EG358262

Overview
NameEG358262
Unique NameEG358262
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length244
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHSY_ORYSJ (Chalcone synthase OS=Oryza sativa subsp. japonica GN=CHS PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 2.159e-26
Identity = 53/69 (76.81%), Postives = 62/69 (89.86%), Query Frame = 2
Query:   38 LTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            +TV+EVR+AQ AEGPAT++AIGTATP NCV Q+ YPDYYFRIT SEH+ +LKEKFKRMCDKS I+KRYM
Sbjct:    5 VTVEEVRRAQRAEGPATVLAIGTATPANCVYQADYPDYYFRITKSEHMVELKEKFKRMCDKSQIRKRYM 73          
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHSY_ORYSI (Chalcone synthase OS=Oryza sativa subsp. indica GN=CHS PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 2.159e-26
Identity = 53/69 (76.81%), Postives = 62/69 (89.86%), Query Frame = 2
Query:   38 LTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            +TV+EVR+AQ AEGPAT++AIGTATP NCV Q+ YPDYYFRIT SEH+ +LKEKFKRMCDKS I+KRYM
Sbjct:    5 VTVEEVRRAQRAEGPATVLAIGTATPANCVYQADYPDYYFRITKSEHMVELKEKFKRMCDKSQIRKRYM 73          
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHS9_DAUCA (Chalcone synthase 9 OS=Daucus carota GN=CHS9 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 4.810e-26
Identity = 54/70 (77.14%), Postives = 61/70 (87.14%), Query Frame = 2
Query:   35 MLTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            M+TV+E RKAQ AEGPAT++AIGTATPPNCVDQS Y DYYFRITNSE   +LKEKF+RMC+KSMI  RYM
Sbjct:    1 MVTVNEFRKAQRAEGPATVLAIGTATPPNCVDQSAYADYYFRITNSEDKPELKEKFRRMCEKSMINTRYM 70          
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHS3_GERHY (Chalcone synthase 3 OS=Gerbera hybrida GN=CHS3 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 4.810e-26
Identity = 52/70 (74.29%), Postives = 62/70 (88.57%), Query Frame = 2
Query:   35 MLTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            ++ V+ +RKAQ AEGPATI+AIGTATP NCV Q+ YPDYYFR+T SEH+ DLKEKF+RMCDKSMI+KRYM
Sbjct:    7 VIDVETIRKAQRAEGPATILAIGTATPANCVYQADYPDYYFRVTESEHMVDLKEKFQRMCDKSMIRKRYM 76          
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHS2_CITSI (Chalcone synthase 2 OS=Citrus sinensis GN=CHS2 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 4.810e-26
Identity = 53/70 (75.71%), Postives = 62/70 (88.57%), Query Frame = 2
Query:   35 MLTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            M TV E+R AQ A+GPAT++AIGTATP + V+Q+ YPDYYFRIT SEH+T+LKEKFKRMCDKSMIKKRYM
Sbjct:    1 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYM 70          
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHS1_HORVU (Chalcone synthase 1 OS=Hordeum vulgare GN=CHS1 PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 4.810e-26
Identity = 52/69 (75.36%), Postives = 61/69 (88.41%), Query Frame = 2
Query:   38 LTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            +TV+EVR AQ AEGPAT++AIGTATP NCV Q+ YPDYYF+IT S+H+ DLKEKFKRMCDKS I+KRYM
Sbjct:    5 MTVEEVRNAQRAEGPATVLAIGTATPANCVYQADYPDYYFKITKSDHMADLKEKFKRMCDKSQIRKRYM 73          
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHS1_DAUCA (Chalcone synthase 1 OS=Daucus carota GN=CHS1 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 4.810e-26
Identity = 54/70 (77.14%), Postives = 61/70 (87.14%), Query Frame = 2
Query:   35 MLTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            M+TV+E RKAQ AEGPAT++AIGTATPPNCVDQS Y DYYFRITNSE   +LKEKF+RMC+KSMI  RYM
Sbjct:    1 MVTVNEFRKAQRAEGPATVLAIGTATPPNCVDQSAYADYYFRITNSEDKPELKEKFRRMCEKSMINTRYM 70          
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHSY_CHRAE (Chalcone synthase OS=Chrysosplenium americanum GN=CHS PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 6.282e-26
Identity = 53/67 (79.10%), Postives = 61/67 (91.04%), Query Frame = 2
Query:   44 VDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            ++E+R AQ AEGPATI+AIGTATP NCV Q+ YPD+YFRITNSEH T+LKEKF+RMCDKSMIKKRYM
Sbjct:    7 MEEIRNAQRAEGPATILAIGTATPANCVIQADYPDFYFRITNSEHKTELKEKFQRMCDKSMIKKRYM 73          
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHS1_TRISU (Chalcone synthase 1 OS=Trifolium subterraneum GN=CHS1 PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 6.282e-26
Identity = 53/70 (75.71%), Postives = 63/70 (90.00%), Query Frame = 2
Query:   35 MLTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            M++V E+RKAQ AEGPATI+AIGTA PPN V+Q+TYPD+YF+ITNSEH  +LKEKF+RMCDKSMIK RYM
Sbjct:    1 MVSVAEIRKAQRAEGPATILAIGTANPPNRVEQATYPDFYFKITNSEHKVELKEKFQRMCDKSMIKSRYM 70          
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHSY_DIACA (Chalcone synthase OS=Dianthus caryophyllus GN=CHS PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 8.205e-26
Identity = 50/70 (71.43%), Postives = 63/70 (90.00%), Query Frame = 2
Query:   35 MLTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            M +++E+R+A  A+GPATI+AIGTATPPN + Q+ YPDYYFR+T SEH+T+LKEKF+RMCDKSMIKKRYM
Sbjct:    1 MASIEEIRQAPRADGPATILAIGTATPPNAIYQADYPDYYFRVTKSEHMTELKEKFRRMCDKSMIKKRYM 70          
The following BLAST results are available for this feature:
BLAST of EG358262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
CHSY_ORYSJ2.159e-2676.81Chalcone synthase OS=Oryza sativa subsp. japonica ... [more]
CHSY_ORYSI2.159e-2676.81Chalcone synthase OS=Oryza sativa subsp. indica GN... [more]
CHS9_DAUCA4.810e-2677.14Chalcone synthase 9 OS=Daucus carota GN=CHS9 PE=2 ... [more]
CHS3_GERHY4.810e-2674.29Chalcone synthase 3 OS=Gerbera hybrida GN=CHS3 PE=... [more]
CHS2_CITSI4.810e-2675.71Chalcone synthase 2 OS=Citrus sinensis GN=CHS2 PE=... [more]
CHS1_HORVU4.810e-2675.36Chalcone synthase 1 OS=Hordeum vulgare GN=CHS1 PE=... [more]
CHS1_DAUCA4.810e-2677.14Chalcone synthase 1 OS=Daucus carota GN=CHS1 PE=2 ... [more]
CHSY_CHRAE6.282e-2679.10Chalcone synthase OS=Chrysosplenium americanum GN=... [more]
CHS1_TRISU6.282e-2675.71Chalcone synthase 1 OS=Trifolium subterraneum GN=C... [more]
CHSY_DIACA8.205e-2671.43Chalcone synthase OS=Dianthus caryophyllus GN=CHS ... [more]

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Properties
Property NameValue
Genbank description12d2 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0012d2, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358262 ID=EG358262; Name=EG358262; organism=Citrus sinensis; type=EST; length=244bp
ACCCGGGGAACCGTTGGATTGGAAGCAACAAACAATGTTGACCGTCGATG
AAGTTCGGAAGGCTCAAGGTGCCGAAGGTCCGGCCACGATCATGGCCATT
GGAACGGCAACCCCTCCGAATTGTGTTGATCAAAGCACGTATCCGGATTA
TTATTTTCGCATCACAAATAGTGAACACTTGACTGATCTTAAAGAGAAAT
TCAAGCGCATGTGTGACAAATCCATGATCAAGAAGCGATACATG
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