EG358262

Overview
NameEG358262
Unique NameEG358262
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length244
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHSA_IPONI (Chalcone synthase A (Fragment) OS=Ipomoea nil GN=CHSA PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.657e-18
Identity = 43/71 (60.56%), Postives = 56/71 (78.87%), Query Frame = 2
Query:   32 TMLTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            T+LT    R+ +  EG A I+AIGTA P N VDQ+TYPD+YFRITNSEHL + KEKF+R+C+KS I+KR++
Sbjct:    3 TILTNTWTRREKRIEGHAKILAIGTAIPANWVDQTTYPDFYFRITNSEHLLEHKEKFRRICNKSKIRKRHL 73          
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHSC_IPOPU (Chalcone synthase C (Fragment) OS=Ipomoea purpurea GN=CHSC PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.826e-18
Identity = 42/71 (59.15%), Postives = 56/71 (78.87%), Query Frame = 2
Query:   32 TMLTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            T+LT    R+ +  +G A I+AIGTA P N VDQ+TYPD+YFRITNSEHL + KEKF+R+C+KS I+KR++
Sbjct:    6 TILTDTWTRREKRFDGHAKILAIGTAIPANWVDQTTYPDFYFRITNSEHLLEYKEKFRRICNKSKIRKRHL 76          
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHSB_IPOTF (Chalcone synthase B (Fragment) OS=Ipomoea trifida GN=CHSB PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.826e-18
Identity = 46/73 (63.01%), Postives = 58/73 (79.45%), Query Frame = 2
Query:   32 TMLTVDEVRKAQG--AEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            TMLT    R+A+    EG A I+AIGTATP N VDQ+TYPD+YFRITNS+HL + KEKF+R+C+KS I+KR+M
Sbjct:    6 TMLTDTWSRRAKRFEIEGYAKILAIGTATPANWVDQTTYPDFYFRITNSQHLLEHKEKFRRICNKSNIRKRHM 78          
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHSB_IPONI (Chalcone synthase B (Fragment) OS=Ipomoea nil GN=CHSB PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.074e-17
Identity = 40/62 (64.52%), Postives = 52/62 (83.87%), Query Frame = 2
Query:   59 KAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            +A+  EG A I AIGTATP N VDQ+TYPD+YFRITNS+HL + KEKF+R+C+KS I+KR++
Sbjct:   15 RAKKLEGDAKIWAIGTATPANWVDQTTYPDFYFRITNSQHLLEHKEKFRRICNKSKIRKRHL 76          
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHSA_IPOTF (Chalcone synthase A (Fragment) OS=Ipomoea trifida GN=CHSA PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.074e-17
Identity = 40/61 (65.57%), Postives = 52/61 (85.25%), Query Frame = 2
Query:   62 AQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            A+  EG A ++AIGTATP N VDQ+TYPD+YFRITNSEHL + KEKF+R+C+KS I+KR++
Sbjct:   14 AKRFEGHAKLLAIGTATPTNWVDQATYPDFYFRITNSEHLLEHKEKFRRICNKSKIRKRHL 74          
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHSA_IPOCO (Chalcone synthase A (Fragment) OS=Ipomoea cordatotriloba GN=CHSA PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.074e-17
Identity = 40/61 (65.57%), Postives = 52/61 (85.25%), Query Frame = 2
Query:   62 AQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            A+  EG A ++AIGTATP N VDQ+TYPD+YFRITNSEHL + KEKF+R+C+KS I+KR++
Sbjct:   14 AKRFEGHAKLLAIGTATPTNWVDQATYPDFYFRITNSEHLLEHKEKFRRICNKSKIRKRHL 74          
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHSB_IPOTR (Chalcone synthase B (Fragment) OS=Ipomoea triloba GN=CHSB PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.832e-17
Identity = 44/73 (60.27%), Postives = 58/73 (79.45%), Query Frame = 2
Query:   32 TMLTVDEVRKAQG--AEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            T+LT    R+A+    EG A I+AIGTATP N VDQ+TYPD+YFRITNS+HL + KEKF+R+C+KS I+KR++
Sbjct:    6 TVLTDTWGRRAKRFEIEGYAKILAIGTATPANWVDQTTYPDFYFRITNSQHLLEHKEKFRRICNKSKIRKRHL 78          
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHSA_IPOTR (Chalcone synthase A (Fragment) OS=Ipomoea triloba GN=CHSA PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 7.697e-16
Identity = 38/61 (62.30%), Postives = 50/61 (81.97%), Query Frame = 2
Query:   62 AQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            A+  EG A ++AIGTATP N VDQ+TYPD+YFRITNSE L + KEKF+R+C+KS I+ R++
Sbjct:   14 AKRFEGHAKLLAIGTATPTNWVDQATYPDFYFRITNSERLLEHKEKFRRICNKSKIRFRHL 74          
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: VPS_PSINU (Phloroisovalerophenone synthase OS=Psilotum nudum GN=VPS PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 8.510e-15
Identity = 35/63 (55.56%), Postives = 45/63 (71.43%), Query Frame = 2
Query:   56 RKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            RK + A GP +++AIG+A PPN   QS +PD+YF IT S H+ ++K KF RMC KS IKKR M
Sbjct:   15 RKKERASGPVSVLAIGSANPPNVFHQSLFPDFYFNITQSNHMAEVKAKFTRMCAKSGIKKRRM 77          
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: TBSYN_HYPAN (Trihydroxybenzophenone synthase OS=Hypericum androsaemum PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.575e-13
Identity = 32/53 (60.38%), Postives = 43/53 (81.13%), Query Frame = 2
Query:   83 ATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRY 241
            A+++AIGT  P + + Q  YPD+YFR TNSEH+T+LKEKFKR+C KS I+KR+
Sbjct:   20 ASVLAIGTTNPEHFILQEDYPDFYFRNTNSEHMTELKEKFKRICVKSHIRKRH 72          
The following BLAST results are available for this feature:
BLAST of EG358262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
CHSA_IPONI1.657e-1860.56Chalcone synthase A (Fragment) OS=Ipomoea nil GN=C... [more]
CHSC_IPOPU2.826e-1859.15Chalcone synthase C (Fragment) OS=Ipomoea purpurea... [more]
CHSB_IPOTF2.826e-1863.01Chalcone synthase B (Fragment) OS=Ipomoea trifida ... [more]
CHSB_IPONI1.074e-1764.52Chalcone synthase B (Fragment) OS=Ipomoea nil GN=C... [more]
CHSA_IPOTF1.074e-1765.57Chalcone synthase A (Fragment) OS=Ipomoea trifida ... [more]
CHSA_IPOCO1.074e-1765.57Chalcone synthase A (Fragment) OS=Ipomoea cordatot... [more]
CHSB_IPOTR1.832e-1760.27Chalcone synthase B (Fragment) OS=Ipomoea triloba ... [more]
CHSA_IPOTR7.697e-1662.30Chalcone synthase A (Fragment) OS=Ipomoea triloba ... [more]
VPS_PSINU8.510e-1555.56Phloroisovalerophenone synthase OS=Psilotum nudum ... [more]
TBSYN_HYPAN3.575e-1360.38Trihydroxybenzophenone synthase OS=Hypericum andro... [more]

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Properties
Property NameValue
Genbank description12d2 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0012d2, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358262 ID=EG358262; Name=EG358262; organism=Citrus sinensis; type=EST; length=244bp
ACCCGGGGAACCGTTGGATTGGAAGCAACAAACAATGTTGACCGTCGATG
AAGTTCGGAAGGCTCAAGGTGCCGAAGGTCCGGCCACGATCATGGCCATT
GGAACGGCAACCCCTCCGAATTGTGTTGATCAAAGCACGTATCCGGATTA
TTATTTTCGCATCACAAATAGTGAACACTTGACTGATCTTAAAGAGAAAT
TCAAGCGCATGTGTGACAAATCCATGATCAAGAAGCGATACATG
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