EG358262

Overview
NameEG358262
Unique NameEG358262
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length244
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHS8_IPOBA (Chalcone synthase DIV OS=Ipomoea batatas GN=CHS-DIV PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 4.648e-29
Identity = 59/70 (84.29%), Postives = 65/70 (92.86%), Query Frame = 2
Query:   35 MLTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            M+TV+EVRKAQ AEGPATI+AIGT TP NCV+QSTYPDYYFRITNSEH T+LKEKF+RMCDKSMI KRYM
Sbjct:    1 MVTVEEVRKAQRAEGPATILAIGTVTPANCVNQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMITKRYM 70          
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHS7_IPOBA (Chalcone synthase DIII OS=Ipomoea batatas GN=CHS-DIII PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 4.648e-29
Identity = 59/70 (84.29%), Postives = 66/70 (94.29%), Query Frame = 2
Query:   35 MLTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            M+TV+EVRKA+ AEGPATI+AIGTATP NCV+QSTYPDYYFRITNSEH T+LKEKF+RMCDKSMI KRYM
Sbjct:    1 MVTVEEVRKAKRAEGPATILAIGTATPANCVNQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMITKRYM 70          
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHS2_IPOBA (Chalcone synthase LF2 OS=Ipomoea batatas GN=CHS-LF2 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 4.648e-29
Identity = 59/70 (84.29%), Postives = 65/70 (92.86%), Query Frame = 2
Query:   35 MLTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            M+TV+EVRKAQ AEGPATI+AIGT TP NCV+QSTYPDYYFRITNSEH T+LKEKF+RMCDKSMI KRYM
Sbjct:    1 MVTVEEVRKAQRAEGPATILAIGTVTPANCVNQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMITKRYM 70          
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHS1_IPOBA (Chalcone synthase LF1 OS=Ipomoea batatas GN=CHS-LF1 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 4.648e-29
Identity = 59/70 (84.29%), Postives = 65/70 (92.86%), Query Frame = 2
Query:   35 MLTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            M+TV+EVRKAQ AEGPATI+AIGT TP NCV+QSTYPDYYFRITNSEH T+LKEKF+RMCDKSMI KRYM
Sbjct:    1 MVTVEEVRKAQRAEGPATILAIGTVTPANCVNQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMITKRYM 70          
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHSY_CATRO (Chalcone synthase OS=Catharanthus roseus GN=CHS PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.035e-28
Identity = 56/70 (80.00%), Postives = 65/70 (92.86%), Query Frame = 2
Query:   35 MLTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            M+ V+E+R AQ A+GPAT++AIGT+TP NCVDQSTYPDYYFRITNSEH T+LKEKFKRMC+KSMIKKRYM
Sbjct:    1 MVNVEEIRNAQRAQGPATVLAIGTSTPSNCVDQSTYPDYYFRITNSEHKTELKEKFKRMCEKSMIKKRYM 70          
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHS4_IPOBA (Chalcone synthase LF4 OS=Ipomoea batatas GN=CHS-LF4 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.035e-28
Identity = 58/70 (82.86%), Postives = 65/70 (92.86%), Query Frame = 2
Query:   35 MLTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            M+TV+EVRKAQ AEGPATI+AIGT TP NCV+QSTYPDYYFRITNSEH T+LKE+F+RMCDKSMI KRYM
Sbjct:    1 MVTVEEVRKAQRAEGPATILAIGTVTPANCVNQSTYPDYYFRITNSEHKTELKERFQRMCDKSMITKRYM 70          
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHSA_PEA (Chalcone synthase 1A OS=Pisum sativum GN=CHS-1A PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.766e-28
Identity = 56/70 (80.00%), Postives = 66/70 (94.29%), Query Frame = 2
Query:   35 MLTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            M+TV+E+R+AQ AEGPAT+ AIGTATP NCV+QSTYPD+YFRITNS+H T+LKEKF+RMCDKSMIKKRYM
Sbjct:    1 MVTVNEIRQAQRAEGPATVFAIGTATPQNCVEQSTYPDFYFRITNSQHKTELKEKFQRMCDKSMIKKRYM 70          
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHS2_MAIZE (Chalcone synthase C2 OS=Zea mays GN=C2 PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 6.712e-28
Identity = 57/69 (82.61%), Postives = 63/69 (91.30%), Query Frame = 2
Query:   38 LTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            +TV+EVRKAQ A GPAT++AIGTATP NCV Q+ YPDYYFRIT SEHLTDLKEKFKRMCDKSMI+KRYM
Sbjct:    6 VTVEEVRKAQRATGPATVLAIGTATPANCVYQADYPDYYFRITKSEHLTDLKEKFKRMCDKSMIRKRYM 74          
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHS6_PEA (Chalcone synthase 6 OS=Pisum sativum GN=CHS6 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 8.766e-28
Identity = 56/70 (80.00%), Postives = 65/70 (92.86%), Query Frame = 2
Query:   35 MLTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            M++V E+RKAQ AEGPATI+AIGTATP NCV+QSTYPD+YF+ITNSEH T LKEKF+RMCDKSMIK+RYM
Sbjct:    1 MVSVSEIRKAQRAEGPATILAIGTATPANCVEQSTYPDFYFKITNSEHKTVLKEKFQRMCDKSMIKRRYM 70          
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHS4_MEDSA (Chalcone synthase 4 OS=Medicago sativa GN=CHS4 PE=2 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 8.766e-28
Identity = 55/70 (78.57%), Postives = 65/70 (92.86%), Query Frame = 2
Query:   35 MLTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            M++V E+RKAQ AEGPATI+AIGTA P NCV+QSTYPD+YF+ITNSEH T+LKEKF+RMCDKSMIK+RYM
Sbjct:    1 MVSVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYM 70          
The following BLAST results are available for this feature:
BLAST of EG358262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
CHS8_IPOBA4.648e-2984.29Chalcone synthase DIV OS=Ipomoea batatas GN=CHS-DI... [more]
CHS7_IPOBA4.648e-2984.29Chalcone synthase DIII OS=Ipomoea batatas GN=CHS-D... [more]
CHS2_IPOBA4.648e-2984.29Chalcone synthase LF2 OS=Ipomoea batatas GN=CHS-LF... [more]
CHS1_IPOBA4.648e-2984.29Chalcone synthase LF1 OS=Ipomoea batatas GN=CHS-LF... [more]
CHSY_CATRO1.035e-2880.00Chalcone synthase OS=Catharanthus roseus GN=CHS PE... [more]
CHS4_IPOBA1.035e-2882.86Chalcone synthase LF4 OS=Ipomoea batatas GN=CHS-LF... [more]
CHSA_PEA1.766e-2880.00Chalcone synthase 1A OS=Pisum sativum GN=CHS-1A PE... [more]
CHS2_MAIZE6.712e-2882.61Chalcone synthase C2 OS=Zea mays GN=C2 PE=3 SV=1[more]
CHS6_PEA8.766e-2880.00Chalcone synthase 6 OS=Pisum sativum GN=CHS6 PE=2 ... [more]
CHS4_MEDSA8.766e-2878.57Chalcone synthase 4 OS=Medicago sativa GN=CHS4 PE=... [more]

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Properties
Property NameValue
Genbank description12d2 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0012d2, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358262 ID=EG358262; Name=EG358262; organism=Citrus sinensis; type=EST; length=244bp
ACCCGGGGAACCGTTGGATTGGAAGCAACAAACAATGTTGACCGTCGATG
AAGTTCGGAAGGCTCAAGGTGCCGAAGGTCCGGCCACGATCATGGCCATT
GGAACGGCAACCCCTCCGAATTGTGTTGATCAAAGCACGTATCCGGATTA
TTATTTTCGCATCACAAATAGTGAACACTTGACTGATCTTAAAGAGAAAT
TCAAGCGCATGTGTGACAAATCCATGATCAAGAAGCGATACATG
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