DY257513

Overview
NameDY257513
Unique NameDY257513
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length633
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_RHIME (Uracil phosphoribosyltransferase OS=Rhizobium meliloti GN=upp PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.243e-16
Identity = 49/109 (44.95%), Postives = 73/109 (66.97%), Query Frame = 1
Query:   85 IHRDGDNGKQLIYE-KLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            ++RD +  + + Y  K P++I+ER V+++DP+LATGNSA  AI+ L E+G    +I FL L++APEGI       P + I T+ ID  LNE+  ++PGLG+ GDR +GT
Sbjct:  102 VYRDHETLQAVEYFFKAPDNINERLVIVVDPMLATGNSAIAAIEKLKERGA--RNIRFLCLLAAPEGIRNFQGAHPDVPIFTASIDSHLNEKGYIVPGLGDAGDRMYGT 208          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_CLONN (Uracil phosphoribosyltransferase OS=Clostridium novyi (strain NT) GN=upp PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.243e-16
Identity = 49/109 (44.95%), Postives = 66/109 (60.55%), Query Frame = 1
Query:   85 IHRDGDNGKQLIYE-KLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            ++RD +  K + Y  K+P DI ER +++ DP+LATG SA  AI  L ++G     I  + LIS+PEGI  V    P + I   +ID  LNE   +IPGLG+ GDR FGT
Sbjct:  102 MYRDEETFKPVEYFCKMPQDIHERDIIVTDPMLATGGSAIDAINALKKRGAKS--IRLMCLISSPEGIKAVMDAHPDVDIYVGDIDERLNEHGYIIPGLGDAGDRLFGT 208          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_BACP2 (Uracil phosphoribosyltransferase OS=Bacillus pumilus (strain SAFR-032) GN=upp PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.243e-16
Identity = 43/96 (44.79%), Postives = 65/96 (67.71%), Query Frame = 1
Query:  121 YEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            Y KLP+D+ ER  +++DP+LATG SA +A+  L ++G    +I F+ LI+APEG+  + K  P + I  + +D  LNE+  +IPGLG+ GDR +GT
Sbjct:  115 YVKLPSDVEEREFIVVDPMLATGGSAVEALNSLKKRGA--KNIRFMCLIAAPEGVEEMQKHHPDVDIYIAALDEKLNEKGYIIPGLGDAGDRMYGT 208          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_RHILW (Uracil phosphoribosyltransferase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=upp PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.235e-16
Identity = 44/96 (45.83%), Postives = 64/96 (66.67%), Query Frame = 1
Query:  121 YEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            Y K P D++ER ++++DP+LATGNS+  AI  L E+G    +I FL L++APEGI       P + + T+ ID  LNE+  ++PGLG+ GDR +GT
Sbjct:  115 YFKAPEDVAERLIIVVDPMLATGNSSIAAIDKLKERGA--HNIRFLCLLAAPEGIQNFRAAHPDVPVFTASIDSHLNEKGYIVPGLGDAGDRMYGT 208          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_SYMTH (Uracil phosphoribosyltransferase OS=Symbiobacterium thermophilum GN=upp PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.532e-16
Identity = 47/109 (43.12%), Postives = 67/109 (61.47%), Query Frame = 1
Query:   85 IHRDGDNGKQLIYE-KLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            ++RD D  K + Y  KLP D+ ER +L+LDP+LATG S   ++ L+  +G     I  L LI+APEG+  V +  P + I  + +D  LNE   ++PGLG+ GDR FGT
Sbjct:  102 LYRDPDTLKPVEYYCKLPTDLGERELLVLDPMLATGGSVVASLDLIKRQG--GRRIKLLCLIAAPEGVQAVQEAHPDVDIYLAALDEMLNEHAYIVPGLGDAGDRLFGT 208          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_STRMU (Uracil phosphoribosyltransferase OS=Streptococcus mutans GN=upp PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.532e-16
Identity = 46/109 (42.20%), Postives = 72/109 (66.06%), Query Frame = 1
Query:   85 IHRDGDNGKQLIY-EKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            ++RD +  + + Y  KLP DI +R + ++DP+LATG SA  AI  L ++G   ++I F+ L+SAPEG+  + +  P + I T+ +D  LNE+  ++PGLG+ GDR FGT
Sbjct:  102 MYRDEETLEPVEYLVKLPEDIDQRQIFVVDPMLATGGSAVLAIDSLKKRGA--ANIKFVCLVSAPEGLKKLQEAHPDIDIYTAALDEKLNEKGYIVPGLGDAGDRLFGT 208          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_STAAW (Uracil phosphoribosyltransferase OS=Staphylococcus aureus (strain MW2) GN=upp PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.532e-16
Identity = 46/109 (42.20%), Postives = 72/109 (66.06%), Query Frame = 1
Query:   85 IHRDGDNGKQLIY-EKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            ++RD +  K + Y  KLP DI+ER ++++DP+LATG SA +AI  L ++G    +I F+ LI+APEG+  + +  P + I  + +D  LN++  + PGLG+ GDR FGT
Sbjct:  102 LYRDPETLKAVEYFAKLPQDITERQIIVVDPMLATGASAIEAITSLKKRGA--KNIRFMCLIAAPEGVEKMHEAHPDVDIYIAALDEKLNDKAYITPGLGDAGDRLFGT 208          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_STAAT (Uracil phosphoribosyltransferase OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=upp PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.532e-16
Identity = 46/109 (42.20%), Postives = 72/109 (66.06%), Query Frame = 1
Query:   85 IHRDGDNGKQLIY-EKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            ++RD +  K + Y  KLP DI+ER ++++DP+LATG SA +AI  L ++G    +I F+ LI+APEG+  + +  P + I  + +D  LN++  + PGLG+ GDR FGT
Sbjct:  102 LYRDPETLKAVEYFAKLPQDITERQIIVVDPMLATGASAIEAITSLKKRGA--KNIRFMCLIAAPEGVEKMHEAHPDVDIYIAALDEKLNDKAYITPGLGDAGDRLFGT 208          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_STAAS (Uracil phosphoribosyltransferase OS=Staphylococcus aureus (strain MSSA476) GN=upp PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.532e-16
Identity = 46/109 (42.20%), Postives = 72/109 (66.06%), Query Frame = 1
Query:   85 IHRDGDNGKQLIY-EKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            ++RD +  K + Y  KLP DI+ER ++++DP+LATG SA +AI  L ++G    +I F+ LI+APEG+  + +  P + I  + +D  LN++  + PGLG+ GDR FGT
Sbjct:  102 LYRDPETLKAVEYFAKLPQDITERQIIVVDPMLATGASAIEAITSLKKRGA--KNIRFMCLIAAPEGVEKMHEAHPDVDIYIAALDEKLNDKAYITPGLGDAGDRLFGT 208          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_STAAR (Uracil phosphoribosyltransferase OS=Staphylococcus aureus (strain MRSA252) GN=upp PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.532e-16
Identity = 46/109 (42.20%), Postives = 72/109 (66.06%), Query Frame = 1
Query:   85 IHRDGDNGKQLIY-EKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            ++RD +  K + Y  KLP DI+ER ++++DP+LATG SA +AI  L ++G    +I F+ LI+APEG+  + +  P + I  + +D  LN++  + PGLG+ GDR FGT
Sbjct:  102 LYRDPETLKAVEYFAKLPQDITERQIIVVDPMLATGASAIEAITSLKKRGA--KNIRFMCLIAAPEGVEKMHEAHPDVDIYIAALDEKLNDKAYITPGLGDAGDRLFGT 208          
The following BLAST results are available for this feature:
BLAST of DY257513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 481
Match NameE-valueIdentityDescription
UPP_RHIME3.243e-1644.95Uracil phosphoribosyltransferase OS=Rhizobium meli... [more]
UPP_CLONN3.243e-1644.95Uracil phosphoribosyltransferase OS=Clostridium no... [more]
UPP_BACP23.243e-1644.79Uracil phosphoribosyltransferase OS=Bacillus pumil... [more]
UPP_RHILW4.235e-1645.83Uracil phosphoribosyltransferase OS=Rhizobium legu... [more]
UPP_SYMTH5.532e-1643.12Uracil phosphoribosyltransferase OS=Symbiobacteriu... [more]
UPP_STRMU5.532e-1642.20Uracil phosphoribosyltransferase OS=Streptococcus ... [more]
UPP_STAAW5.532e-1642.20Uracil phosphoribosyltransferase OS=Staphylococcus... [more]
UPP_STAAT5.532e-1642.20Uracil phosphoribosyltransferase OS=Staphylococcus... [more]
UPP_STAAS5.532e-1642.20Uracil phosphoribosyltransferase OS=Staphylococcus... [more]
UPP_STAAR5.532e-1642.20Uracil phosphoribosyltransferase OS=Staphylococcus... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK2DG09FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257513 ID=DY257513; Name=DY257513; organism=Citrus sinensis; type=EST; length=633bp
GTTTCTACTGTGATGTTAAGTGGTGAAAGCATGGAAAATGCATTGCGTGC
ATGTTGCAAAGGAATAAAAATTGGAAAAATTCTGATTCACCGTGATGGGG
ACAATGGCAAACAGCTTATCTATGAGAAGCTGCCAAATGATATTTCAGAA
AGACATGTCCTGCTTCTAGATCCTGTTCTTGCCACAGGGAACTCTGCCAA
CCAAGCTATTCAACTACTCATAGAGAAAGGAGTTCCAGAATCCCACATAA
TATTCTTGAATCTCATCTCTGCTCCAGAGGGAATCCATTGTGTTTGCAAA
CGTTTTCCATCACTGAAAATTGTCACTTCAGAGATTGATGTTGCTTTGAA
TGAAGAATTCCGTGTGATACCTGGTCTGGGTGAGTTTGGCGACCGTTACT
TTGGCACTGATGATTGATAGGCTGAAGGTCAAGTAGTGGAGATTGTTAGC
TCTTATCAAATGGGTTGATTTCCCTAGAAATAACATAAATCAATATTTTG
AAAGCTGAGGGAGGCATGTTTCCTGAAAGACGAAAAATAAACAGAAAAGG
GGGGAAAAAAGTCTGAAGGGAGACCCCCACTTTGCAAAATATAATACAAA
TGCTGATTGTTCTCNNNNNNNAANAAAAAAAAA
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