EG358262

Overview
NameEG358262
Unique NameEG358262
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length244
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHSB_SOLTU (Chalcone synthase 1B OS=Solanum tuberosum GN=CHS1B PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 2.465e-30
Identity = 61/70 (87.14%), Postives = 66/70 (94.29%), Query Frame = 2 
Query:   35 MLTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            M+TV+E RKAQ AEGPATI+AIGT+TP NCVDQSTYPDYYFRITNSEH T+LKEKFKRMCDKSMIKKRYM
Sbjct:    1 MVTVEEYRKAQRAEGPATILAIGTSTPSNCVDQSTYPDYYFRITNSEHKTELKEKFKRMCDKSMIKKRYM 70
[Close]
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHSA_SOLTU (Chalcone synthase 1A OS=Solanum tuberosum GN=CHS1A PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 2.465e-30
Identity = 61/70 (87.14%), Postives = 66/70 (94.29%), Query Frame = 2 
Query:   35 MLTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            M+TV+E RKAQ AEGPATI+AIGT+TP NCVDQSTYPDYYFRITNSEH T+LKEKFKRMCDKSMIKKRYM
Sbjct:    1 MVTVEEYRKAQRAEGPATILAIGTSTPSNCVDQSTYPDYYFRITNSEHKTELKEKFKRMCDKSMIKKRYM 70
[Close]
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHS1_SOLLC (Chalcone synthase 1 OS=Solanum lycopersicum GN=CHS1 PE=2 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 2.465e-30
Identity = 61/70 (87.14%), Postives = 66/70 (94.29%), Query Frame = 2 
Query:   35 MLTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            M+TV+E RKAQ AEGPATI+AIGT+TP NCVDQSTYPDYYFRITNSEH T+LKEKFKRMCDKSMIKKRYM
Sbjct:    1 MVTVEEYRKAQRAEGPATILAIGTSTPSNCVDQSTYPDYYFRITNSEHKTELKEKFKRMCDKSMIKKRYM 70
[Close]
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHSY_PUELO (Chalcone synthase OS=Pueraria lobata GN=CHS PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 4.204e-30
Identity = 59/70 (84.29%), Postives = 67/70 (95.71%), Query Frame = 2 
Query:   35 MLTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            M++V E+R+AQ AEGPATI+AIGTA PPNCVDQSTYPDYYFRITNSEH+T+LKEKF+RMCDKSMIKKRYM
Sbjct:    1 MVSVAEIRQAQRAEGPATILAIGTANPPNCVDQSTYPDYYFRITNSEHMTELKEKFQRMCDKSMIKKRYM 70
[Close]
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHSY_ANTMA (Chalcone synthase OS=Antirrhinum majus GN=CHS PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 4.204e-30
Identity = 59/70 (84.29%), Postives = 67/70 (95.71%), Query Frame = 2 
Query:   35 MLTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            M+TV+EVR+AQ AEGPAT++AIGTATP NCVDQSTYPDYYFRITNSEH+T+LKEKFKRMCDKS IK+RYM
Sbjct:    1 MVTVEEVRRAQRAEGPATVLAIGTATPANCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSNIKRRYM 70
[Close]
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHSY_HYPAN (Chalcone synthase OS=Hypericum androsaemum PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 7.171e-30
Identity = 59/70 (84.29%), Postives = 65/70 (92.86%), Query Frame = 2 
Query:   35 MLTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            M+TV+EVRKAQ AEGPAT+MAIGTA PPNCVDQ+TYPDYYFRITNSEH  +LKEKF+RMCDKS IKKRYM
Sbjct:    1 MVTVEEVRKAQRAEGPATVMAIGTAVPPNCVDQATYPDYYFRITNSEHKAELKEKFQRMCDKSQIKKRYM 70
[Close]
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHSD_PETHY (Chalcone synthase D OS=Petunia hybrida GN=CHSD PE=3 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 1.598e-29
Identity = 59/70 (84.29%), Postives = 66/70 (94.29%), Query Frame = 2 
Query:   35 MLTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            M+TV+EVR AQ AEGPAT++AIGTATP NCVDQSTYPDYYFRIT+SEH T+LKEKFKR+CDKSMIKKRYM
Sbjct:    1 MVTVEEVRNAQRAEGPATVLAIGTATPSNCVDQSTYPDYYFRITDSEHKTELKEKFKRICDKSMIKKRYM 70
[Close]
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHS6_IPOBA (Chalcone synthase DII OS=Ipomoea batatas GN=CHS-DII PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 1.598e-29
Identity = 60/70 (85.71%), Postives = 66/70 (94.29%), Query Frame = 2 
Query:   35 MLTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            M+TV+EVRKAQ AEGPATI+AIGTATP NCV+QSTYPDYYFRITNSEH T+LKEKF+RMCDKSMI KRYM
Sbjct:    1 MVTVEEVRKAQRAEGPATILAIGTATPANCVNQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMITKRYM 70
[Close]
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHS3_CAMSI (Chalcone synthase 3 OS=Camellia sinensis GN=CHS3 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 2.725e-29
Identity = 58/70 (82.86%), Postives = 65/70 (92.86%), Query Frame = 2 
Query:   35 MLTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            M+TV++V +AQ A GPAT++AIGTATPPNCVDQSTYPDYYFRITNSEH  +LKEKFKRMCDKSMIKKRYM
Sbjct:    1 MVTVEDVWRAQRARGPATVLAIGTATPPNCVDQSTYPDYYFRITNSEHKVELKEKFKRMCDKSMIKKRYM 70
[Close]
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHS3_IPOBA (Chalcone synthase LF3 OS=Ipomoea batatas GN=CHS-LF3 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 3.559e-29
Identity = 60/70 (85.71%), Postives = 65/70 (92.86%), Query Frame = 2 
Query:   35 MLTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            M+TV EVRKAQ AEGPATI+AIGTATP NCV+QSTYPDYYFRITNSEH T+LKEKF+RMCDKSMI KRYM
Sbjct:    1 MVTVGEVRKAQRAEGPATILAIGTATPANCVNQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMITKRYM 70
The following BLAST results are available for this feature:
BLAST of EG358262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
CHSB_SOLTU2.465e-3087.14Chalcone synthase 1B OS=Solanum tuberosum GN=CHS1B... [more]
CHSA_SOLTU2.465e-3087.14Chalcone synthase 1A OS=Solanum tuberosum GN=CHS1A... [more]
CHS1_SOLLC2.465e-3087.14Chalcone synthase 1 OS=Solanum lycopersicum GN=CHS... [more]
CHSY_PUELO4.204e-3084.29Chalcone synthase OS=Pueraria lobata GN=CHS PE=2 S... [more]
CHSY_ANTMA4.204e-3084.29Chalcone synthase OS=Antirrhinum majus GN=CHS PE=3... [more]
CHSY_HYPAN7.171e-3084.29Chalcone synthase OS=Hypericum androsaemum PE=1 SV... [more]
CHSD_PETHY1.598e-2984.29Chalcone synthase D OS=Petunia hybrida GN=CHSD PE=... [more]
CHS6_IPOBA1.598e-2985.71Chalcone synthase DII OS=Ipomoea batatas GN=CHS-DI... [more]
CHS3_CAMSI2.725e-2982.86Chalcone synthase 3 OS=Camellia sinensis GN=CHS3 P... [more]
CHS3_IPOBA3.559e-2985.71Chalcone synthase LF3 OS=Ipomoea batatas GN=CHS-LF... [more]

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Properties
Property NameValue
Genbank description12d2 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0012d2, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358262 ID=EG358262; Name=EG358262; organism=Citrus sinensis; type=EST; length=244bp
ACCCGGGGAACCGTTGGATTGGAAGCAACAAACAATGTTGACCGTCGATG
AAGTTCGGAAGGCTCAAGGTGCCGAAGGTCCGGCCACGATCATGGCCATT
GGAACGGCAACCCCTCCGAATTGTGTTGATCAAAGCACGTATCCGGATTA
TTATTTTCGCATCACAAATAGTGAACACTTGACTGATCTTAAAGAGAAAT
TCAAGCGCATGTGTGACAAATCCATGATCAAGAAGCGATACATG
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