EG358262

Overview
NameEG358262
Unique NameEG358262
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length244
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHS2_MEDSA (Chalcone synthase 2 OS=Medicago sativa GN=CHS2 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 8.766e-28
Identity = 55/70 (78.57%), Postives = 65/70 (92.86%), Query Frame = 2
Query:   35 MLTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            M++V E+RKAQ AEGPATI+AIGTA P NCV+QSTYPD+YF+ITNSEH T+LKEKF+RMCDKSMIK+RYM
Sbjct:    1 MVSVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYM 70          
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHS7_SOYBN (Chalcone synthase 7 OS=Glycine max GN=CHS7 PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.145e-27
Identity = 56/70 (80.00%), Postives = 65/70 (92.86%), Query Frame = 2
Query:   35 MLTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            M++V E+R+AQ AEGPATI+AIGTA PPN VDQSTYPDYYFRITNS+H+T+LKEKF+RMCDKSMIK RYM
Sbjct:    1 MVSVAEIRQAQRAEGPATILAIGTANPPNRVDQSTYPDYYFRITNSDHMTELKEKFQRMCDKSMIKTRYM 70          
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHS2_PEA (Chalcone synthase 2 OS=Pisum sativum GN=CHS2 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.145e-27
Identity = 56/70 (80.00%), Postives = 64/70 (91.43%), Query Frame = 2
Query:   35 MLTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            M+TV E+RKAQ AEGPATI+AIGTA P NCV+QSTYPD+YF+ITNSEH T LKEKF+RMCDKSMIK+RYM
Sbjct:    1 MVTVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTVLKEKFQRMCDKSMIKRRYM 70          
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHS1_MAIZE (Chalcone synthase WHP1 OS=Zea mays GN=WHP1 PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.495e-27
Identity = 56/69 (81.16%), Postives = 62/69 (89.86%), Query Frame = 2
Query:   38 LTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            +TVDEVRK Q A GPAT++AIGTATP NCV Q+ YPDYYFRIT S+HLTDLKEKFKRMCDKSMI+KRYM
Sbjct:    6 VTVDEVRKGQRATGPATVLAIGTATPANCVYQADYPDYYFRITKSDHLTDLKEKFKRMCDKSMIRKRYM 74          
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHSY_VITVI (Chalcone synthase OS=Vitis vinifera GN=CHS PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.953e-27
Identity = 55/70 (78.57%), Postives = 64/70 (91.43%), Query Frame = 2
Query:   35 MLTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            M++V E+RKAQ AEGPAT++AIGTATP NCV Q+ YPDYYFRITNSEH+T+LKEKFKRMC+KSMI KRYM
Sbjct:    1 MVSVAEIRKAQRAEGPATVLAIGTATPANCVYQADYPDYYFRITNSEHMTELKEKFKRMCEKSMINKRYM 70          
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHSY_HYDMC (Chalcone synthase OS=Hydrangea macrophylla GN=CHS PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 2.551e-27
Identity = 56/70 (80.00%), Postives = 63/70 (90.00%), Query Frame = 2
Query:   35 MLTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            M+TV+EVRKAQ AEGPATI+AIGTATPPN VDQSTYPD+YFR+TNSEH  +LK KF+RMCD S IKKRYM
Sbjct:    1 MVTVEEVRKAQRAEGPATILAIGTATPPNYVDQSTYPDFYFRVTNSEHKKELKAKFQRMCDNSQIKKRYM 70          
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHS7_SORBI (Chalcone synthase 7 OS=Sorghum bicolor GN=CHS7 PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 2.551e-27
Identity = 55/69 (79.71%), Postives = 62/69 (89.86%), Query Frame = 2
Query:   38 LTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            +TV+EVRKAQ A GPAT++AIGTATP NCV Q+ YPDYYFRIT SEH+TDLKEKFKRMCDKS I+KRYM
Sbjct:    6 VTVEEVRKAQRATGPATVLAIGTATPANCVHQADYPDYYFRITKSEHMTDLKEKFKRMCDKSQIRKRYM 74          
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHS3_SORBI (Chalcone synthase 3 OS=Sorghum bicolor GN=CHS3 PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 2.551e-27
Identity = 55/69 (79.71%), Postives = 62/69 (89.86%), Query Frame = 2
Query:   38 LTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            +TV+EVRKAQ A GPAT++AIGTATP NCV Q+ YPDYYFRIT SEH+TDLKEKFKRMCDKS I+KRYM
Sbjct:    6 VTVEEVRKAQRATGPATVLAIGTATPANCVHQADYPDYYFRITKSEHMTDLKEKFKRMCDKSQIRKRYM 74          
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHSY_BETVE (Chalcone synthase OS=Betula verrucosa GN=CHS PE=2 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 3.331e-27
Identity = 53/70 (75.71%), Postives = 63/70 (90.00%), Query Frame = 2
Query:   35 MLTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            M +V+E+RKAQ A GPAT++AIGTATP NC+ Q+ YPDYYFRIT S+H+T+LKEKFKRMCDKSMIKKRYM
Sbjct:    1 MASVEEIRKAQRAHGPATVLAIGTATPSNCITQADYPDYYFRITKSDHMTELKEKFKRMCDKSMIKKRYM 70          
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHS7_PICMA (Chalcone synthase 7 OS=Picea mariana GN=CSF7 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 3.331e-27
Identity = 55/70 (78.57%), Postives = 63/70 (90.00%), Query Frame = 2
Query:   35 MLTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            M  ++  RKAQ A+GPATI+AIGTATPPN VDQSTYPDYYF+ITNSEH+T+LKEKF+RMCDKS IKKRYM
Sbjct:    6 MADLEAFRKAQRADGPATILAIGTATPPNAVDQSTYPDYYFKITNSEHMTELKEKFQRMCDKSAIKKRYM 75          
The following BLAST results are available for this feature:
BLAST of EG358262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
CHS2_MEDSA8.766e-2878.57Chalcone synthase 2 OS=Medicago sativa GN=CHS2 PE=... [more]
CHS7_SOYBN1.145e-2780.00Chalcone synthase 7 OS=Glycine max GN=CHS7 PE=3 SV... [more]
CHS2_PEA1.145e-2780.00Chalcone synthase 2 OS=Pisum sativum GN=CHS2 PE=2 ... [more]
CHS1_MAIZE1.495e-2781.16Chalcone synthase WHP1 OS=Zea mays GN=WHP1 PE=3 SV... [more]
CHSY_VITVI1.953e-2778.57Chalcone synthase OS=Vitis vinifera GN=CHS PE=2 SV... [more]
CHSY_HYDMC2.551e-2780.00Chalcone synthase OS=Hydrangea macrophylla GN=CHS ... [more]
CHS7_SORBI2.551e-2779.71Chalcone synthase 7 OS=Sorghum bicolor GN=CHS7 PE=... [more]
CHS3_SORBI2.551e-2779.71Chalcone synthase 3 OS=Sorghum bicolor GN=CHS3 PE=... [more]
CHSY_BETVE3.331e-2775.71Chalcone synthase OS=Betula verrucosa GN=CHS PE=2 ... [more]
CHS7_PICMA3.331e-2778.57Chalcone synthase 7 OS=Picea mariana GN=CSF7 PE=2 ... [more]

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Properties
Property NameValue
Genbank description12d2 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0012d2, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358262 ID=EG358262; Name=EG358262; organism=Citrus sinensis; type=EST; length=244bp
ACCCGGGGAACCGTTGGATTGGAAGCAACAAACAATGTTGACCGTCGATG
AAGTTCGGAAGGCTCAAGGTGCCGAAGGTCCGGCCACGATCATGGCCATT
GGAACGGCAACCCCTCCGAATTGTGTTGATCAAAGCACGTATCCGGATTA
TTATTTTCGCATCACAAATAGTGAACACTTGACTGATCTTAAAGAGAAAT
TCAAGCGCATGTGTGACAAATCCATGATCAAGAAGCGATACATG
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