DY257378

Overview
NameDY257378
Unique NameDY257378
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length899
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY257378 vs. ExPASy Swiss-Prot
Match: CP3A8_MACFA (Cytochrome P450 3A8 OS=Macaca fascicularis GN=CYP3A8 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.590e-14
Identity = 44/155 (28.39%), Postives = 79/155 (50.97%), Query Frame = 2
Query:    5 KSSKDFLQTLLELQQ----QGDYSLSMDQIKALFMDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRF 457
            K   DFLQ +++ Q     +   +LS  ++ A  +       +TTS  + + + EL   P+V +K + E++ V+   +      + ++ YL+ +V ETLR+ P A  L  R       ++G  IPKG  + I ++A+  +P+ W  P+ F P+RF
Sbjct:  266 KHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIIYELATHPDVQQKLQEEIDTVLPNKAPPTYDTVLQMEYLDMVVNETLRIFPIAMRL-ERVCKKDVEINGIFIPKGVVVMIPSYALHHDPKYWPEPEKFLPERF 419          

HSP 2 Score: 30.0314 bits (66), Expect = 1.590e-14
Identity = 22/77 (28.57%), Postives = 37/77 (48.05%), Query Frame = 3
Query:  465 MSKRDFRGNNFN-----YLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGTKFDLSDKLLMALKKSEPLVV 680
            + +R  + NN N     Y PFGSG R C G+  A   +   +  +L  F +   + T+  L  +L   L+  +P+V+
Sbjct:  415 LPERFSKKNNDNIDPYIYTPFGSGPRNCIGMRFALMNMKLAIIRVLQNFSFKPCKETQIPLKLRLGGLLQTEKPIVL 491          
BLAST of DY257378 vs. ExPASy Swiss-Prot
Match: CP2R1_MOUSE (Vitamin D 25-hydroxylase OS=Mus musculus GN=Cyp2r1 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.590e-14
Identity = 35/122 (28.69%), Postives = 66/122 (54.10%), Query Frame = 2
Query:   98 DVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLE 463
            ++ I  T+TT+  + WA+  +   P +  +   E++ +V  +      +  K+PY EA++ E LR     PL      S  + + GY+IPKG+T+  N +++  + + W++P  F P+RFL+
Sbjct:  306 ELIIAGTETTTNVLRWAILFMALYPNIQGQVHKEIDLIVGHNRRPSWEYKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWKDPDMFYPERFLD 427          

HSP 2 Score: 26.5646 bits (57), Expect = 1.590e-14
Identity = 18/58 (31.03%), Postives = 25/58 (43.10%), Query Frame = 3
Query:  504 LPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGTKFDLSDKLLMALKKSEPLV 677
            +PF  GRR C G  LA   +     +LL  F    P     +L  +L M L+    L+
Sbjct:  439 IPFSLGRRHCLGEQLARMEMFLFFTSLLQQFHLHFPHELVPNLKPRLGMTLQPQPYLI 496          
BLAST of DY257378 vs. ExPASy Swiss-Prot
Match: CP3AV_MESAU (Cytochrome P450 3A31 OS=Mesocricetus auratus GN=CYP3A31 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.590e-14
Identity = 45/159 (28.30%), Postives = 79/159 (49.69%), Query Frame = 2
Query:    5 KSSKDFLQTLLELQQQGDYS---LSMDQIKALFMDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVK 472
            K   DFLQ ++        S   LS  +I A  +       DTTS T+ +A+  L   P+V +K + E++  +   +      + ++ YL+ ++ ETLRL+P    L  R       + G  +PKGS + +  +A+  +P+ W  P+ F+P+RF ++ K
Sbjct:  265 KHRVDFLQLMMNSHDNSKDSHKALSDMEIIAQSIIFIFAGYDTTSSTLSFALYLLATHPDVQKKLQEEIDIALPNKARPSYDKVMEMEYLDMVLNETLRLYPIGSRL-ERVCKQDVEMDGVFVPKGSIVMVPVFALHYDPQYWPEPEKFRPERFSKENK 422          

HSP 2 Score: 28.8758 bits (63), Expect = 1.590e-14
Identity = 17/65 (26.15%), Postives = 30/65 (46.15%), Query Frame = 3
Query:  501 YLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGTKFDLSDKLLMALKKSEPLVVIPTPR 695
            +LPFG+G R C G+  A   +   L  +L  F     + T+  +       L+  +P+++   PR
Sbjct:  430 FLPFGNGPRNCIGMRFALMNMKLALTKVLQNFSLQPCKETQIPMKLSRKAMLQPEKPIILKVVPR 494          
BLAST of DY257378 vs. ExPASy Swiss-Prot
Match: CP51_WHEAT (Obtusifoliol 14-alpha demethylase (Fragment) OS=Triticum aestivum GN=CYP51 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.594e-14
Identity = 43/157 (27.39%), Postives = 75/157 (47.77%), Query Frame = 2
Query:    2 GKSSKDFLQTLLELQQQGDYSLSMDQIKALFMDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDS-VVEEFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPS----ATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRF 457
            G+S +D LQ  ++ + +     +  ++  L +        T+SIT  W  + LL+  +   +A  E ++V+ R    ++   LA++  L   +KE LRLHPP  +L  +  S     T     + IPKG  +  +     R P +++NP  + PDRF
Sbjct:  214 GQSEEDMLQCFIDSKYKNGRQTTESEVTGLLIAALFAGQHTSSITSTWTGAYLLKFQQYFAEAVEEQKEVMKRHGDKIDHDILAEMDVLYRCIKEALRLHPPLIMLLRQSHSDFSVTTREGKEFDIPKGHIVATSPAFANRLPHIFKNPDSYDPDRF 370          

HSP 2 Score: 31.5722 bits (70), Expect = 1.594e-14
Identity = 15/38 (39.47%), Postives = 21/38 (55.26%), Query Frame = 3
Query:  495 FNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSL 608
            F+Y+ FG GR  C G P A   +  +  +LL  FE+ L
Sbjct:  383 FSYISFGGGRHGCLGEPFAYLQIKAIWTHLLRNFEFEL 420          
BLAST of DY257378 vs. ExPASy Swiss-Prot
Match: C11B2_RAT (Cytochrome P450 11B2, mitochondrial OS=Rattus norvegicus GN=Cyp11b2 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.896e-14
Identity = 50/152 (32.89%), Postives = 82/152 (53.95%), Query Frame = 2
Query:    8 SSKDFLQTLLELQQQGDYSLSMDQIKALFMDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLE 463
            SS+ +   +  L  QG  +L +D IKA  M++  GS DTT+I +   + EL + P+V +  R E     A  +   +  ++ LP L A +KETLRL+P    L  R  ++   L  Y +P G+ + +  +++ RNP V+  P+ + P R+LE
Sbjct:  292 SSQTYSGIVAALITQG--ALPLDAIKANSMELTAGSVDTTAIPLVMTLFELARNPDVQQALRQETLAAEASIAANPQKAMSDLPLLRAALKETLRLYPVGGFL-ERILNSDLVLQNYHVPAGTLVLLYLYSMGRNPAVFPRPERYMPQRWLE 440          
BLAST of DY257378 vs. ExPASy Swiss-Prot
Match: CP3AF_CAVPO (Cytochrome P450 3A15 OS=Cavia porcellus GN=CYP3A15 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.066e-14
Identity = 44/155 (28.39%), Postives = 79/155 (50.97%), Query Frame = 2
Query:    5 KSSKDFLQTLLELQQQGDY----SLSMDQIKALFMDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRF 457
            K   +FLQ +L  Q   D     +LS  +I A  +       +T+S T+   M  L   P+V +K   E+++ +   +      + ++ YL+ +V ETLRL+P A  +  R       ++G + PKG+ + I ++A+ R+ + W  P +F+P+RF
Sbjct:  266 KQRVNFLQMMLNSQNFKDTESHKALSDVEILAQSIIFIFAGYETSSSTLSCIMYSLATHPDVQKKLHQEIDKTLPNKAFPTYDVMMEMEYLDMVVNETLRLYPVANRI-ERMSKKDFEINGMSFPKGTLVMIPSFALHRDSKYWPEPDEFRPERF 419          

HSP 2 Score: 28.1054 bits (61), Expect = 2.066e-14
Identity = 18/60 (30.00%), Postives = 29/60 (48.33%), Query Frame = 3
Query:  501 YLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGTKFDLSDKLLMALKKSEPLVV 680
            Y+PFG+G R C G  +A   +   L  LL  F +   + T+  L       L+  +PL++
Sbjct:  432 YMPFGNGPRNCIGRRMALMNLKLALIRLLQNFSFYPCKETQIPLRLSSEALLQPEKPLIL 491          
BLAST of DY257378 vs. ExPASy Swiss-Prot
Match: CP2AD_HUMAN (Cytochrome P450 2A13 OS=Homo sapiens GN=CYP2A13 PE=1 SV=3)

HSP 1 Score: 76.2554 bits (186), Expect = 2.067e-14
Identity = 42/156 (26.92%), Postives = 82/156 (52.56%), Query Frame = 2
Query:    8 SSKDFLQTLLELQQQGDYSLSMD-QIKALFM---DVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLE 463
            S +DF+ + L   Q+ + + + +  +K L M   ++    T+T S T+ +    L++ PEV  K   E+++V+ ++   +    AK+PY EA++ E  R     P+  + R +  +    + +PKG+ +F    ++ R+P  + NP+DF P  FL+
Sbjct:  263 SPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYTEAVIHEIQRFGDMLPMGLAHRVNKDTKFRDFFLPKGTEVFPMLGSVLRDPRFFSNPRDFNPQHFLD 418          

HSP 2 Score: 24.6386 bits (52), Expect = 2.067e-14
Identity = 14/48 (29.17%), Postives = 23/48 (47.92%), Query Frame = 3
Query:  501 YLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGTK-FDLSDK 641
            ++PF  G+R C G  LA   +      ++  F +  P+  K  D+S K
Sbjct:  429 FVPFSIGKRYCFGEGLARMELFLFFTTIMQNFRFKSPQSPKDIDVSPK 476          
BLAST of DY257378 vs. ExPASy Swiss-Prot
Match: C11B1_PIG (Cytochrome P450 11B1, mitochondrial OS=Sus scrofa GN=CYP11B1 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.477e-14
Identity = 45/135 (33.33%), Postives = 76/135 (56.30%), Query Frame = 2
Query:   62 SLSMDQIKALFMDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLED 466
            ++++D IKA  +D+  GS DTT+  +   + EL + PEV +  R E     AR S   +  + +LP L A +KETLRL+ P  +   R  ++   L  Y IP G+ + +  +++ RNP V+  P+ + P R+L++
Sbjct:  298 NMTVDAIKANSIDLTAGSVDTTAYPLLMTLFELARNPEVQQALRQESLAAAARISENPQKAITELPLLRAALKETLRLY-PVGIFLDRCVTSDLVLQNYHIPAGTLVKVLLYSLGRNPAVFARPERYHPQRWLDN 431          
BLAST of DY257378 vs. ExPASy Swiss-Prot
Match: CP4FN_HUMAN (Cytochrome P450 4F22 OS=Homo sapiens GN=CYP4F22 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.680e-14
Identity = 45/153 (29.41%), Postives = 73/153 (47.71%), Query Frame = 2
Query:   17 DFLQTLLELQQQGDYSLSMDQIKALFMDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFH---LAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLED 466
            DF+  LL  + +    LS + I+A          DTTS  + W +  L + PE   K R E+++V+ +   +EE     L +LP+    +KE+LR +PP  L++ +         G  IPKG    ++ +    NP VW + + + P RF  D
Sbjct:  304 DFIDVLLLARDEDGKELSDEDIRAEADTFMFEGHDTTSSGISWMLFNLAKYPEYQEKCREEIQEVM-KGRELEELEWDDLTQLPFTTMCIKESLRQYPPVTLVSRQCTEDIKLPDGRIIPKGIICLVSIYGTHHNPTVWPDSKVYNPYRFDPD 455          

HSP 2 Score: 25.7942 bits (55), Expect = 2.680e-14
Identity = 19/64 (29.69%), Postives = 28/64 (43.75%), Query Frame = 3
Query:  501 YLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGTKFDLSDKLLMALKKSEPLVVIPTP 692
            Y+PF +G R C G   A   +  V+A  L  F  S+    K     +L++  +    L V P P
Sbjct:  465 YVPFSAGPRNCIGQSFAMAELRVVVALTLLRFRLSVDRTRKVRRKPELILRTENGLWLKVEPLP 528          
BLAST of DY257378 vs. ExPASy Swiss-Prot
Match: C4D20_DROME (Probable cytochrome P450 4d20 OS=Drosophila melanogaster GN=Cyp4d20 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.683e-14
Identity = 40/118 (33.90%), Postives = 67/118 (56.78%), Query Frame = 2
Query:  119 DTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSV--VEEFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLED 466
            DTTS  V  A+  + + PEV ++   EL++V+  D+   V +  L  L YL+ ++KET+RL+PP P +  R       +   TIP  ++I++  +   R+   + +P  F+P+RFLED
Sbjct:  319 DTTSSGVSHALYAIARHPEVQQRIFEELQRVLGPDASAPVTQAQLQDLKYLDCVIKETMRLYPPVPAI-GRHAQKELEIGDKTIPANTSIYLVLYYAHRDANYFPDPLSFRPERFLED 435          

HSP 2 Score: 26.1794 bits (56), Expect = 2.683e-14
Identity = 20/69 (28.99%), Postives = 33/69 (47.83%), Query Frame = 3
Query:  489 NNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGTKFDLSDKLLMALKKSEPLVVIPTPR 695
            N F Y+PF +G + C G   A   +  +++ +L  +E  LP G   +L   L   L+ +  + V   PR
Sbjct:  441 NTFAYVPFSAGPKNCIGQKFAVLEMKVLISKVLRFYE-LLPLGE--ELKPMLNFILRSASGINVGLRPR 506          
The following BLAST results are available for this feature:
BLAST of DY257378 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CP3A8_MACFA1.590e-1428.39Cytochrome P450 3A8 OS=Macaca fascicularis GN=CYP3... [more]
CP2R1_MOUSE1.590e-1428.69Vitamin D 25-hydroxylase OS=Mus musculus GN=Cyp2r1... [more]
CP3AV_MESAU1.590e-1428.30Cytochrome P450 3A31 OS=Mesocricetus auratus GN=CY... [more]
CP51_WHEAT1.594e-1427.39Obtusifoliol 14-alpha demethylase (Fragment) OS=Tr... [more]
C11B2_RAT1.896e-1432.89Cytochrome P450 11B2, mitochondrial OS=Rattus norv... [more]
CP3AF_CAVPO2.066e-1428.39Cytochrome P450 3A15 OS=Cavia porcellus GN=CYP3A15... [more]
CP2AD_HUMAN2.067e-1426.92Cytochrome P450 2A13 OS=Homo sapiens GN=CYP2A13 PE... [more]
C11B1_PIG2.477e-1433.33Cytochrome P450 11B1, mitochondrial OS=Sus scrofa ... [more]
CP4FN_HUMAN2.680e-1429.41Cytochrome P450 4F22 OS=Homo sapiens GN=CYP4F22 PE... [more]
C4D20_DROME2.683e-1433.90Probable cytochrome P450 4d20 OS=Drosophila melano... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK2BB05FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257378 ID=DY257378; Name=DY257378; organism=Citrus sinensis; type=EST; length=899bp
GGGGAAGTCGAGCAAAGATTTTCTGCAAACCTTGTTGGAGCTTCAGCAGC
AAGGAGATTATTCCTTATCCATGGACCAAATTAAGGCCTTGTTTATGGAT
GTTGCTATTGGAAGTACGGATACAACATCAATCACTGTAGAGTGGGCGAT
GTCAGAGCTGTTGCAGAAACCGGAGGTAATGAGAAAAGCCCGCAACGAAC
TGGAGCAAGTGGTGGCACGTGACAGTGTTGTGGAAGAATTTCATCTTGCC
AAATTGCCTTACTTGGAAGCAATTGTAAAAGAGACATTAAGATTGCATCC
ACCCGCGCCGCTTCTAACCTCGCGAAGGCCTAGTGCAACTAGCAACTTGT
CTGGGTATACAATTCCCAAGGGCTCAACAATTTTCATCAACGCGTGGGCG
ATACAGAGGAATCCTGAGGTATGGGAAAATCCCCAAGATTTTCAACCTGA
TAGGTTCTTGGAAGATGTCAAAACGTGATTTTCGAGGAAACAATTTCAAT
TATCTTCCATTTGGTTCCGGGAGGAGGATTTGTCCTGGAATTCCTCTAGC
AGAGAAGATTGTCCCTCATGTATTAGCCAACCTATTGCATCTTTTTGAGT
GGAGTTTGCCTGAGGGAACAAAGTTTGATCTTTCCGATAAGCTTTTAATG
GCACTGAAAAAGTCGGAGCCACTTGTGGTCATCCCAACTCCAAGATCACT
CTCTGCTTTAGAGCATTGCAATTAATCACTGTTGTTTTAGATTTCAAACA
AGTATTGTGCCATATTCTTGCTTTTGTACTGGAAGAAAGCAAAAACTTTG
TTTTATAGACCGCTTATAATTTGCTTTCTACCATAAACGACGTTTGGTTG
TGCTTGGACATGATTTCAAGATTTAATGTACTCCTATGTTATTTGGGGC
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