DY257513

Overview
NameDY257513
Unique NameDY257513
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length633
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_THET2 (Uracil phosphoribosyltransferase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=upp PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 6.534e-17
Identity = 43/96 (44.79%), Postives = 64/96 (66.67%), Query Frame = 1
Query:  121 YEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            Y KLP DI+ER   LLDP+LATG SA+ A+ LL E+G   + +  + +++APEG+  + K  P  ++V + ID  LN+   ++PGLG+ GDR +GT
Sbjct:  114 YIKLPPDIAERRAFLLDPMLATGGSASLALSLLKERGA--TGVKLMAILAAPEGLERIAKDHPDTEVVVAAIDERLNDHGYIVPGLGDAGDRIYGT 207          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_LACPL (Uracil phosphoribosyltransferase OS=Lactobacillus plantarum GN=upp PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 6.534e-17
Identity = 46/109 (42.20%), Postives = 73/109 (66.97%), Query Frame = 1
Query:   85 IHRDGDNGKQLIY-EKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            ++RD    K + Y  KLP+DIS+R + ++DP+LATG SA  A+ +L ++G   S+I F+ L++APEG+  +    P + + T+ +D  LNE+  ++PGLG+ GDR FGT
Sbjct:  102 MYRDEKTLKPVEYFVKLPSDISQRQLFVVDPMLATGGSAIMAMDMLKKRGA--SNIKFMCLVAAPEGVKALRDAHPDIDVYTAALDDHLNEDGYIVPGLGDAGDRLFGT 208          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_GEOSW (Uracil phosphoribosyltransferase OS=Geobacillus sp. (strain WCH70) GN=upp PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 6.534e-17
Identity = 47/109 (43.12%), Postives = 69/109 (63.30%), Query Frame = 1
Query:   85 IHRDGDNGKQL-IYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            ++RD +  K +  Y KLP D+ ER  +++DP+LATG SA +AI  L ++G     I F+ LI+APEG+  V K  P + I  + +D  LN+   ++PGLG+ GDR FGT
Sbjct:  102 LYRDPETLKPVEYYVKLPTDVEERDFIVVDPMLATGGSAVEAINALKKRGAKS--IKFMCLIAAPEGVEAVKKAHPDVDIYIAALDEKLNDHGYIVPGLGDAGDRLFGT 208          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_FINM2 (Uracil phosphoribosyltransferase OS=Finegoldia magna (strain ATCC 29328) GN=upp PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 8.534e-17
Identity = 44/96 (45.83%), Postives = 63/96 (65.62%), Query Frame = 1
Query:  121 YEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            Y KLP D+ ER ++++DP+LATG SA  AI  L E G    +I  +N+I+APEGI  V ++ P + I  + +D  LN+   ++PGLG+ GDR FGT
Sbjct:  115 YCKLPKDVEERDIIVVDPMLATGGSAEAAITFLKEHGC--KNIKLVNIIAAPEGIKMVQEKHPDVDIYVAGLDEKLNDHGYIVPGLGDAGDRLFGT 208          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_CLOPS (Uracil phosphoribosyltransferase OS=Clostridium perfringens (strain SM101 / Type A) GN=upp PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 8.534e-17
Identity = 49/109 (44.95%), Postives = 71/109 (65.14%), Query Frame = 1
Query:   85 IHRDGDNGKQLIYE-KLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            ++RD +  + + Y  KLP DI+ER ++++DP+LATG SA  AI LL ++G  +  I  + LIS+PEGI  V K  P + I  + ID  LN+   ++PGLG+ GDR FGT
Sbjct:  102 LYRDEETLQPVEYFCKLPQDIAERDIIVVDPMLATGGSATDAITLLKKRGAKQ--IRLMCLISSPEGIEFVQKAHPDVDIYVACIDEKLNDHGYIVPGLGDAGDRLFGT 208          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_CLOD6 (Uracil phosphoribosyltransferase OS=Clostridium difficile (strain 630) GN=upp PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 8.534e-17
Identity = 51/109 (46.79%), Postives = 67/109 (61.47%), Query Frame = 1
Query:   85 IHRDGDNGKQLIYE-KLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            ++RD +  K + Y  KLP DI ER ++++DP+LATG SA  AI LL  KG     I   NL++APEGI  V K    + I  + +D  LNE   +IPGLG+ GDR FGT
Sbjct:  102 LYRDPETLKPVEYYCKLPQDIGERDIIVVDPMLATGGSAVAAIDLLKSKGAKS--IKLANLVAAPEGIAEVQKYHDDVDIYVASVDERLNEHGYIIPGLGDAGDRLFGT 208          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_ALKOO (Uracil phosphoribosyltransferase OS=Alkaliphilus oremlandii (strain OhILAs) GN=upp PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 8.534e-17
Identity = 43/96 (44.79%), Postives = 64/96 (66.67%), Query Frame = 1
Query:  121 YEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            Y KLP D+ ER +++LDP+LATG SAN AIQ + ++G   ++I  + L+S P+GI  V +  P + I  + ID  L++   ++PGLG+ GDR FGT
Sbjct:  115 YVKLPTDVHERELIVLDPMLATGGSANAAIQFIKDRGA--TNIKLVCLVSCPQGIAAVQEAHPDVDIYVAAIDETLDDHAYIVPGLGDAGDRLFGT 208          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_STRR6 (Uracil phosphoribosyltransferase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=upp PE=3 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.115e-16
Identity = 46/109 (42.20%), Postives = 72/109 (66.06%), Query Frame = 1
Query:   85 IHRDGDNGKQLIY-EKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            ++RD +  + + Y  KLP DI +R + ++DP+LATG SA  A+  L ++G   S+I F+ L+SAPEG+  + +  P ++I T+ +D  LNE   ++PGLG+ GDR FGT
Sbjct:  102 MYRDEETLQPVEYLVKLPEDIDQRQIFVVDPMLATGGSAILAVDSLKKRGA--SNIKFVCLVSAPEGVKALQEAHPDVEIFTAALDERLNEHGYIVPGLGDAGDRLFGT 208          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_STRPN (Uracil phosphoribosyltransferase OS=Streptococcus pneumoniae GN=upp PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.115e-16
Identity = 46/109 (42.20%), Postives = 72/109 (66.06%), Query Frame = 1
Query:   85 IHRDGDNGKQLIY-EKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            ++RD +  + + Y  KLP DI +R + ++DP+LATG SA  A+  L ++G   S+I F+ L+SAPEG+  + +  P ++I T+ +D  LNE   ++PGLG+ GDR FGT
Sbjct:  102 MYRDEETLQPVEYLVKLPEDIDQRQIFVVDPMLATGGSAILAVDSLKKRGA--SNIKFVCLVSAPEGVKALQEAHPDVEIFTAALDERLNEHGYIVPGLGDAGDRLFGT 208          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_PSEA6 (Uracil phosphoribosyltransferase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=upp PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.115e-16
Identity = 46/109 (42.20%), Postives = 69/109 (63.30%), Query Frame = 1
Query:   85 IHRDGDNGKQLIY-EKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            ++RD +  + + Y +K+  D+ ER  L++DP+LATG +    I LL EKG    HI+ L L++APEGI  V  + P + I T+ +D  LNE   ++PGLG+ GD+ FGT
Sbjct:  102 LYRDEETLQPVAYFDKVVKDVEERTALIVDPMLATGGTLIATIDLLKEKGC--QHIMGLFLVAAPEGIEAVVSKHPDVDIYTAAVDDKLNEHGYILPGLGDAGDKIFGT 208          
The following BLAST results are available for this feature:
BLAST of DY257513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 481
Match NameE-valueIdentityDescription
UPP_THET26.534e-1744.79Uracil phosphoribosyltransferase OS=Thermus thermo... [more]
UPP_LACPL6.534e-1742.20Uracil phosphoribosyltransferase OS=Lactobacillus ... [more]
UPP_GEOSW6.534e-1743.12Uracil phosphoribosyltransferase OS=Geobacillus sp... [more]
UPP_FINM28.534e-1745.83Uracil phosphoribosyltransferase OS=Finegoldia mag... [more]
UPP_CLOPS8.534e-1744.95Uracil phosphoribosyltransferase OS=Clostridium pe... [more]
UPP_CLOD68.534e-1746.79Uracil phosphoribosyltransferase OS=Clostridium di... [more]
UPP_ALKOO8.534e-1744.79Uracil phosphoribosyltransferase OS=Alkaliphilus o... [more]
UPP_STRR61.115e-1642.20Uracil phosphoribosyltransferase OS=Streptococcus ... [more]
UPP_STRPN1.115e-1642.20Uracil phosphoribosyltransferase OS=Streptococcus ... [more]
UPP_PSEA61.115e-1642.20Uracil phosphoribosyltransferase OS=Pseudoalteromo... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK2DG09FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257513 ID=DY257513; Name=DY257513; organism=Citrus sinensis; type=EST; length=633bp
GTTTCTACTGTGATGTTAAGTGGTGAAAGCATGGAAAATGCATTGCGTGC
ATGTTGCAAAGGAATAAAAATTGGAAAAATTCTGATTCACCGTGATGGGG
ACAATGGCAAACAGCTTATCTATGAGAAGCTGCCAAATGATATTTCAGAA
AGACATGTCCTGCTTCTAGATCCTGTTCTTGCCACAGGGAACTCTGCCAA
CCAAGCTATTCAACTACTCATAGAGAAAGGAGTTCCAGAATCCCACATAA
TATTCTTGAATCTCATCTCTGCTCCAGAGGGAATCCATTGTGTTTGCAAA
CGTTTTCCATCACTGAAAATTGTCACTTCAGAGATTGATGTTGCTTTGAA
TGAAGAATTCCGTGTGATACCTGGTCTGGGTGAGTTTGGCGACCGTTACT
TTGGCACTGATGATTGATAGGCTGAAGGTCAAGTAGTGGAGATTGTTAGC
TCTTATCAAATGGGTTGATTTCCCTAGAAATAACATAAATCAATATTTTG
AAAGCTGAGGGAGGCATGTTTCCTGAAAGACGAAAAATAAACAGAAAAGG
GGGGAAAAAAGTCTGAAGGGAGACCCCCACTTTGCAAAATATAATACAAA
TGCTGATTGTTCTCNNNNNNNAANAAAAAAAAA
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