EG358262

Overview
NameEG358262
Unique NameEG358262
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length244
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHS1_GERHY (Chalcone synthase 1 OS=Gerbera hybrida GN=CHS1 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.072e-25
Identity = 52/64 (81.25%), Postives = 57/64 (89.06%), Query Frame = 2
Query:   53 VRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            +R AQ AEGPATI+AIGTATP NCV Q+ YPDYYFRIT SEH+ DLKEKFKRMCDKSMI+KRYM
Sbjct:   10 IRDAQRAEGPATILAIGTATPANCVYQADYPDYYFRITKSEHMVDLKEKFKRMCDKSMIRKRYM 73          
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHSG_PETHY (Chalcone synthase G OS=Petunia hybrida GN=CHSG PE=2 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 5.318e-25
Identity = 51/70 (72.86%), Postives = 60/70 (85.71%), Query Frame = 2
Query:   35 MLTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            M TV+E+RKAQ AEGPAT++AIGTA P NCVDQS YPD+ FRIT S+H T+LKEKFK MC+ SMIKKRY+
Sbjct:    1 MATVEEIRKAQRAEGPATVLAIGTANPSNCVDQSAYPDFLFRITTSDHKTELKEKFKHMCEGSMIKKRYL 70          
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: THS3_ARAHY (Stilbene synthase 3 OS=Arachis hypogaea PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 6.946e-25
Identity = 47/70 (67.14%), Postives = 62/70 (88.57%), Query Frame = 2
Query:   35 MLTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            M++V  +RK Q AEGPAT++AIGTA PPNC+DQSTY DYYFR+TNSEH+TDLK+KF+R+C+++ IK R+M
Sbjct:    1 MVSVSGIRKVQRAEGPATVLAIGTANPPNCIDQSTYADYYFRVTNSEHMTDLKKKFQRICERTQIKNRHM 70          
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHS2_DAUCA (Chalcone synthase 2 OS=Daucus carota GN=CHS2 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 6.946e-25
Identity = 50/67 (74.63%), Postives = 60/67 (89.55%), Query Frame = 2
Query:   44 VDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            ++E+RK Q A+GPA I+AIGTATP NCV Q+ YPDYYFRITNSEH++DLK KFKRMC+KSMI+KRYM
Sbjct:    8 IEEIRKRQRAQGPANILAIGTATPSNCVYQADYPDYYFRITNSEHMSDLKLKFKRMCEKSMIRKRYM 74          
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHSY_PETCR (Chalcone synthase OS=Petroselinum crispum GN=CHS PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 9.071e-25
Identity = 50/67 (74.63%), Postives = 59/67 (88.06%), Query Frame = 2
Query:   44 VDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            ++E+R  Q A+GPA I+AIGTATP NCV Q+ YPDYYFRITNSEH+TDLK KFKRMC+KSMI+KRYM
Sbjct:    9 IEEIRNRQRAQGPANILAIGTATPSNCVYQADYPDYYFRITNSEHMTDLKLKFKRMCEKSMIRKRYM 75          
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHS3_TRISU (Chalcone synthase 3 OS=Trifolium subterraneum GN=CHS3 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 9.071e-25
Identity = 51/70 (72.86%), Postives = 62/70 (88.57%), Query Frame = 2
Query:   35 MLTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            M++V E+R+AQ AEGPATI+AIGTA P N V+Q+TYPD+YF+ITNSEH  +LKEKF+RMCDKSMIK RYM
Sbjct:    1 MVSVSEIRQAQRAEGPATILAIGTANPANKVEQATYPDFYFKITNSEHKVELKEKFQRMCDKSMIKSRYM 70          
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: VPS_HUMLU (Phloroisovalerophenone synthase OS=Humulus lupulus GN=VPS PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.185e-24
Identity = 48/69 (69.57%), Postives = 62/69 (89.86%), Query Frame = 2
Query:   38 LTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            +TV+++RKAQ AEGPATI+AIGTA P NC +Q+ +PDYYFR+T SEH+TDLK+KF+RMC+KS IKKRY+
Sbjct:    4 VTVEQIRKAQRAEGPATILAIGTAVPANCFNQADFPDYYFRVTKSEHMTDLKKKFQRMCEKSTIKKRYL 72          
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: THS1_ARAHY (Stilbene synthase 1 OS=Arachis hypogaea PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.547e-24
Identity = 47/70 (67.14%), Postives = 61/70 (87.14%), Query Frame = 2
Query:   35 MLTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            M++V  +RK Q AEGPAT++AIGTA PPNCVDQSTY DYYFR+TN EH+TDLK+KF+R+C+++ IK R+M
Sbjct:    1 MVSVSGIRKVQRAEGPATVLAIGTANPPNCVDQSTYADYYFRVTNGEHMTDLKKKFQRICERTQIKNRHM 70          
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHSY_CALCH (Chalcone synthase OS=Callistephus chinensis GN=CHS PE=2 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 1.547e-24
Identity = 50/69 (72.46%), Postives = 59/69 (85.51%), Query Frame = 2
Query:   38 LTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            + +  +R+AQ  +GPATI+AIGTATP NCV Q+ YPDYYFRIT SEH+ DLKEKFKRMCDKSMI+KRYM
Sbjct:    5 IDIAAIREAQRRQGPATILAIGTATPSNCVYQADYPDYYFRITKSEHMVDLKEKFKRMCDKSMIRKRYM 73          
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHS5_TRISU (Chalcone synthase 5 OS=Trifolium subterraneum GN=CHS5 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.547e-24
Identity = 51/70 (72.86%), Postives = 62/70 (88.57%), Query Frame = 2
Query:   35 MLTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            M++V E+R+AQ AEGPATI+AIGTA P N V+Q+TYPD+YF+ITNSEH  +LKEKF+RMCDKSMIK RYM
Sbjct:    1 MVSVAEIRQAQRAEGPATILAIGTANPANKVEQATYPDFYFKITNSEHKVELKEKFQRMCDKSMIKSRYM 70          
The following BLAST results are available for this feature:
BLAST of EG358262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
CHS1_GERHY4.072e-2581.25Chalcone synthase 1 OS=Gerbera hybrida GN=CHS1 PE=... [more]
CHSG_PETHY5.318e-2572.86Chalcone synthase G OS=Petunia hybrida GN=CHSG PE=... [more]
THS3_ARAHY6.946e-2567.14Stilbene synthase 3 OS=Arachis hypogaea PE=2 SV=1[more]
CHS2_DAUCA6.946e-2574.63Chalcone synthase 2 OS=Daucus carota GN=CHS2 PE=2 ... [more]
CHSY_PETCR9.071e-2574.63Chalcone synthase OS=Petroselinum crispum GN=CHS P... [more]
CHS3_TRISU9.071e-2572.86Chalcone synthase 3 OS=Trifolium subterraneum GN=C... [more]
VPS_HUMLU1.185e-2469.57Phloroisovalerophenone synthase OS=Humulus lupulus... [more]
THS1_ARAHY1.547e-2467.14Stilbene synthase 1 OS=Arachis hypogaea PE=2 SV=1[more]
CHSY_CALCH1.547e-2472.46Chalcone synthase OS=Callistephus chinensis GN=CHS... [more]
CHS5_TRISU1.547e-2472.86Chalcone synthase 5 OS=Trifolium subterraneum GN=C... [more]

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Properties
Property NameValue
Genbank description12d2 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0012d2, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358262 ID=EG358262; Name=EG358262; organism=Citrus sinensis; type=EST; length=244bp
ACCCGGGGAACCGTTGGATTGGAAGCAACAAACAATGTTGACCGTCGATG
AAGTTCGGAAGGCTCAAGGTGCCGAAGGTCCGGCCACGATCATGGCCATT
GGAACGGCAACCCCTCCGAATTGTGTTGATCAAAGCACGTATCCGGATTA
TTATTTTCGCATCACAAATAGTGAACACTTGACTGATCTTAAAGAGAAAT
TCAAGCGCATGTGTGACAAATCCATGATCAAGAAGCGATACATG
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