+ GDR F T
Sbjct:  120 DGEFPISVEYVKLPEITEDDTVIIADPMLATGSTMATVLDYITSEKTEPENLLVLAAVSAPEGIVRVSEAQPDADIISVAIDDELDEDGFIVPGLGDAGDRAFRT 224          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_CORJK (Uracil phosphoribosyltransferase OS=Corynebacterium jeikeium (strain K411) GN=upp PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.997e-11
Identity = 37/95 (38.95%), Postives = 62/95 (65.26%), Query Frame = 1
Query:  124 EKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSL-KIVTSEIDVALNEEFRVIPGLGEFGDRYFG 405
            E LP+D+S++ V L+DP+LATG S   AI+LL  +G   + I  + ++SA  G+  + +    + ++ T+ ID +LN+E  ++PGLG+ GDR +G
Sbjct:  114 EALPDDLSDQPVFLVDPMLATGGSLLHAIRLLEGRGA--NDITCVCMVSAQPGVDALVEANVGVRRLYTATIDPSLNKEAYIVPGLGDAGDRLYG 206          
The following BLAST results are available for this feature:
BLAST of DY257513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 481
Match NameE-valueIdentityDescription
UPP_CLAM32.405e-1140.21Uracil phosphoribosyltransferase OS=Clavibacter mi... [more]
UPP_MYCHO3.141e-1139.36Uracil phosphoribosyltransferase OS=Mycoplasma hom... [more]
UPP_METM73.141e-1137.37Probable uracil phosphoribosyltransferase OS=Metha... [more]
UPP_BRAJA3.141e-1139.36Uracil phosphoribosyltransferase OS=Bradyrhizobium... [more]
UPP_ANASP3.141e-1136.84Uracil phosphoribosyltransferase OS=Anabaena sp. (... [more]
UPP_BIFAA5.358e-1137.17Uracil phosphoribosyltransferase OS=Bifidobacteriu... [more]
UPP_THEM46.997e-1138.54Uracil phosphoribosyltransferase OS=Thermosipho me... [more]
UPP_PYRAB6.997e-1134.69Probable uracil phosphoribosyltransferase OS=Pyroc... [more]
UPP_HALMA6.997e-1134.29Probable uracil phosphoribosyltransferase OS=Haloa... [more]
UPP_CORJK6.997e-1138.95Uracil phosphoribosyltransferase OS=Corynebacteriu... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK2DG09FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257513 ID=DY257513; Name=DY257513; organism=Citrus sinensis; type=EST; length=633bp
GTTTCTACTGTGATGTTAAGTGGTGAAAGCATGGAAAATGCATTGCGTGC
ATGTTGCAAAGGAATAAAAATTGGAAAAATTCTGATTCACCGTGATGGGG
ACAATGGCAAACAGCTTATCTATGAGAAGCTGCCAAATGATATTTCAGAA
AGACATGTCCTGCTTCTAGATCCTGTTCTTGCCACAGGGAACTCTGCCAA
CCAAGCTATTCAACTACTCATAGAGAAAGGAGTTCCAGAATCCCACATAA
TATTCTTGAATCTCATCTCTGCTCCAGAGGGAATCCATTGTGTTTGCAAA
CGTTTTCCATCACTGAAAATTGTCACTTCAGAGATTGATGTTGCTTTGAA
TGAAGAATTCCGTGTGATACCTGGTCTGGGTGAGTTTGGCGACCGTTACT
TTGGCACTGATGATTGATAGGCTGAAGGTCAAGTAGTGGAGATTGTTAGC
TCTTATCAAATGGGTTGATTTCCCTAGAAATAACATAAATCAATATTTTG
AAAGCTGAGGGAGGCATGTTTCCTGAAAGACGAAAAATAAACAGAAAAGG
GGGGAAAAAAGTCTGAAGGGAGACCCCCACTTTGCAAAATATAATACAAA
TGCTGATTGTTCTCNNNNNNNAANAAAAAAAAA
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