EG358262

Overview
NameEG358262
Unique NameEG358262
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length244
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHS2_RUTGR (Chalcone synthase 2 OS=Ruta graveolens GN=CHS2 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 8.205e-26
Identity = 52/69 (75.36%), Postives = 62/69 (89.86%), Query Frame = 2
Query:   38 LTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            +TV+E+RKAQ A+GPA ++AIGTATP N V Q+ YPDYYFRIT SEH+T+LKEKFKRMCDKSMI+KRYM
Sbjct:    4 VTVEEIRKAQRADGPAAVLAIGTATPANYVTQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIRKRYM 72          
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHS6_TRISU (Chalcone synthase 6 OS=Trifolium subterraneum GN=CHS6 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.400e-25
Identity = 53/70 (75.71%), Postives = 63/70 (90.00%), Query Frame = 2
Query:   35 MLTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            M++V E+RKAQ AEGPATI+AIGTA P N V+Q+TYPD+YF+ITNSEH T+LKEKF+RMCDKSMIK RYM
Sbjct:    1 MVSVAEIRKAQRAEGPATILAIGTANPANKVEQATYPDFYFKITNSEHKTELKEKFQRMCDKSMIKSRYM 70          
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHS8_BROFI (Chalcone synthase 8 OS=Bromheadia finlaysoniana GN=CHS8 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.828e-25
Identity = 51/67 (76.12%), Postives = 61/67 (91.04%), Query Frame = 2
Query:   44 VDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            ++E+R+AQ AEGPA ++AIGT+TPPN + Q+ YPDYYFRIT SEHLT+LKEKFKRMCDKSMIKKRYM
Sbjct:    5 MEEIRQAQRAEGPAAVLAIGTSTPPNALYQADYPDYYFRITKSEHLTELKEKFKRMCDKSMIKKRYM 71          
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHS4_BROFI (Chalcone synthase 4 OS=Bromheadia finlaysoniana GN=CHS4 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.828e-25
Identity = 51/67 (76.12%), Postives = 61/67 (91.04%), Query Frame = 2
Query:   44 VDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            ++E+R+AQ AEGPA ++AIGT+TPPN + Q+ YPDYYFRIT SEHLT+LKEKFKRMCDKSMIKKRYM
Sbjct:    5 MEEIRQAQRAEGPAAVLAIGTSTPPNALYQADYPDYYFRITKSEHLTELKEKFKRMCDKSMIKKRYM 71          
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHS3_BROFI (Chalcone synthase 3 OS=Bromheadia finlaysoniana GN=CHS3 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.828e-25
Identity = 51/67 (76.12%), Postives = 61/67 (91.04%), Query Frame = 2
Query:   44 VDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            ++E+R+AQ AEGPA ++AIGT+TPPN + Q+ YPDYYFRIT SEHLT+LKEKFKRMCDKSMIKKRYM
Sbjct:    5 MEEIRQAQRAEGPAAVLAIGTSTPPNALYQADYPDYYFRITKSEHLTELKEKFKRMCDKSMIKKRYM 71          
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHSF_PETHY (Chalcone synthase F OS=Petunia hybrida GN=CHSF PE=2 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 3.118e-25
Identity = 51/70 (72.86%), Postives = 64/70 (91.43%), Query Frame = 2
Query:   35 MLTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            M++V+EVR+AQ  EGPATI+AIGTATP NCVDQ+TYPDY+FR+TNS+H T+LKEKFKRM ++SMIKK Y+
Sbjct:    1 MVSVEEVRRAQRREGPATILAIGTATPLNCVDQTTYPDYFFRVTNSDHKTELKEKFKRMFERSMIKKSYL 70          
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHS4_TRISU (Chalcone synthase 4 (Fragment) OS=Trifolium subterraneum GN=CHS4 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 3.118e-25
Identity = 52/70 (74.29%), Postives = 62/70 (88.57%), Query Frame = 2
Query:   35 MLTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            M++V E+RKAQ AEGPATI+AIGTA P N V+Q+TYPD+YF+ITNSEH  +LKEKF+RMCDKSMIK RYM
Sbjct:    1 MVSVSEIRKAQRAEGPATILAIGTANPANKVEQATYPDFYFKITNSEHKVELKEKFQRMCDKSMIKSRYM 70          
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHS2_TRISU (Chalcone synthase 2 OS=Trifolium subterraneum GN=CHS2 PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 3.118e-25
Identity = 52/70 (74.29%), Postives = 62/70 (88.57%), Query Frame = 2
Query:   35 MLTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            M++V E+RKAQ AEGPATI+AIGTA P N V+Q+TYPD+YF+ITNSEH  +LKEKF+RMCDKSMIK RYM
Sbjct:    1 MVSVSEIRKAQRAEGPATILAIGTANPANRVEQATYPDFYFKITNSEHKVELKEKFQRMCDKSMIKSRYM 70          
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHS1_CICAR (Chalcone synthase 1 OS=Cicer arietinum GN=CHS1 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 3.118e-25
Identity = 52/70 (74.29%), Postives = 62/70 (88.57%), Query Frame = 2
Query:   35 MLTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            M++V E+RKAQ AEGPATI+AIGTA P N V+QSTYPD+YF+ITNSEH  +LK+KF+RMCDKSMIK RYM
Sbjct:    1 MVSVSEIRKAQRAEGPATILAIGTANPSNRVEQSTYPDFYFKITNSEHKVELKQKFQRMCDKSMIKSRYM 70          
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHS1_RUTGR (Chalcone synthase 1 OS=Ruta graveolens GN=CHS1 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.072e-25
Identity = 51/69 (73.91%), Postives = 61/69 (88.41%), Query Frame = 2
Query:   38 LTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            +TV+ +RKAQ A+GPA ++AIGTATP N V Q+ YPDYYFRIT SEH+T+LKEKFKRMCDKSMI+KRYM
Sbjct:    4 VTVEAIRKAQRADGPAAVLAIGTATPANYVTQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIRKRYM 72          
The following BLAST results are available for this feature:
BLAST of EG358262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
CHS2_RUTGR8.205e-2675.36Chalcone synthase 2 OS=Ruta graveolens GN=CHS2 PE=... [more]
CHS6_TRISU1.400e-2575.71Chalcone synthase 6 OS=Trifolium subterraneum GN=C... [more]
CHS8_BROFI1.828e-2576.12Chalcone synthase 8 OS=Bromheadia finlaysoniana GN... [more]
CHS4_BROFI1.828e-2576.12Chalcone synthase 4 OS=Bromheadia finlaysoniana GN... [more]
CHS3_BROFI1.828e-2576.12Chalcone synthase 3 OS=Bromheadia finlaysoniana GN... [more]
CHSF_PETHY3.118e-2572.86Chalcone synthase F OS=Petunia hybrida GN=CHSF PE=... [more]
CHS4_TRISU3.118e-2574.29Chalcone synthase 4 (Fragment) OS=Trifolium subter... [more]
CHS2_TRISU3.118e-2574.29Chalcone synthase 2 OS=Trifolium subterraneum GN=C... [more]
CHS1_CICAR3.118e-2574.29Chalcone synthase 1 OS=Cicer arietinum GN=CHS1 PE=... [more]
CHS1_RUTGR4.072e-2573.91Chalcone synthase 1 OS=Ruta graveolens GN=CHS1 PE=... [more]

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Properties
Property NameValue
Genbank description12d2 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0012d2, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358262 ID=EG358262; Name=EG358262; organism=Citrus sinensis; type=EST; length=244bp
ACCCGGGGAACCGTTGGATTGGAAGCAACAAACAATGTTGACCGTCGATG
AAGTTCGGAAGGCTCAAGGTGCCGAAGGTCCGGCCACGATCATGGCCATT
GGAACGGCAACCCCTCCGAATTGTGTTGATCAAAGCACGTATCCGGATTA
TTATTTTCGCATCACAAATAGTGAACACTTGACTGATCTTAAAGAGAAAT
TCAAGCGCATGTGTGACAAATCCATGATCAAGAAGCGATACATG
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