DY257387

Overview
NameDY257387
Unique NameDY257387
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1134
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY257387 vs. ExPASy Swiss-Prot
Match: GSTX6_SOYBN (Probable glutathione S-transferase OS=Glycine max GN=HSP26-A PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 1.265e-32
Identity = 75/157 (47.77%), Postives = 101/157 (64.33%), Query Frame = 1
Query:  217 DEVILLDFWPSMFGMRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPVCESSIIVQYIDEVWKDKAPLLPSDRYQRAQARFWVDFIDKKMYDASTKT-WXXXXXXXXXXXXXXXXXXXXLEGQLGDKPFFGGDNFGYLDLSLI 684
            ++V LL    S F  RV+IAL  KGV+Y++ EE+L NKS LLL+ NPVHKK+PV +HN +P+ ES +IV+YIDE WK+  P+LPSD YQRA ARFW  FID K+  A +K+ +                    LE +L DK FFGG+ FG +D++ +
Sbjct:    6 EDVKLLGIVGSPFVCRVQIALKLKGVEYKFLEENLGNKSDLLLKYNPVHKKVPVFVHNEQPIAESLVIVEYIDETWKNN-PILPSDPYQRALARFWSKFIDDKIVGAVSKSVFTVDEKEREKNVEETYEALQFLENELKDKKFFGGEEFGLVDIAAV 161          
BLAST of DY257387 vs. ExPASy Swiss-Prot
Match: GSTX3_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 2.157e-32
Identity = 85/199 (42.71%), Postives = 112/199 (56.28%), Query Frame = 1
Query:  220 EVILLDFWPSMFGMRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPVCESSIIVQYIDEVWKDKAPLLPSDRYQRAQARFWVDFIDKKMYDASTKTWXXXXXXXXXXXXXXXXXXXXLEGQLGDKPFFGGDNFGYLDL--SLIPFYYTY--ETFGKSSIEAE-CPQFKAWVKRCLARETIAKALP 801
            EV LL FW S F  RV  AL  KGVKYEY EED  NKS LLLQ NPVHKK+PVLIHNG+P+ ES +I++YIDE ++  + +LP D Y RA ARFW  F+  K+  A   T+                    L+ +L DK FF GD FG+ D+  +L+ F+     E +G   + +E  P F  W    +    + ++LP
Sbjct:    3 EVKLLGFWYSPFTHRVEWALKLKGVKYEYIEEDRDNKSSLLLQSNPVHKKVPVLIHNGKPIVESMVILEYIDETFEGPS-ILPKDPYDRALARFWSKFLGDKV-AAVVNTFFRKGEEQEKGKEEVYEMLKVLDNELKDKKFFVGDKFGFADIAANLVGFWLGVFEEGYGVVLVTSEKFPNFSRWRDEYINCSQVKESLP 199          
BLAST of DY257387 vs. ExPASy Swiss-Prot
Match: GSTU6_ORYSJ (Probable glutathione S-transferase GSTU6 OS=Oryza sativa subsp. japonica GN=GSTU6 PE=2 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 5.875e-30
Identity = 84/213 (39.44%), Postives = 113/213 (53.05%), Query Frame = 1
Query:  220 EVILLDFWPSMFGMRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPVCESSIIVQYIDEVWKDKA----PLLPSDRYQRAQARFWVDFIDKKMYDA------STKTWXXXXXXXXXXXXXXXXXXXXLEGQLGD----KPFFGGDNFGYLDLSLIPFYYTY----ETFGKSSIE-AECPQFKAWVKRCLARETIAKALP 801
            E+ LL  W S + +RVR+ L  K + YEY EE+L +KS LLL  NPVHK +PVL+H GRPV ES +IVQYIDEVW   A     ++PSD Y+RA ARFW  ++D K+  A       +KT                     LEG  G+    KPFFGGD  G++D+ L  +   +    +  G+  I+ A  P   AW +R  A +     +P
Sbjct:    6 ELKLLGVWSSPYAIRVRVVLNLKSLPYEYVEENLGDKSDLLLASNPVHKSVPVLLHAGRPVNESQVIVQYIDEVWPGGAGGRPSVMPSDPYERAVARFWAAYVDDKVRPAWLAILFGSKT----EEERAAAVAQAVAALETLEGAFGECSKGKPFFGGDGVGFVDVVLGGYLGWFTAIDKLIGRRLIDPARTPALAAWEERFRATDAAKGVVP 214          
BLAST of DY257387 vs. ExPASy Swiss-Prot
Match: GSTX1_SOLTU (Probable glutathione S-transferase OS=Solanum tuberosum GN=PRP1 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 1.108e-28
Identity = 71/152 (46.71%), Postives = 92/152 (60.53%), Query Frame = 1
Query:  220 EVILLDFWPSMFGMRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPVCESSIIVQYIDEVWKDKAPLLPSDRYQRAQARFWVDFIDKKMYDASTKTWXXXXXXXXXXXXXXXXXXXXLEGQLGDKPFFGGDNFGYLDL 675
            EV LL    S F  RV  AL  KGVKYE+ EEDL+NKSPLLLQ NP+HKKIPVLIHNG+ +CES +I++YIDE ++  + +LP D Y RA ARFW  +++ K   A  K++                    L+ +  DK  F GD FG+ D+
Sbjct:    3 EVKLLGLRYSPFSHRVEWALKIKGVKYEFIEEDLQNKSPLLLQSNPIHKKIPVLIHNGKCICESMVILEYIDEAFEGPS-ILPKDPYDRALARFWAKYVEDK-GAAVWKSFFSKGEEQEKAKEEAYEMLKILDNEFKDKKCFVGDKFGFADI 152          
BLAST of DY257387 vs. ExPASy Swiss-Prot
Match: GSTX2_MAIZE (Probable glutathione S-transferase BZ2 OS=Zea mays GN=BZ2 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 3.697e-16
Identity = 74/205 (36.10%), Postives = 96/205 (46.83%), Query Frame = 1
Query:  247 SMFGMRVRIALAEKGVKYEYKEEDL-KNKSPLLLQMNPVHKKIPVLI-HNGRPVCESSIIVQYIDEVWKDKAP------LLPSDRYQRAQARFWVDFIDKKMYDA-STKTWXXXXXXXXXXXXXXXXXXXXLEGQLGDKP-----FFGGDNF-GYLDLSL---IPFYYTYETF-GKSSIEAEC-PQFKAWVKRCLARETIAKALP 801
            S F  R R+AL  +GV YE  +E L   KS  LL  NPV+ KIPVL+  +GR +CES++IVQYI++V ++         LLP D Y+RA  RFW  FID K + A    +                     LE    D+      F GGD   G LDL+L   +P     E   G S I+A   P    W +R  A     + LP
Sbjct:    9 SPFTARARLALDLRGVAYELLDEPLGPKKSDRLLAANPVYGKIPVLLLPDGRAICESAVIVQYIEDVARESGGAEAGSLLLPDDPYERAMHRFWTAFIDDKFWPALDAVSLAPTPGARAQAAEDTRAALSLLEEAFKDRSNGRAFFSGGDAAPGLLDLALGCFLPALRACERLHGLSLIDASATPLLDGWSQRFAAHPAAKRVLP 213          
The following BLAST results are available for this feature:
BLAST of DY257387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
GSTX6_SOYBN1.265e-3247.77Probable glutathione S-transferase OS=Glycine max ... [more]
GSTX3_TOBAC2.157e-3242.71Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTU6_ORYSJ5.875e-3039.44Probable glutathione S-transferase GSTU6 OS=Oryza ... [more]
GSTX1_SOLTU1.108e-2846.71Probable glutathione S-transferase OS=Solanum tube... [more]
GSTX2_MAIZE3.697e-1636.10Probable glutathione S-transferase BZ2 OS=Zea mays... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK2BC11FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257387 ID=DY257387; Name=DY257387; organism=Citrus sinensis; type=EST; length=1134bp
GAACACGAAGTGGCCAGGAGAAGATCATATATTTCTGGAAAGAAAAGACA
CCAATATTAGCCACGTACGGTCATCTCAAACATTTGCTAAGTCCAAACCG
ATTAGCGCAAACTTTTCGCTATAAATATGCACTCTCGTAACTTCACTTTC
GGCGTGTTTATCGTGTCTTTTCATTTATTCACTGTTGATTCTTAGTAAGC
TTCTGTAATAATGGCGGACGAAGTGATTCTGTTGGATTTCTGGCCCAGCA
TGTTCGGGATGAGGGTCAGGATTGCTCTGGCGGAGAAAGGCGTCAAGTAT
GAATACAAGGAAGAGGACTTGAAGAACAAGAGCCCCCTGCTTCTGCAGAT
GAACCCGGTTCACAAGAAGATCCCGGTTCTCATCCACAACGGCAGACCGG
TCTGTGAGTCATCCATCATTGTTCAGTACATTGATGAAGTGTGGAAGGAC
AAGGCTCCATTGCTTCCCTCTGATCGCTACCAGAGAGCTCAAGCTAGGTT
CTGGGTAGATTTCATTGACAAGAAGATGTATGATGCTTCGACGAAGACAT
GGACCACAGAGGGAGAAGAGCAGGAGGCTGCTAAGAAGGAGTTCTTTGAA
GCTCTGAAGACCTTGGAAGGGCAGCTTGGAGACAAGCCTTTCTTCGGAGG
AGACAATTTTGGGTATTTGGATTTGAGTTTGATCCCATTCTATTACACAT
ATGAGACATTTGGAAAGTCCAGCATTGAGGCTGAGTGCCCCCAGTTCAAA
GCTTGGGTGAAGAGATGCTTGGCAAGGGAGACTATTGCCAAGGCCCTTCC
TTAATGAAAAAAAAGGGCTTGAACTTGCTTCGGGGATGAGGAAAAATTTA
GTATTGGAAGAAAAAGAAAAAGGGAACTATCTAGGAACTGAAAAAAGGCC
AGGAACCGCACCCGGGGCTGCCGGTTATATCTTAAGGGGGGTGAATGGGG
GTTTGGGTTTAGAAAATTGGTTTCCCTATTGGGGGGTTGGATTCCCAGAA
TGTTGGGGTTTCCCTTGGGAAAAAAAAACCCCCAAAAAAAGGAAAATTAA
ATTTTTTGCCCCCCACGGGTTTTTCCTTAAAGAAATTTGGGAAACCCCCA
AAAAACCACACGCGGTGTAAATTATTATTTAAAT
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